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The map label for this gene is ycgB [H]

Identifier: 209550141

GI number: 209550141

Start: 2595369

End: 2596919

Strand: Reverse

Name: ycgB [H]

Synonym: Rleg2_2559

Alternate gene names: 209550141

Gene position: 2596919-2595369 (Counterclockwise)

Preceding gene: 209550142

Following gene: 209550140

Centisome position: 57.23

GC content: 59.19

Gene sequence:

>1551_bases
ATGAACACGACGATGAGGCCAAGAGAGCGGCTGTTGTTCGAGGGGGCCGACTGGGACTTTTCGACGCTCCAACGCATCCA
CGACGCCTGCGAGGAAATCGCGCTCGGCGAACTCGGCCTCGACGTCTATCCGAACCAGATCGAAGTCATCACCTCTGAGC
AGATGCTGGATGCCTATTCCTCGACCGGCATGCCGCTGTTTTACCGCCATTGGTCCTTCGGCAAACATTTCGCGCATCAC
GAAGCCTTCTACCGCCGCGGCATGCGCGACCTCGCCTATGAGATCGTCATCAACAGCTCTCCCTGCATCTCCTATCTGAT
GGAGGAGAATACGGCGACGATGCAAACGCTCGTCACCGCGCATGCGGCCTTCGGGCACAACCATTTCTTCAAGAACAATT
ATCTCTTCAAGCTCTGGACGGATGCGGAAGGAATCCTCGATTACCTCGATTTTGCCAAAGGTTATATCACCCGCTGCGAA
GAGCGTTATGGCGAGACGGCCGTCGAGCGGACGCTCGATGCGGCGCATGCGCTGATGTCGCACGGGGTGCATCGCTACGC
GGGCAAGACCACCATCGACCTTCGCCAGGAGGAGAAGCGGCAGCAGGAGCGCCGCGCCCACGAAGAGCAGATGTTCAACG
ATCTGTGGCGCACGGTTCCCGTCGGCAAGGCCAAAAAGGCAAGCGACGGCGGCCTGGAAAAGCGCCGCGCCGCACTCGGT
CTTCCGCAGGACAACATCCTCTATTTTCTTGAGAAAACTGCGCCGCGGCTGCAGCCTTGGCAGCGTGAGATCCTTCGCAT
CGTCCGCCATGTCGCCCAATATTTCCATCCCCAGCGGCAGACCAAGGTGATGAATGAGGGGACGGCTACCTTCGTCCACT
ATCAGATCATGAACCGGCTCCACGAGCGGGGGCAGATCAGCGACGGCAACTTCCTCGAATTCTTGAAGTCGCACTCCAAC
GTTGTGTTCCAACCGAGCTACGACGATCGGCGGTTCTCGGGCTTCAACCCCTATGCGCTCGGTTTTGCGATGATGCAGGA
TATCGAGAGAATCGTCACGAAGCCGACGGACGAAGACCGCACATGGTTTCCCGATATCGCCGGCCGCGGTGATGCGATGC
CCGTCCTGCGCGATATCTGGGCCAATTACCGGGACGAGAGTTTCATCAGCCAATTCCTCAGCCCGAACCTGATCCGCCAG
TTGCGGCTGTTCCATCTCTATGACGACCCGGAACAGACCGAGGGGGTGCTGGTTTCGGCGATCCACAATGAGCGCGGATA
TCTGCGCATCCGCCGCCAGCTTTCCCGCGAATACGATATCGGCTGGACCGATCCGGCAATCGATATCGTCGATGTCGATC
TTGCCGGCGACCGCCGCCTGCTGCTGCAACATATCATGATGAGCGGCAGCTATCTTCAGGAGGCCGACACGAGGGCTGTC
CTGCAGCACCTCGCCGATCTCTGGGGCTACGACGTGCTGCTTCAGGAAATCGATAGTTCGAACAGCGTGGCGAGGGAGCA
CACGGCGAGCCCGCGCAAGATCGTTCAATGA

Upstream 100 bases:

>100_bases
TGCTGCCGCTTTCGATGCGCAAAGTCTGCCGGCGAAGCGAAATATTCCCGGTTTTCCACGATCTCTTCCAGAAGCGTGAC
GCACAGTCGAGGGTGACGCC

Downstream 100 bases:

>100_bases
TCCCCGATCTTTCTCCAAGCTGCATTGGTTGCCATCGATAGTGTGCAATTATCGATGGTAACGAAGACAAAGGCTTAGTA
ACTTACCGCCGCTGCAATCG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MNTTMRPRERLLFEGADWDFSTLQRIHDACEEIALGELGLDVYPNQIEVITSEQMLDAYSSTGMPLFYRHWSFGKHFAHH
EAFYRRGMRDLAYEIVINSSPCISYLMEENTATMQTLVTAHAAFGHNHFFKNNYLFKLWTDAEGILDYLDFAKGYITRCE
ERYGETAVERTLDAAHALMSHGVHRYAGKTTIDLRQEEKRQQERRAHEEQMFNDLWRTVPVGKAKKASDGGLEKRRAALG
LPQDNILYFLEKTAPRLQPWQREILRIVRHVAQYFHPQRQTKVMNEGTATFVHYQIMNRLHERGQISDGNFLEFLKSHSN
VVFQPSYDDRRFSGFNPYALGFAMMQDIERIVTKPTDEDRTWFPDIAGRGDAMPVLRDIWANYRDESFISQFLSPNLIRQ
LRLFHLYDDPEQTEGVLVSAIHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDRRLLLQHIMMSGSYLQEADTRAV
LQHLADLWGYDVLLQEIDSSNSVAREHTASPRKIVQ

Sequences:

>Translated_516_residues
MNTTMRPRERLLFEGADWDFSTLQRIHDACEEIALGELGLDVYPNQIEVITSEQMLDAYSSTGMPLFYRHWSFGKHFAHH
EAFYRRGMRDLAYEIVINSSPCISYLMEENTATMQTLVTAHAAFGHNHFFKNNYLFKLWTDAEGILDYLDFAKGYITRCE
ERYGETAVERTLDAAHALMSHGVHRYAGKTTIDLRQEEKRQQERRAHEEQMFNDLWRTVPVGKAKKASDGGLEKRRAALG
LPQDNILYFLEKTAPRLQPWQREILRIVRHVAQYFHPQRQTKVMNEGTATFVHYQIMNRLHERGQISDGNFLEFLKSHSN
VVFQPSYDDRRFSGFNPYALGFAMMQDIERIVTKPTDEDRTWFPDIAGRGDAMPVLRDIWANYRDESFISQFLSPNLIRQ
LRLFHLYDDPEQTEGVLVSAIHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDRRLLLQHIMMSGSYLQEADTRAV
LQHLADLWGYDVLLQEIDSSNSVAREHTASPRKIVQ
>Mature_516_residues
MNTTMRPRERLLFEGADWDFSTLQRIHDACEEIALGELGLDVYPNQIEVITSEQMLDAYSSTGMPLFYRHWSFGKHFAHH
EAFYRRGMRDLAYEIVINSSPCISYLMEENTATMQTLVTAHAAFGHNHFFKNNYLFKLWTDAEGILDYLDFAKGYITRCE
ERYGETAVERTLDAAHALMSHGVHRYAGKTTIDLRQEEKRQQERRAHEEQMFNDLWRTVPVGKAKKASDGGLEKRRAALG
LPQDNILYFLEKTAPRLQPWQREILRIVRHVAQYFHPQRQTKVMNEGTATFVHYQIMNRLHERGQISDGNFLEFLKSHSN
VVFQPSYDDRRFSGFNPYALGFAMMQDIERIVTKPTDEDRTWFPDIAGRGDAMPVLRDIWANYRDESFISQFLSPNLIRQ
LRLFHLYDDPEQTEGVLVSAIHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDRRLLLQHIMMSGSYLQEADTRAV
LQHLADLWGYDVLLQEIDSSNSVAREHTASPRKIVQ

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=501, Percent_Identity=52.4950099800399, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60149; Mature: 60149

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTMRPRERLLFEGADWDFSTLQRIHDACEEIALGELGLDVYPNQIEVITSEQMLDAYS
CCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
STGMPLFYRHWSFGKHFAHHEAFYRRGMRDLAYEIVINSSPCISYLMEENTATMQTLVTA
CCCCCEEEHHCHHHHHHHHHHHHHHCCHHHHEEHHEECCCHHHHHHHHCCHHHHHHHHHH
HAAFGHNHFFKNNYLFKLWTDAEGILDYLDFAKGYITRCEERYGETAVERTLDAAHALMS
HHHHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HGVHRYAGKTTIDLRQEEKRQQERRAHEEQMFNDLWRTVPVGKAKKASDGGLEKRRAALG
CCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCC
LPQDNILYFLEKTAPRLQPWQREILRIVRHVAQYFHPQRQTKVMNEGTATFVHYQIMNRL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH
HERGQISDGNFLEFLKSHSNVVFQPSYDDRRFSGFNPYALGFAMMQDIERIVTKPTDEDR
HHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TWFPDIAGRGDAMPVLRDIWANYRDESFISQFLSPNLIRQLRLFHLYDDPEQTEGVLVSA
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEE
IHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDRRLLLQHIMMSGSYLQEADTRAV
HHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH
LQHLADLWGYDVLLQEIDSSNSVAREHTASPRKIVQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCC
>Mature Secondary Structure
MNTTMRPRERLLFEGADWDFSTLQRIHDACEEIALGELGLDVYPNQIEVITSEQMLDAYS
CCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHH
STGMPLFYRHWSFGKHFAHHEAFYRRGMRDLAYEIVINSSPCISYLMEENTATMQTLVTA
CCCCCEEEHHCHHHHHHHHHHHHHHCCHHHHEEHHEECCCHHHHHHHHCCHHHHHHHHHH
HAAFGHNHFFKNNYLFKLWTDAEGILDYLDFAKGYITRCEERYGETAVERTLDAAHALMS
HHHHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HGVHRYAGKTTIDLRQEEKRQQERRAHEEQMFNDLWRTVPVGKAKKASDGGLEKRRAALG
CCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCC
LPQDNILYFLEKTAPRLQPWQREILRIVRHVAQYFHPQRQTKVMNEGTATFVHYQIMNRL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH
HERGQISDGNFLEFLKSHSNVVFQPSYDDRRFSGFNPYALGFAMMQDIERIVTKPTDEDR
HHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
TWFPDIAGRGDAMPVLRDIWANYRDESFISQFLSPNLIRQLRLFHLYDDPEQTEGVLVSA
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEE
IHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDRRLLLQHIMMSGSYLQEADTRAV
HHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHH
LQHLADLWGYDVLLQEIDSSNSVAREHTASPRKIVQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]