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The map label for this gene is 209550221

Identifier: 209550221

GI number: 209550221

Start: 2687512

End: 2688540

Strand: Reverse

Name: 209550221

Synonym: Rleg2_2641

Alternate gene names: NA

Gene position: 2688540-2687512 (Counterclockwise)

Preceding gene: 209550222

Following gene: 209550215

Centisome position: 59.25

GC content: 62.97

Gene sequence:

>1029_bases
ATGCGTACCTCCAAGATCGTGCATATCGTCAGCTGCCATGCCGAAGGTGAGGTCGGCGACGTCATCGTTGGCGGCGTCGC
GCCGCCTCCGGGCGCTACGGTCTGGGAGCAGTCGCGGTGGATTGCCGAGGATGAGACGCTTCGAAACTTCGTGCTGAACG
AACCCCGCGGCGGCGTGTTCCGCCATGTCAACCTGCTTGTCCCGCCGAAGAATCCCAAGGCGCAGATGGGCTGGATCATC
ATGGAGCCGGCCGACACCCCTCCGATGTCGGGTTCAAACTCCATGTGCGTGTCGACCGTGCTGCTCGATACCGGCATCAT
CCCGATGCAAGAGCCAGTCACGCGCATGATCCTCGAGCCGCCGGGCGGCCTGATCGAGGTCGAGGCCGAGTGCCGCAACG
GCAAGGCCGAACGCATCCGCGTCCGCAACGTCCCGTCCTTTGCCGACAAGCTCGATGCCAGCATTGAGGTAGAAGGTATC
GGCACGGTCACGGTCGACACGGCCTACGGCGGGGACAGTTTCGTCATCGTCGATGCGGCGTCCATAGGGCTCAGCCTTCG
ACCGGACCATGCCCGCGATATCGCCCGCATGGGCGTCAAGATCACCGAAGCCGCCAACGAGCAGCTCGGCTTCAAGCACC
CCGCCAACGACTGGGGCCATATCTCCTTCTGCCAGATCACCGATCCGGTCGAGATGAGGGATGGCGTGTTCTGGGGTAAG
AATGCGGTCGCCATCCGTCCGGGCAAGATAGACCGTTCCCCCTGCGGTACCGGATGCTCGGCTCGCATGGCCGTGCTCCA
CGCCAAGGGCCAGATGAAGGCAGGCGAAAAGTTTGTCGGCACCTCGCTGCTGGACACGGAATTCCATTGCAGCATCGATA
GCGAAGTTGACATCAACGGCAAGCCCGGCATCATCCCGATTATCTCGGGTCGCGCATGGGTCATCGGCACGAAGCAGCTC
ATGGTCGATCCGGCCGATCCGTTCCAGGCCGGCTACCGCCTCTCCGACACCTGGCCGATGGACCTTTAA

Upstream 100 bases:

>100_bases
GCCTTCTTCACGAGATTTTCATGCGGTTCCGGCCGCAAAACTGCTGCACGCCTTTGCTGGAAGTGCTCAGGTCTCGAAAA
ATAAGCGCGGGGAACATCAA

Downstream 100 bases:

>100_bases
AGAGGCGACTATACCGCTAAGCAACGAAAAAGGCGCCGTTTTTTGCGGCGCCTTTTGCATGGGTGGTTCGTCAAGCTCAG
TCGCGGATAACCAGCAGATC

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRTSKIVHIVSCHAEGEVGDVIVGGVAPPPGATVWEQSRWIAEDETLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWII
MEPADTPPMSGSNSMCVSTVLLDTGIIPMQEPVTRMILEPPGGLIEVEAECRNGKAERIRVRNVPSFADKLDASIEVEGI
GTVTVDTAYGGDSFVIVDAASIGLSLRPDHARDIARMGVKITEAANEQLGFKHPANDWGHISFCQITDPVEMRDGVFWGK
NAVAIRPGKIDRSPCGTGCSARMAVLHAKGQMKAGEKFVGTSLLDTEFHCSIDSEVDINGKPGIIPIISGRAWVIGTKQL
MVDPADPFQAGYRLSDTWPMDL

Sequences:

>Translated_342_residues
MRTSKIVHIVSCHAEGEVGDVIVGGVAPPPGATVWEQSRWIAEDETLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWII
MEPADTPPMSGSNSMCVSTVLLDTGIIPMQEPVTRMILEPPGGLIEVEAECRNGKAERIRVRNVPSFADKLDASIEVEGI
GTVTVDTAYGGDSFVIVDAASIGLSLRPDHARDIARMGVKITEAANEQLGFKHPANDWGHISFCQITDPVEMRDGVFWGK
NAVAIRPGKIDRSPCGTGCSARMAVLHAKGQMKAGEKFVGTSLLDTEFHCSIDSEVDINGKPGIIPIISGRAWVIGTKQL
MVDPADPFQAGYRLSDTWPMDL
>Mature_342_residues
MRTSKIVHIVSCHAEGEVGDVIVGGVAPPPGATVWEQSRWIAEDETLRNFVLNEPRGGVFRHVNLLVPPKNPKAQMGWII
MEPADTPPMSGSNSMCVSTVLLDTGIIPMQEPVTRMILEPPGGLIEVEAECRNGKAERIRVRNVPSFADKLDASIEVEGI
GTVTVDTAYGGDSFVIVDAASIGLSLRPDHARDIARMGVKITEAANEQLGFKHPANDWGHISFCQITDPVEMRDGVFWGK
NAVAIRPGKIDRSPCGTGCSARMAVLHAKGQMKAGEKFVGTSLLDTEFHCSIDSEVDINGKPGIIPIISGRAWVIGTKQL
MVDPADPFQAGYRLSDTWPMDL

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=345, Percent_Identity=26.0869565217391, Blast_Score=124, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36956; Mature: 36956

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSKIVHIVSCHAEGEVGDVIVGGVAPPPGATVWEQSRWIAEDETLRNFVLNEPRGGVF
CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
RHVNLLVPPKNPKAQMGWIIMEPADTPPMSGSNSMCVSTVLLDTGIIPMQEPVTRMILEP
EEEEEEECCCCCCCEECEEEECCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHHEECC
PGGLIEVEAECRNGKAERIRVRNVPSFADKLDASIEVEGIGTVTVDTAYGGDSFVIVDAA
CCCEEEEEEECCCCCEEEEEEECCCCHHHHCCCEEEEEECEEEEEEEECCCCEEEEEEEE
SIGLSLRPDHARDIARMGVKITEAANEQLGFKHPANDWGHISFCQITDPVEMRDGVFWGK
CCCEEECCHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEECC
NAVAIRPGKIDRSPCGTGCSARMAVLHAKGQMKAGEKFVGTSLLDTEFHCSIDSEVDING
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCEEECCEEEECCCCEEECCC
KPGIIPIISGRAWVIGTKQLMVDPADPFQAGYRLSDTWPMDL
CCCEEEEECCCEEEEECCEEEECCCCHHHHCCEECCCCCCCC
>Mature Secondary Structure
MRTSKIVHIVSCHAEGEVGDVIVGGVAPPPGATVWEQSRWIAEDETLRNFVLNEPRGGVF
CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
RHVNLLVPPKNPKAQMGWIIMEPADTPPMSGSNSMCVSTVLLDTGIIPMQEPVTRMILEP
EEEEEEECCCCCCCEECEEEECCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHHEECC
PGGLIEVEAECRNGKAERIRVRNVPSFADKLDASIEVEGIGTVTVDTAYGGDSFVIVDAA
CCCEEEEEEECCCCCEEEEEEECCCCHHHHCCCEEEEEECEEEEEEEECCCCEEEEEEEE
SIGLSLRPDHARDIARMGVKITEAANEQLGFKHPANDWGHISFCQITDPVEMRDGVFWGK
CCCEEECCHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEECC
NAVAIRPGKIDRSPCGTGCSARMAVLHAKGQMKAGEKFVGTSLLDTEFHCSIDSEVDING
CEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCEEECCEEEECCCCEEECCC
KPGIIPIISGRAWVIGTKQLMVDPADPFQAGYRLSDTWPMDL
CCCEEEEECCCEEEEECCEEEECCCCHHHHCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]