| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550208
Identifier: 209550208
GI number: 209550208
Start: 2672042
End: 2672881
Strand: Reverse
Name: 209550208
Synonym: Rleg2_2628
Alternate gene names: NA
Gene position: 2672881-2672042 (Counterclockwise)
Preceding gene: 209550210
Following gene: 209550207
Centisome position: 58.9
GC content: 65.12
Gene sequence:
>840_bases ATGATCGAATTTGCCGCTGCAAGCGGGCCGCGCCTGATGCTCGATGAAACATCGGTGCTGGATATCGGCGGCTGCATCGT CGAAGGCGTCGATATCGCGCCGAAACGCGCCATTCCCGACGATGGCGATCCGCGAATCGATCACTCGCTCGAAGGCTTCC TGTTCACCTGCGGGCCGGACCATATCCGCCACCGCCAGCCGATCGTCGGTAGCGCCGAGGGCAAGGTCTATCCGCTGCAC GGATCGGCCTCCGGCCATGCAGCCAAGGTGCTGTGGACGAACTTCGAGAACGGCAATGCCGAATGCCGCGCCGATATCGA TATCGTGACTGTCGAGGGTCTGCCGCAGCGCATCGAGCGGCTGTGGCGGATCGACGGGGAGACCGGCGAGGTGTTGCTCG AGGACCGGGTCGTCAATACCAGCGACCAGACGGTGCCGACCTTCCTGATGTATCACATGAACGCCGGCGGCAAATGGCTG GACGAGGGCACACGGCTCGAAGGCCGGATGCTGGAGCATGGCGGTTTCCCCTGGACATTCGGCGAGGAGCCGGGCGGCAT CTTCTGCGTGCCGGCGCCGGCGATGGAGGAGGGCTTCGCCGAAGTCCGGCTCGGGCCCATCGCCGCGATCGGCGGCAGGA CGCTCCGCGTGCGCTTCCGCGCCGACACGCTGCCTTATCTGCAGGTCTGGCGAAACCAGAAGGCGCCGGCCCATATCATC GGCATCGAGCCGGTTTCGCATCGCTGGGTCACGCGTGACGAGCTTCAGGCGGCCGGCGAGTTCAACATGCTGGCATCAGG CGAGAGCCGCAGCTATGGGCTGAGCTTTGCCTTCCTGTGA
Upstream 100 bases:
>100_bases ATGGTTGCGGCAAAAGCGCAAGAGAGGAAAAGGGTTCGATTGACGAAAGACGGCGCAAAATCTAACGCTACTCGGCCGAT AAGCCGCTGAGGAGACTGCG
Downstream 100 bases:
>100_bases GCGAAGTGTTGTTGACGCTTGCCAAGCTGCGTCGTAGACCTTCAGCCCACCATTTTTGAGGAGACAGGACGATGGATATT CGCCAGATCGACGATGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MIEFAAASGPRLMLDETSVLDIGGCIVEGVDIAPKRAIPDDGDPRIDHSLEGFLFTCGPDHIRHRQPIVGSAEGKVYPLH GSASGHAAKVLWTNFENGNAECRADIDIVTVEGLPQRIERLWRIDGETGEVLLEDRVVNTSDQTVPTFLMYHMNAGGKWL DEGTRLEGRMLEHGGFPWTFGEEPGGIFCVPAPAMEEGFAEVRLGPIAAIGGRTLRVRFRADTLPYLQVWRNQKAPAHII GIEPVSHRWVTRDELQAAGEFNMLASGESRSYGLSFAFL
Sequences:
>Translated_279_residues MIEFAAASGPRLMLDETSVLDIGGCIVEGVDIAPKRAIPDDGDPRIDHSLEGFLFTCGPDHIRHRQPIVGSAEGKVYPLH GSASGHAAKVLWTNFENGNAECRADIDIVTVEGLPQRIERLWRIDGETGEVLLEDRVVNTSDQTVPTFLMYHMNAGGKWL DEGTRLEGRMLEHGGFPWTFGEEPGGIFCVPAPAMEEGFAEVRLGPIAAIGGRTLRVRFRADTLPYLQVWRNQKAPAHII GIEPVSHRWVTRDELQAAGEFNMLASGESRSYGLSFAFL >Mature_279_residues MIEFAAASGPRLMLDETSVLDIGGCIVEGVDIAPKRAIPDDGDPRIDHSLEGFLFTCGPDHIRHRQPIVGSAEGKVYPLH GSASGHAAKVLWTNFENGNAECRADIDIVTVEGLPQRIERLWRIDGETGEVLLEDRVVNTSDQTVPTFLMYHMNAGGKWL DEGTRLEGRMLEHGGFPWTFGEEPGGIFCVPAPAMEEGFAEVRLGPIAAIGGRTLRVRFRADTLPYLQVWRNQKAPAHII GIEPVSHRWVTRDELQAAGEFNMLASGESRSYGLSFAFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30661; Mature: 30661
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEFAAASGPRLMLDETSVLDIGGCIVEGVDIAPKRAIPDDGDPRIDHSLEGFLFTCGPD CEEEECCCCCEEEEECCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCH HIRHRQPIVGSAEGKVYPLHGSASGHAAKVLWTNFENGNAECRADIDIVTVEGLPQRIER HHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCHHHHHH LWRIDGETGEVLLEDRVVNTSDQTVPTFLMYHMNAGGKWLDEGTRLEGRMLEHGGFPWTF HHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEECCCCCEEC GEEPGGIFCVPAPAMEEGFAEVRLGPIAAIGGRTLRVRFRADTLPYLQVWRNQKAPAHII CCCCCCEEEECCCHHHCCHHHEEECEEEEECCEEEEEEEECCCCHHHHHHCCCCCCEEEE GIEPVSHRWVTRDELQAAGEFNMLASGESRSYGLSFAFL ECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MIEFAAASGPRLMLDETSVLDIGGCIVEGVDIAPKRAIPDDGDPRIDHSLEGFLFTCGPD CEEEECCCCCEEEEECCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCH HIRHRQPIVGSAEGKVYPLHGSASGHAAKVLWTNFENGNAECRADIDIVTVEGLPQRIER HHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCHHHHHH LWRIDGETGEVLLEDRVVNTSDQTVPTFLMYHMNAGGKWLDEGTRLEGRMLEHGGFPWTF HHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEECCCCCEEC GEEPGGIFCVPAPAMEEGFAEVRLGPIAAIGGRTLRVRFRADTLPYLQVWRNQKAPAHII CCCCCCEEEECCCHHHCCHHHEEECEEEEECCEEEEEEEECCCCHHHHHHCCCCCCEEEE GIEPVSHRWVTRDELQAAGEFNMLASGESRSYGLSFAFL ECCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA