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The map label for this gene is ydaU [H]

Identifier: 209550024

GI number: 209550024

Start: 2489739

End: 2490500

Strand: Reverse

Name: ydaU [H]

Synonym: Rleg2_2441

Alternate gene names: 209550024

Gene position: 2490500-2489739 (Counterclockwise)

Preceding gene: 209550025

Following gene: 209550023

Centisome position: 54.88

GC content: 59.19

Gene sequence:

>762_bases
ATGAGCAACCGCGCGTGGATGCCGCTTCACATCGCCGACTACCTCGCTGACACCGGACACCTGACGGCGACGGAGCACGG
CGCCTATCTGTTGCTGATCATGCACTACTGGCAGAACGGTGCACTACCGGAGAACGAGCGGGTTATCGCCCGCATCGCCA
AGCTCTCGCCCGAGCAGTGGGAAGAGAGCCGCGACATGCTCGCGATGCTGTTTGGCCCTGGCTGGAAGCACAAGCGCATT
GATGCTGAACTCGAGAAGGCTGACGAGATCATCGAGAAGCGCCGCGCCGCCGCAGAAGCTCGGTATTCCAAGGGGAAAAA
CCAGACATCAGATGCAAATGCAATGCATGTGCAAAGCAAGTGCAGTGATACGGGCGAAAAACCTTTTACCGATAACCATT
CTTCCTCACTCCGTTCGGAAGACGCGCGCGCGCCGGTGATCAATCCTGATTTCGAACGATTTTGGGATGCCTACCCGAAC
AAGACCGGCAGGCCGTCGGCGGAGAAAGCTTTCTCCCAAGCAGTCAAGCGCGCCAGCCTCGACGAGATCCTGGCCGGGGT
TCGAACCTATGCGGCCAAGGCCGACGATCGCCAGTGGTGTTCGCCGGTGAGGTGGCTGTCGGACGATCGCTGGAAAGACC
AGCCCGCGAAGCCGCCCGATAAACCGGCGCGGACCGGCGGCCTTTCTCACCTGCAGAATTTCCAATCTCGCGAGGACTAC
CTCGCAGCTGAAAAAAAACGATCCGAAAGGAGTTTCCGATGA

Upstream 100 bases:

>100_bases
GCTTCCGCGTCGTCGACGTCAAGGGCGTCATCACCCGCGATTTTCGGCGCGTCCGCAAGATCATCAAGGCCGCCTACAAT
ATCGATGTCGAGGTGTGGAA

Downstream 100 bases:

>100_bases
CGAGTTTTATCTGGACAGAGGACAACATCTCCAAAGCGGCACAGCTTTGGGCCGACGGCATATCGGCGCGAGAAATCGGT
GAACGGTTTGGCGCGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSNRAWMPLHIADYLADTGHLTATEHGAYLLLIMHYWQNGALPENERVIARIAKLSPEQWEESRDMLAMLFGPGWKHKRI
DAELEKADEIIEKRRAAAEARYSKGKNQTSDANAMHVQSKCSDTGEKPFTDNHSSSLRSEDARAPVINPDFERFWDAYPN
KTGRPSAEKAFSQAVKRASLDEILAGVRTYAAKADDRQWCSPVRWLSDDRWKDQPAKPPDKPARTGGLSHLQNFQSREDY
LAAEKKRSERSFR

Sequences:

>Translated_253_residues
MSNRAWMPLHIADYLADTGHLTATEHGAYLLLIMHYWQNGALPENERVIARIAKLSPEQWEESRDMLAMLFGPGWKHKRI
DAELEKADEIIEKRRAAAEARYSKGKNQTSDANAMHVQSKCSDTGEKPFTDNHSSSLRSEDARAPVINPDFERFWDAYPN
KTGRPSAEKAFSQAVKRASLDEILAGVRTYAAKADDRQWCSPVRWLSDDRWKDQPAKPPDKPARTGGLSHLQNFQSREDY
LAAEKKRSERSFR
>Mature_252_residues
SNRAWMPLHIADYLADTGHLTATEHGAYLLLIMHYWQNGALPENERVIARIAKLSPEQWEESRDMLAMLFGPGWKHKRID
AELEKADEIIEKRRAAAEARYSKGKNQTSDANAMHVQSKCSDTGEKPFTDNHSSSLRSEDARAPVINPDFERFWDAYPNK
TGRPSAEKAFSQAVKRASLDEILAGVRTYAAKADDRQWCSPVRWLSDDRWKDQPAKPPDKPARTGGLSHLQNFQSREDYL
AAEKKRSERSFR

Specific function: Unknown

COG id: COG3756

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=104, Percent_Identity=45.1923076923077, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 28897; Mature: 28766

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRAWMPLHIADYLADTGHLTATEHGAYLLLIMHYWQNGALPENERVIARIAKLSPEQW
CCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHH
EESRDMLAMLFGPGWKHKRIDAELEKADEIIEKRRAAAEARYSKGKNQTSDANAMHVQSK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
CSDTGEKPFTDNHSSSLRSEDARAPVINPDFERFWDAYPNKTGRPSAEKAFSQAVKRASL
HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCH
DEILAGVRTYAAKADDRQWCSPVRWLSDDRWKDQPAKPPDKPARTGGLSHLQNFQSREDY
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
LAAEKKRSERSFR
HHHHHHHHHCCCC
>Mature Secondary Structure 
SNRAWMPLHIADYLADTGHLTATEHGAYLLLIMHYWQNGALPENERVIARIAKLSPEQW
CCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHH
EESRDMLAMLFGPGWKHKRIDAELEKADEIIEKRRAAAEARYSKGKNQTSDANAMHVQSK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
CSDTGEKPFTDNHSSSLRSEDARAPVINPDFERFWDAYPNKTGRPSAEKAFSQAVKRASL
HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCH
DEILAGVRTYAAKADDRQWCSPVRWLSDDRWKDQPAKPPDKPARTGGLSHLQNFQSREDY
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH
LAAEKKRSERSFR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]