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The map label for this gene is ugpB [H]

Identifier: 209549935

GI number: 209549935

Start: 2411512

End: 2412819

Strand: Reverse

Name: ugpB [H]

Synonym: Rleg2_2351

Alternate gene names: 209549935

Gene position: 2412819-2411512 (Counterclockwise)

Preceding gene: 209549938

Following gene: 209549934

Centisome position: 53.17

GC content: 61.31

Gene sequence:

>1308_bases
ATGAAGATTTCCATTCTGGCGGCTGCGGCCGCGCTGATGGCGGGCGCATGTTCCGCACAGGCGGCCAATATCGAATTCTG
GTACGGCAATACCGGTGTCGTCGAGACGGCGATCCAAGCCCAATGCAGTGCATTCAATGCCGCGCAGACCGAGCATCACA
TTACCTGCGTTGGCCAGGGCAGCTACGAGGTGTCGATGCAGAAGGCGATCGCAGCCTTTCGCGCCAAGAACCATCCCGTC
CTCATCCAGTTCTTCGACGCCGGCACGCTCGATCTGATGCTGTCGGACGCTGTTGTGCCAGTCCAGGAGGTGCTGCCCGA
CGTCAAGTGGGAAAGCTATATTGCCGGGGCGCGCGCCTATTACGAAACCTCCGGCGGCAAGCTTTTCGCCCAGCCTTACA
ATGCCTCGACGCTGCTCTTCTACACCAACAAGACCGAGCTTCAGAAAGCCGGCGTCACCGAGACGCCGACGACCTGGGAA
GAGATCATCGAAGCTGCCCGCAAGCTGAAGGCATCGGGTCATGCCTGCCCCTTCGTCACCGACGGCGATACATGGCGCGT
GCTCGAACAGTTCTCGGCCCGTCACGGCCTGCCGATCGCCTCCAGGCACAATGGCTATGACGGCCTCGACGCCGGATATG
TCTTCAACACCACGTTCGCCGCCAAGCATTTGCAGAACCTGGTCGACTGGCGCAAGGAAGGCCTCGTCAGGCTCGCAAGC
GATACCAAGGCCGGTAATTTCACCGCCGCCTTCAATGCCGGCGAATGCGCGATGATGGAGAATTCCTCGGGTTCTTATAC
CGCTTCCGCCAAGGCGTTCGAAGGCAAGTACGAGCTCACTGTCGGCATGGCGCCGATGTACAAGGGGTATGAGCGCCACA
ACACGCTCGTTGGCGGCGCCTCGATCTACATCATGAAAGGCCACGACAAGGCCGAAATCGAGGGCGCCAAGGCCTTCCTC
GATTTCGTGCGCCGACCCGAACAGCAGATGGCCTTCACGTCAGCCACCGGCTACGTGCCGGTCACCAGCGACGTGATGGA
CGCGATCGCCAAGAGCGGCGAGGCGAATACGCCGAAATACGCCACGGCCGCCGTCGGCATCGGTTCGATGAATGAGCCGC
GCACGCCGGATACCCGCGGCATCCGCCTCGGCTTCTACGTGCAGTTTCGCCAGGTCTTCATGGAAGAAACGCAGAAGGCT
TTTGCCGGCGGGCAGACGATGCAGGCAGCGCTCGATAACGCCAAGAAGCGCGGCGACGAGCTGCTGCGCCGCTTCGAGCA
GACCTACAAGGGCGTAAAGCTGCACTGA

Upstream 100 bases:

>100_bases
GCGCCTCGCGTGCGTCACCAAATTGTTACACACTGTGTGTAATAAATCGCCGTCAACCGAGCCAGGCGCGAAGCCGGCCG
ATCAAACAGGCGAGGGCAAG

Downstream 100 bases:

>100_bases
TCCGAACCTCCCCCAATGCAGGGTTTTCCATGATGTCGGAATCTTCGCTCTTCAGCCATCGCTGGCTGCCGCTTCTGCTG
GTAGCGCCGCTCATGCTGCT

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKISILAAAAALMAGACSAQAANIEFWYGNTGVVETAIQAQCSAFNAAQTEHHITCVGQGSYEVSMQKAIAAFRAKNHPV
LIQFFDAGTLDLMLSDAVVPVQEVLPDVKWESYIAGARAYYETSGGKLFAQPYNASTLLFYTNKTELQKAGVTETPTTWE
EIIEAARKLKASGHACPFVTDGDTWRVLEQFSARHGLPIASRHNGYDGLDAGYVFNTTFAAKHLQNLVDWRKEGLVRLAS
DTKAGNFTAAFNAGECAMMENSSGSYTASAKAFEGKYELTVGMAPMYKGYERHNTLVGGASIYIMKGHDKAEIEGAKAFL
DFVRRPEQQMAFTSATGYVPVTSDVMDAIAKSGEANTPKYATAAVGIGSMNEPRTPDTRGIRLGFYVQFRQVFMEETQKA
FAGGQTMQAALDNAKKRGDELLRRFEQTYKGVKLH

Sequences:

>Translated_435_residues
MKISILAAAAALMAGACSAQAANIEFWYGNTGVVETAIQAQCSAFNAAQTEHHITCVGQGSYEVSMQKAIAAFRAKNHPV
LIQFFDAGTLDLMLSDAVVPVQEVLPDVKWESYIAGARAYYETSGGKLFAQPYNASTLLFYTNKTELQKAGVTETPTTWE
EIIEAARKLKASGHACPFVTDGDTWRVLEQFSARHGLPIASRHNGYDGLDAGYVFNTTFAAKHLQNLVDWRKEGLVRLAS
DTKAGNFTAAFNAGECAMMENSSGSYTASAKAFEGKYELTVGMAPMYKGYERHNTLVGGASIYIMKGHDKAEIEGAKAFL
DFVRRPEQQMAFTSATGYVPVTSDVMDAIAKSGEANTPKYATAAVGIGSMNEPRTPDTRGIRLGFYVQFRQVFMEETQKA
FAGGQTMQAALDNAKKRGDELLRRFEQTYKGVKLH
>Mature_435_residues
MKISILAAAAALMAGACSAQAANIEFWYGNTGVVETAIQAQCSAFNAAQTEHHITCVGQGSYEVSMQKAIAAFRAKNHPV
LIQFFDAGTLDLMLSDAVVPVQEVLPDVKWESYIAGARAYYETSGGKLFAQPYNASTLLFYTNKTELQKAGVTETPTTWE
EIIEAARKLKASGHACPFVTDGDTWRVLEQFSARHGLPIASRHNGYDGLDAGYVFNTTFAAKHLQNLVDWRKEGLVRLAS
DTKAGNFTAAFNAGECAMMENSSGSYTASAKAFEGKYELTVGMAPMYKGYERHNTLVGGASIYIMKGHDKAEIEGAKAFL
DFVRRPEQQMAFTSATGYVPVTSDVMDAIAKSGEANTPKYATAAVGIGSMNEPRTPDTRGIRLGFYVQFRQVFMEETQKA
FAGGQTMQAALDNAKKRGDELLRRFEQTYKGVKLH

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=426, Percent_Identity=36.150234741784, Blast_Score=248, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47383; Mature: 47383

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISILAAAAALMAGACSAQAANIEFWYGNTGVVETAIQAQCSAFNAAQTEHHITCVGQG
CEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC
SYEVSMQKAIAAFRAKNHPVLIQFFDAGTLDLMLSDAVVPVQEVLPDVKWESYIAGARAY
CCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCHHHHHHCCHHE
YETSGGKLFAQPYNASTLLFYTNKTELQKAGVTETPTTWEEIIEAARKLKASGHACPFVT
EECCCCEEEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
DGDTWRVLEQFSARHGLPIASRHNGYDGLDAGYVFNTTFAAKHLQNLVDWRKEGLVRLAS
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEC
DTKAGNFTAAFNAGECAMMENSSGSYTASAKAFEGKYELTVGMAPMYKGYERHNTLVGGA
CCCCCCEEEEECCCCEEEEECCCCCEEEECCEECCEEEEEEECCHHHCCHHHCCEEECCE
SIYIMKGHDKAEIEGAKAFLDFVRRPEQQMAFTSATGYVPVTSDVMDAIAKSGEANTPKY
EEEEEECCCCHHHHHHHHHHHHHHCCHHHHEECCCCCCCEECHHHHHHHHHCCCCCCCCE
ATAAVGIGSMNEPRTPDTRGIRLGFYVQFRQVFMEETQKAFAGGQTMQAALDNAKKRGDE
EEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLRRFEQTYKGVKLH
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MKISILAAAAALMAGACSAQAANIEFWYGNTGVVETAIQAQCSAFNAAQTEHHITCVGQG
CEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC
SYEVSMQKAIAAFRAKNHPVLIQFFDAGTLDLMLSDAVVPVQEVLPDVKWESYIAGARAY
CCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCHHHHHHCCHHE
YETSGGKLFAQPYNASTLLFYTNKTELQKAGVTETPTTWEEIIEAARKLKASGHACPFVT
EECCCCEEEECCCCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
DGDTWRVLEQFSARHGLPIASRHNGYDGLDAGYVFNTTFAAKHLQNLVDWRKEGLVRLAS
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEC
DTKAGNFTAAFNAGECAMMENSSGSYTASAKAFEGKYELTVGMAPMYKGYERHNTLVGGA
CCCCCCEEEEECCCCEEEEECCCCCEEEECCEECCEEEEEEECCHHHCCHHHCCEEECCE
SIYIMKGHDKAEIEGAKAFLDFVRRPEQQMAFTSATGYVPVTSDVMDAIAKSGEANTPKY
EEEEEECCCCHHHHHHHHHHHHHHCCHHHHEECCCCCCCEECHHHHHHHHHCCCCCCCCE
ATAAVGIGSMNEPRTPDTRGIRLGFYVQFRQVFMEETQKAFAGGQTMQAALDNAKKRGDE
EEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLRRFEQTYKGVKLH
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA