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The map label for this gene is ypfJ [H]

Identifier: 209550291

GI number: 209550291

Start: 2753056

End: 2753976

Strand: Reverse

Name: ypfJ [H]

Synonym: Rleg2_2711

Alternate gene names: 209550291

Gene position: 2753976-2753056 (Counterclockwise)

Preceding gene: 209550293

Following gene: 209550289

Centisome position: 60.69

GC content: 63.63

Gene sequence:

>921_bases
ATGGAATGGAGAGGCCGGCGTCAGTCCGACAATATCGAGGATCGCCGCGGCGATCCGGGCAGCGGCGGTTTCGGCCGCGG
CGGTGGCTTCAACTTTCCCTCCGGCGGCGGCGTTCGCCGCGCTGGCGGCGGCTTGAGCATCGGCACGATCATCTTCCTCG
TCGTCATCTATTTCATCTTCAAGATGATGGGCGTCGATCTGCTGCAGGTGCTCGAAGGCGGCGGCATGACGAGCGGCCCC
GGCTATGAACAGAGCCAGTCGGAAGGCACGCGGACGCCCGCCAATGATGAGATGACCGCCTTCATGCGGACCGTTCTTGC
CGAAACCGAGGATACCTGGACGGGCATCTTCCAGGCGCAAGGTCAGACCTACGAGGAGCCGCGCCTCGTGCTGTTTTCGG
GCTCGACGGCATCGGCTTGCGGCTCCGCATCGGCGGCAACCGGACCGTTCTACTGCCCCGGTGACCACAAGCTCTATCTC
GACACGGATTTCTTCCAGGAGCTTTCCAACCGGTTCGGCGCGTCCGGCGATTTCGCCGAGGCCTATGTCGTCGCTCACGA
GGTCGGCCATCACGTGCAGAACCTGCTCGGCATCCTGCCGAAGTTCAACCAGGCCCGCCAGCGCATGAGCGAGGAGGAGG
CCAACAAGATGTCGGTGCGTGTCGAGCTGCAGGCCGATTGCTTTGCCGGCATCTGGGGCAAATATACCCAGCAGAAGGGC
TTGCTGGAGTCCGGCGACCTCGAGGAAGCGCTGAACGCCGCCCAGCAGATCGGCGACGATACGCTGCAAAAGCGGTCGCA
GGGTTACGTCGTGCCCGAGAGTTTCAACCACGGCACTTCGGCGCAGCGCGTCAGATGGTTCAAGCGCGGCTTCGACAGCG
GGCAACTGTCGGCTTGCGATACGTTCTCGGGGCCGGTTTGA

Upstream 100 bases:

>100_bases
GCCGGGCCTCGCCTGCTACATGAAGCCGCTGGAATTCCAGCCGTCGACGGATATATAGATTCGTTAAGTGCAAGCACAGG
CATTGCCGGGGAGAGCGAAG

Downstream 100 bases:

>100_bases
GGTTGCTTAGCTAAGGTTTTCGTGTGTCGCCCCCTCATCCGCCTGCCGGCACCTTCTCCCCGCTGGGGCGAAGGGAGTCG
CCGCAGCGTGTCGTCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MEWRGRRQSDNIEDRRGDPGSGGFGRGGGFNFPSGGGVRRAGGGLSIGTIIFLVVIYFIFKMMGVDLLQVLEGGGMTSGP
GYEQSQSEGTRTPANDEMTAFMRTVLAETEDTWTGIFQAQGQTYEEPRLVLFSGSTASACGSASAATGPFYCPGDHKLYL
DTDFFQELSNRFGASGDFAEAYVVAHEVGHHVQNLLGILPKFNQARQRMSEEEANKMSVRVELQADCFAGIWGKYTQQKG
LLESGDLEEALNAAQQIGDDTLQKRSQGYVVPESFNHGTSAQRVRWFKRGFDSGQLSACDTFSGPV

Sequences:

>Translated_306_residues
MEWRGRRQSDNIEDRRGDPGSGGFGRGGGFNFPSGGGVRRAGGGLSIGTIIFLVVIYFIFKMMGVDLLQVLEGGGMTSGP
GYEQSQSEGTRTPANDEMTAFMRTVLAETEDTWTGIFQAQGQTYEEPRLVLFSGSTASACGSASAATGPFYCPGDHKLYL
DTDFFQELSNRFGASGDFAEAYVVAHEVGHHVQNLLGILPKFNQARQRMSEEEANKMSVRVELQADCFAGIWGKYTQQKG
LLESGDLEEALNAAQQIGDDTLQKRSQGYVVPESFNHGTSAQRVRWFKRGFDSGQLSACDTFSGPV
>Mature_306_residues
MEWRGRRQSDNIEDRRGDPGSGGFGRGGGFNFPSGGGVRRAGGGLSIGTIIFLVVIYFIFKMMGVDLLQVLEGGGMTSGP
GYEQSQSEGTRTPANDEMTAFMRTVLAETEDTWTGIFQAQGQTYEEPRLVLFSGSTASACGSASAATGPFYCPGDHKLYL
DTDFFQELSNRFGASGDFAEAYVVAHEVGHHVQNLLGILPKFNQARQRMSEEEANKMSVRVELQADCFAGIWGKYTQQKG
LLESGDLEEALNAAQQIGDDTLQKRSQGYVVPESFNHGTSAQRVRWFKRGFDSGQLSACDTFSGPV

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=302, Percent_Identity=50.9933774834437, Blast_Score=308, Evalue=2e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33269; Mature: 33269

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWRGRRQSDNIEDRRGDPGSGGFGRGGGFNFPSGGGVRRAGGGLSIGTIIFLVVIYFIF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
KMMGVDLLQVLEGGGMTSGPGYEQSQSEGTRTPANDEMTAFMRTVLAETEDTWTGIFQAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
GQTYEEPRLVLFSGSTASACGSASAATGPFYCPGDHKLYLDTDFFQELSNRFGASGDFAE
CCCCCCCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHCCCCCCHHH
AYVVAHEVGHHVQNLLGILPKFNQARQRMSEEEANKMSVRVELQADCFAGIWGKYTQQKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCC
LLESGDLEEALNAAQQIGDDTLQKRSQGYVVPESFNHGTSAQRVRWFKRGFDSGQLSACD
CCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
TFSGPV
CCCCCC
>Mature Secondary Structure
MEWRGRRQSDNIEDRRGDPGSGGFGRGGGFNFPSGGGVRRAGGGLSIGTIIFLVVIYFIF
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
KMMGVDLLQVLEGGGMTSGPGYEQSQSEGTRTPANDEMTAFMRTVLAETEDTWTGIFQAQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
GQTYEEPRLVLFSGSTASACGSASAATGPFYCPGDHKLYLDTDFFQELSNRFGASGDFAE
CCCCCCCEEEEEECCCHHHCCCCCCCCCCEECCCCCEEEECHHHHHHHHHHCCCCCCHHH
AYVVAHEVGHHVQNLLGILPKFNQARQRMSEEEANKMSVRVELQADCFAGIWGKYTQQKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCC
LLESGDLEEALNAAQQIGDDTLQKRSQGYVVPESFNHGTSAQRVRWFKRGFDSGQLSACD
CCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
TFSGPV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]