| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550038
Identifier: 209550038
GI number: 209550038
Start: 2497410
End: 2498252
Strand: Reverse
Name: 209550038
Synonym: Rleg2_2455
Alternate gene names: NA
Gene position: 2498252-2497410 (Counterclockwise)
Preceding gene: 209550039
Following gene: 209550037
Centisome position: 55.05
GC content: 61.45
Gene sequence:
>843_bases ATGACCGATGCACACGGCGTAGCCCGCGACCAACTCCGCGCCTTCATCGAGCGCATTGAGCGCCTCGAGGAGGAAAAGAA GACGATCGCCGACGACATCAAGGATGTCTATGGCGAGGCGAAGGCCATGGGCTTCATCCCGGCCATGATGAAGAAGGTCA TCGCAATCCGTAAAAAGGATGAGCAGGAGCGGGCCGAAGAGGAGGCGATCCTCGACACCTACCTGCACGCTCTCGGCATG ATCTCGCAGCCCGATTTCTTCGAAGACTATGACGGCAAGGCGGGAAAATCTAATTCGAAATCGCCAGCAATGGCGCTTCA ATCCCCGCGCAAGGCGGCGGAGGCGGTATCCGAGAGGACCGCATTTCAGGTCGATGCTCCGGCATCGGCTGAGGCCACGA TAGAGGGGCAACCTTCGGTGACCGTGGCTACCAGCGCCGAAAGCGCAGAGGACGAGCGGAATGTTGAAGCCGTTGGTGGA GCAACGCTCGTCCTCACCAATTCCGAATCGGACGACGATGCAATCGCTGCAGTGAACGGCAAGGCCGGACTGGCGAACGT CGTTGACGTTGAACCGTCGTCGTCCGGCCAGATCGATCCGAATGAGGATCGCAGCGAAGGCCACAGCCTCGGCGCCGAAC GCGCCGGCGCCAATGCAGGAGGCCACCATGTAACCGCTCAAGCAAATCGCGCCGCAACGGCCGGAGCGCTCGTTAAATCC GCTCCGGCCACCAAACCCCTCCGGCCCCACTGCCGGAACCCCGGCGAACACTGCGGCGGATATGGCAGCAATCATTGCCA TTCGTGCCTGCGCGCGGCGAAGGAATCAGAGGTGGCAGCATGA
Upstream 100 bases:
>100_bases GGAACGGCGTCATCGCCGCGGCAAGCCGCAAGAGCATCACGGGCATTGATTGGAAGTGGCTTGCTACCCGCCACACCTCA TCCAGGAAGGCCGTCTCAGC
Downstream 100 bases:
>100_bases TCACGGCTCCGCACATTCGATCCCGCGCCGAGTTGACCTCGATGATGATCGACTTCACGGCGAACGGCGGCGAGGTTCGC AAGTTCGGTCGCGGATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTDAHGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKAMGFIPAMMKKVIAIRKKDEQERAEEEAILDTYLHALGM ISQPDFFEDYDGKAGKSNSKSPAMALQSPRKAAEAVSERTAFQVDAPASAEATIEGQPSVTVATSAESAEDERNVEAVGG ATLVLTNSESDDDAIAAVNGKAGLANVVDVEPSSSGQIDPNEDRSEGHSLGAERAGANAGGHHVTAQANRAATAGALVKS APATKPLRPHCRNPGEHCGGYGSNHCHSCLRAAKESEVAA
Sequences:
>Translated_280_residues MTDAHGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKAMGFIPAMMKKVIAIRKKDEQERAEEEAILDTYLHALGM ISQPDFFEDYDGKAGKSNSKSPAMALQSPRKAAEAVSERTAFQVDAPASAEATIEGQPSVTVATSAESAEDERNVEAVGG ATLVLTNSESDDDAIAAVNGKAGLANVVDVEPSSSGQIDPNEDRSEGHSLGAERAGANAGGHHVTAQANRAATAGALVKS APATKPLRPHCRNPGEHCGGYGSNHCHSCLRAAKESEVAA >Mature_279_residues TDAHGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKAMGFIPAMMKKVIAIRKKDEQERAEEEAILDTYLHALGMI SQPDFFEDYDGKAGKSNSKSPAMALQSPRKAAEAVSERTAFQVDAPASAEATIEGQPSVTVATSAESAEDERNVEAVGGA TLVLTNSESDDDAIAAVNGKAGLANVVDVEPSSSGQIDPNEDRSEGHSLGAERAGANAGGHHVTAQANRAATAGALVKSA PATKPLRPHCRNPGEHCGGYGSNHCHSCLRAAKESEVAA
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 29476; Mature: 29345
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAHGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKAMGFIPAMMKKVIAIRKKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQERAEEEAILDTYLHALGMISQPDFFEDYDGKAGKSNSKSPAMALQSPRKAAEAVSERT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH AFQVDAPASAEATIEGQPSVTVATSAESAEDERNVEAVGGATLVLTNSESDDDAIAAVNG CEEECCCCCCCEEECCCCCEEEEECCCCCHHHCCHHHHCCEEEEEECCCCCCCEEEEECC KAGLANVVDVEPSSSGQIDPNEDRSEGHSLGAERAGANAGGHHVTAQANRAATAGALVKS CCCCCEEEECCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCEEEECCCCHHHHHHHHHC APATKPLRPHCRNPGEHCGGYGSNHCHSCLRAAKESEVAA CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDAHGVARDQLRAFIERIERLEEEKKTIADDIKDVYGEAKAMGFIPAMMKKVIAIRKKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQERAEEEAILDTYLHALGMISQPDFFEDYDGKAGKSNSKSPAMALQSPRKAAEAVSERT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH AFQVDAPASAEATIEGQPSVTVATSAESAEDERNVEAVGGATLVLTNSESDDDAIAAVNG CEEECCCCCCCEEECCCCCEEEEECCCCCHHHCCHHHHCCEEEEEECCCCCCCEEEEECC KAGLANVVDVEPSSSGQIDPNEDRSEGHSLGAERAGANAGGHHVTAQANRAATAGALVKS CCCCCEEEECCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCEEEECCCCHHHHHHHHHC APATKPLRPHCRNPGEHCGGYGSNHCHSCLRAAKESEVAA CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA