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The map label for this gene is soxA [H]

Identifier: 209550185

GI number: 209550185

Start: 2647348

End: 2648535

Strand: Reverse

Name: soxA [H]

Synonym: Rleg2_2605

Alternate gene names: 209550185

Gene position: 2648535-2647348 (Counterclockwise)

Preceding gene: 209550186

Following gene: 209550184

Centisome position: 58.36

GC content: 64.9

Gene sequence:

>1188_bases
ATGGCAGTCGATTTCAGGTTCATCATCATCGGGCGCGGCATGATGGGGGCGGCTGCCGCAAGGCATCTCGCCTCGATGGC
CGACGGCATTGCGCTGATCGGCCCGCGCGAGCCGGAGCAACGCAAGGCCCATCATGGGATATTCGCCAGCCATTACGACG
AAGCGCGCATCACCCGCACCTTCGACGGCAATCTGGCCTGGGGAAGTTTCGCCGCCCGTGCGCTCGACCGCTACCGCGAG
ATCGAGGCAAGGAGCGGCATCTCCTTCTATTCGGAAGTCGGCTGCCTCTTTGCCGGTCCGCCGCCCAAGGATGAGCAAGA
CTATATCAACCGGGCGCTCACCGTCAGCCGGACGCTCGGCAGCGATGTCGAGACCATCGCGCCGTCGGACCTTCGCCAGC
GTTTTTCCTATCTTGCCGTCAATCCTGAATTCACCGGATATTTCGAGCGCAAGCGCGCCGGCCACATCAACCCGCGGGCG
CTGGTGCGGGCGCAGGCGAAGCTTGCCGAACAGGGCGGCGTGTCGCTGATCGAGGCAACCGCGACATCCGTGCGCGACGC
CGGTTCCCATGTCGAAGTGGCGGCCGGCGGCAGAAGCTACAGCGCCGAGCGCGTACTGGTCGCGGCCGGCGGTTTCAGCA
ACTTCCACGCCCTGCTGCCGCGTCCGGTCGATACCAGGGTGATGGCGCGCACGGTCGCTTTCTATGAGATCGGCGAGCGC
GAGATGGCAATCTTCGGCGATATGCCGTCGACGATCGTGCTCGGCGACCGTGAGGAGGATCACATCTATATCCTGCCGCC
GGTGCGTTATCCCGACGGCAAGATCTATCTGAAGCTCGGCGGCGATACCGAGATGCTTTCTTTCAGTGAGCTGGAGGACG
TCGGCGCGTGGTTCCGTTCCGATGGCAGCGTGGCCGAGCGCGAGCATCTCTCGCGCATCGCCCTGGCGTTGATGCCAGCA
CTGGCCGGCTGCCCGGTGACCTCGGGGCCGTGCGTGGCGAATTTCACGCCCACCGGTTATCCCTATGCCGGATTTACGCA
GTCGCCGCGCATCGCGGTGCTCACCGGCGGCAATTTCGTCGCGGCCAAATCCTCCGACGAACTGGGGCGATTGGGGGCCG
TGCTGCTGACCGAAGGGGCGCTCGGCGACAAGGATTTCGGCGGCGAGTTGACGCCGGTCTTTGCCTGA

Upstream 100 bases:

>100_bases
TTTTTGCGATATGAATCAGGATGCTTGCCGTGATATCCCCACCTGAAACGAGGTGGGCCACCTCGATATGGGGTTAGGCC
ACCTCGAGACGAGGTTAGGT

Downstream 100 bases:

>100_bases
AAGGGAGCATCATGGCAGTCGATTTCAAATATATCGTCGTCGGCCGCGGGCTGATGGGGGCCGCGGCGGCGCGGCATCTG
GCGCGACAAGTGGATGGCGT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: MSOX [H]

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MAVDFRFIIIGRGMMGAAAARHLASMADGIALIGPREPEQRKAHHGIFASHYDEARITRTFDGNLAWGSFAARALDRYRE
IEARSGISFYSEVGCLFAGPPPKDEQDYINRALTVSRTLGSDVETIAPSDLRQRFSYLAVNPEFTGYFERKRAGHINPRA
LVRAQAKLAEQGGVSLIEATATSVRDAGSHVEVAAGGRSYSAERVLVAAGGFSNFHALLPRPVDTRVMARTVAFYEIGER
EMAIFGDMPSTIVLGDREEDHIYILPPVRYPDGKIYLKLGGDTEMLSFSELEDVGAWFRSDGSVAEREHLSRIALALMPA
LAGCPVTSGPCVANFTPTGYPYAGFTQSPRIAVLTGGNFVAAKSSDELGRLGAVLLTEGALGDKDFGGELTPVFA

Sequences:

>Translated_395_residues
MAVDFRFIIIGRGMMGAAAARHLASMADGIALIGPREPEQRKAHHGIFASHYDEARITRTFDGNLAWGSFAARALDRYRE
IEARSGISFYSEVGCLFAGPPPKDEQDYINRALTVSRTLGSDVETIAPSDLRQRFSYLAVNPEFTGYFERKRAGHINPRA
LVRAQAKLAEQGGVSLIEATATSVRDAGSHVEVAAGGRSYSAERVLVAAGGFSNFHALLPRPVDTRVMARTVAFYEIGER
EMAIFGDMPSTIVLGDREEDHIYILPPVRYPDGKIYLKLGGDTEMLSFSELEDVGAWFRSDGSVAEREHLSRIALALMPA
LAGCPVTSGPCVANFTPTGYPYAGFTQSPRIAVLTGGNFVAAKSSDELGRLGAVLLTEGALGDKDFGGELTPVFA
>Mature_394_residues
AVDFRFIIIGRGMMGAAAARHLASMADGIALIGPREPEQRKAHHGIFASHYDEARITRTFDGNLAWGSFAARALDRYREI
EARSGISFYSEVGCLFAGPPPKDEQDYINRALTVSRTLGSDVETIAPSDLRQRFSYLAVNPEFTGYFERKRAGHINPRAL
VRAQAKLAEQGGVSLIEATATSVRDAGSHVEVAAGGRSYSAERVLVAAGGFSNFHALLPRPVDTRVMARTVAFYEIGERE
MAIFGDMPSTIVLGDREEDHIYILPPVRYPDGKIYLKLGGDTEMLSFSELEDVGAWFRSDGSVAEREHLSRIALALMPAL
AGCPVTSGPCVANFTPTGYPYAGFTQSPRIAVLTGGNFVAAKSSDELGRLGAVLLTEGALGDKDFGGELTPVFA

Specific function: Catalyzes the oxidative demethylation of sarcosine [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MSOX/MTOX family. MSOX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR006281 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.5.3.1 [H]

Molecular weight: Translated: 42642; Mature: 42511

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDFRFIIIGRGMMGAAAARHLASMADGIALIGPREPEQRKAHHGIFASHYDEARITRT
CCEEEEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCHHHCCCCCEEEEE
FDGNLAWGSFAARALDRYREIEARSGISFYSEVGCLFAGPPPKDEQDYINRALTVSRTLG
ECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCCHHHHHHHHHEEHHHHC
SDVETIAPSDLRQRFSYLAVNPEFTGYFERKRAGHINPRALVRAQAKLAEQGGVSLIEAT
CCCHHCCCHHHHHHHHEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEHH
ATSVRDAGSHVEVAAGGRSYSAERVLVAAGGFSNFHALLPRPVDTRVMARTVAFYEIGER
HHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHEECCCC
EMAIFGDMPSTIVLGDREEDHIYILPPVRYPDGKIYLKLGGDTEMLSFSELEDVGAWFRS
EEEEECCCCCEEEECCCCCCEEEEECCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
DGSVAEREHLSRIALALMPALAGCPVTSGPCVANFTPTGYPYAGFTQSPRIAVLTGGNFV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCEE
AAKSSDELGRLGAVLLTEGALGDKDFGGELTPVFA
EECCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVDFRFIIIGRGMMGAAAARHLASMADGIALIGPREPEQRKAHHGIFASHYDEARITRT
CEEEEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCHHHCCCCCEEEEE
FDGNLAWGSFAARALDRYREIEARSGISFYSEVGCLFAGPPPKDEQDYINRALTVSRTLG
ECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCCHHHHHHHHHEEHHHHC
SDVETIAPSDLRQRFSYLAVNPEFTGYFERKRAGHINPRALVRAQAKLAEQGGVSLIEAT
CCCHHCCCHHHHHHHHEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEHH
ATSVRDAGSHVEVAAGGRSYSAERVLVAAGGFSNFHALLPRPVDTRVMARTVAFYEIGER
HHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHEECCCC
EMAIFGDMPSTIVLGDREEDHIYILPPVRYPDGKIYLKLGGDTEMLSFSELEDVGAWFRS
EEEEECCCCCEEEECCCCCCEEEEECCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
DGSVAEREHLSRIALALMPALAGCPVTSGPCVANFTPTGYPYAGFTQSPRIAVLTGGNFV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCEE
AAKSSDELGRLGAVLLTEGALGDKDFGGELTPVFA
EECCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9563845; 7887617; 8779579; 11035956 [H]