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The map label for this gene is mdtA [H]

Identifier: 209550139

GI number: 209550139

Start: 2592806

End: 2594017

Strand: Reverse

Name: mdtA [H]

Synonym: Rleg2_2557

Alternate gene names: 209550139

Gene position: 2594017-2592806 (Counterclockwise)

Preceding gene: 209550140

Following gene: 209550138

Centisome position: 57.16

GC content: 63.94

Gene sequence:

>1212_bases
ATGGCCTTTTGGAAGCAGTTTATACTTTCGCTCATCGTCATTGTTGCCGGCTTTGCCGCGTGGGTTTTCTTTGCCCCGGG
CGCCGGCGACATGATGCGCGATGCGGGTATTCCAGACGGCATCGTTTCCAGGATCGCGCCGAAGGCTGAGCAGACGGCGG
ATGCCGACGCTCCCGCCCGGGCGCAAGGCCAACAGCGTGGCGAGGGGCAGGGACAGGGCCAGAACCGCCGCAATGGCGGC
GGGCGCAACGGCGCCATTCTCGTCGCAACGCAGGCGGTCGTCCAGGGCGTCGTCAACGACCGGCTGAACGCCATCGGCAC
GGGGGATGCGATCCGCTCGGTCGCGGTCACGCCGCAGGCATCGGGTACGATCCGCGAAATCCTCATCAAGTCGGGCGACA
GGGTGAAGGCCGGCCAGGTGCTCGCCAAGCTCGACAGCGAGGAGCAGGTGATTGCCCGCGGCCAGGCTGACGTGGCAGTC
AAGGCCGCCGTCGAGAAATCCAATCTCTATCACAACATCAAATCCAGCGTGTCGCGCATGGACGTGTTCGATTCCGAGAT
CGCCGAGCAGGGCGCGCGGCTGCAGCTGCAAGTCGCCGAGCTCAATCTCGCACGACGCAACATTGTTGCGCCGATCGATG
GCATCGTCGGCATCGTGCCGGTCAATATCGGCGACAATGTCACGACGAGCATTCCGATCGTCACGCTCGACGACCGTTCG
GAAATCCTCGTCGACTTCTGGGTGCCGGAGCGCTTCTCCAACACAGTGTCGGTCGGCCAGCCGGTCGAGGCGATGTCGGT
CGCAAAACCGGGGCAGGTGTTTTCCGGGGAAGTCGAAGCTGTCGACAACCGCATCGACGCGGCAAGCCGTACGCTTCGAC
TGCGCGCCCGCATCGACAACGCTTCCGACGAGCTGCGCGCCGGCATGTCCTTCAGCGTCAGCATGAAATTCCCCGGTGAC
AAATATCCGGCGGTCGATCCGCAGTCCGTGCAGTGGGATTCGCAAGGGTCCTTCGTCTGGCTGGTCAACGACGACAAGTC
GCATAAGGTGCGGGTCAGCGTCGTGCAGCGCAACCCGGACTTCGTCCTCGTCAAAGCCGATCTCAAGGACGGCGACAAGA
TCGTGACACAAGGTCTGCAGCGCGTGCGTGAGGGCGGGGCGGTGCGCGTCTCCGCCGATGTCGCCGCGAATGGCGAGGTC
GCCACGCAATGA

Upstream 100 bases:

>100_bases
GCTGTAAACGCGCGATATTGTCGCATCAGACGGGACCGTCATCCCGCAGCGCCTCTTTCGACCGACCCTGGTCCAACCTC
GAGTCCCTCCGGAGACGTGA

Downstream 100 bases:

>100_bases
GTGTGACCGAGATTCATCAGGACAGGGCCTCGGGCAAGCAGAGCTTCACCGCGCTTTTCGTTCGTCGGCCGATTCTGGCG
CTGGTGTTCAATACGCTGAT

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MAFWKQFILSLIVIVAGFAAWVFFAPGAGDMMRDAGIPDGIVSRIAPKAEQTADADAPARAQGQQRGEGQGQGQNRRNGG
GRNGAILVATQAVVQGVVNDRLNAIGTGDAIRSVAVTPQASGTIREILIKSGDRVKAGQVLAKLDSEEQVIARGQADVAV
KAAVEKSNLYHNIKSSVSRMDVFDSEIAEQGARLQLQVAELNLARRNIVAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRS
EILVDFWVPERFSNTVSVGQPVEAMSVAKPGQVFSGEVEAVDNRIDAASRTLRLRARIDNASDELRAGMSFSVSMKFPGD
KYPAVDPQSVQWDSQGSFVWLVNDDKSHKVRVSVVQRNPDFVLVKADLKDGDKIVTQGLQRVREGGAVRVSADVAANGEV
ATQ

Sequences:

>Translated_403_residues
MAFWKQFILSLIVIVAGFAAWVFFAPGAGDMMRDAGIPDGIVSRIAPKAEQTADADAPARAQGQQRGEGQGQGQNRRNGG
GRNGAILVATQAVVQGVVNDRLNAIGTGDAIRSVAVTPQASGTIREILIKSGDRVKAGQVLAKLDSEEQVIARGQADVAV
KAAVEKSNLYHNIKSSVSRMDVFDSEIAEQGARLQLQVAELNLARRNIVAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRS
EILVDFWVPERFSNTVSVGQPVEAMSVAKPGQVFSGEVEAVDNRIDAASRTLRLRARIDNASDELRAGMSFSVSMKFPGD
KYPAVDPQSVQWDSQGSFVWLVNDDKSHKVRVSVVQRNPDFVLVKADLKDGDKIVTQGLQRVREGGAVRVSADVAANGEV
ATQ
>Mature_402_residues
AFWKQFILSLIVIVAGFAAWVFFAPGAGDMMRDAGIPDGIVSRIAPKAEQTADADAPARAQGQQRGEGQGQGQNRRNGGG
RNGAILVATQAVVQGVVNDRLNAIGTGDAIRSVAVTPQASGTIREILIKSGDRVKAGQVLAKLDSEEQVIARGQADVAVK
AAVEKSNLYHNIKSSVSRMDVFDSEIAEQGARLQLQVAELNLARRNIVAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRSE
ILVDFWVPERFSNTVSVGQPVEAMSVAKPGQVFSGEVEAVDNRIDAASRTLRLRARIDNASDELRAGMSFSVSMKFPGDK
YPAVDPQSVQWDSQGSFVWLVNDDKSHKVRVSVVQRNPDFVLVKADLKDGDKIVTQGLQRVREGGAVRVSADVAANGEVA
TQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=342, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 43043; Mature: 42912

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFWKQFILSLIVIVAGFAAWVFFAPGAGDMMRDAGIPDGIVSRIAPKAEQTADADAPAR
CCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCHHHHHHCCCCCHHCCCCCCCCH
AQGQQRGEGQGQGQNRRNGGGRNGAILVATQAVVQGVVNDRLNAIGTGDAIRSVAVTPQA
HCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHEEEECCCC
SGTIREILIKSGDRVKAGQVLAKLDSEEQVIARGQADVAVKAAVEKSNLYHNIKSSVSRM
CCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH
DVFDSEIAEQGARLQLQVAELNLARRNIVAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRS
HHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCC
EILVDFWVPERFSNTVSVGQPVEAMSVAKPGQVFSGEVEAVDNRIDAASRTLRLRARIDN
EEEEEEECCHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCC
ASDELRAGMSFSVSMKFPGDKYPAVDPQSVQWDSQGSFVWLVNDDKSHKVRVSVVQRNPD
CHHHHHCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCC
FVLVKADLKDGDKIVTQGLQRVREGGAVRVSADVAANGEVATQ
EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
AFWKQFILSLIVIVAGFAAWVFFAPGAGDMMRDAGIPDGIVSRIAPKAEQTADADAPAR
CHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCHHHHHHCCCCCHHCCCCCCCCH
AQGQQRGEGQGQGQNRRNGGGRNGAILVATQAVVQGVVNDRLNAIGTGDAIRSVAVTPQA
HCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHEEEECCCC
SGTIREILIKSGDRVKAGQVLAKLDSEEQVIARGQADVAVKAAVEKSNLYHNIKSSVSRM
CCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH
DVFDSEIAEQGARLQLQVAELNLARRNIVAPIDGIVGIVPVNIGDNVTTSIPIVTLDDRS
HHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCC
EILVDFWVPERFSNTVSVGQPVEAMSVAKPGQVFSGEVEAVDNRIDAASRTLRLRARIDN
EEEEEEECCHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCC
ASDELRAGMSFSVSMKFPGDKYPAVDPQSVQWDSQGSFVWLVNDDKSHKVRVSVVQRNPD
CHHHHHCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCC
FVLVKADLKDGDKIVTQGLQRVREGGAVRVSADVAANGEVATQ
EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA