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The map label for this gene is ugpA [H]

Identifier: 209549934

GI number: 209549934

Start: 2410592

End: 2411482

Strand: Reverse

Name: ugpA [H]

Synonym: Rleg2_2350

Alternate gene names: 209549934

Gene position: 2411482-2410592 (Counterclockwise)

Preceding gene: 209549935

Following gene: 209549933

Centisome position: 53.14

GC content: 63.3

Gene sequence:

>891_bases
ATGATGTCGGAATCTTCGCTCTTCAGCCATCGCTGGCTGCCGCTTCTGCTGGTAGCGCCGCTCATGCTGCTGATCGTGCT
GTTCTTCTACGCGCCGATTTTCCAGGCCTTCTACTGGTCCTTCTTCCTCGAGCGCCCCTTCGGGGGCGGCTCGATGTTCG
TCGGCTGGGACAATTTCATCCGGGTCATTTCCGATCCCGAATTCTGGGAGGCCGGCTGGCGCACCATCATTTTCATGGTT
ACCGGCTCCACGCTTGCGGTGGCGATCCCGCTGATCCTGGCGGTTGCAGCCGACCGGAAAATCGCAATGTCGCTGCCGGC
GCGCAACGTGCTGGTCTGGCCGAAGGGGGTTGCCGGCGCCTCGATCGGCGTCGTCTTCGCCTTCCTCTTCAATCCTTTCG
CCGGCGTGCTGGCGCCGCTCAATTCCATCTTTCCCGGCATCTGGGCGCCCGGCATCGACGGCACGGACGCTTTCATCACG
CTGATCGCGGCGCATGTCTGGGGCGGAATCCCGTTCAATTTCGTCATCCTGCTCGCCGGCCTGCAATCGATCCCGCGCAG
CATGCACCAGGCGGCGGCGATGGACGGGGCAGGGCCGTGGCGACGGATCCTCGACGTGCAGCTGCCGCTCATCATGCCGC
AGCTCTTCCTGACACTGGTGCTGGAATTCACCGAAAGCGTCACTTCCGCCTTCGCGCTGATCGACACGATCACCAAAGGC
GGGCCGGGCGGCTCGACGACGCTGCTCGTCTACAAGATCTATACCGATGGCTTTTCCGGCTACGACCTCTCCGGCGCCTC
CACCCAGACGGCGATCCTGATGGTCTTCGTCGTCCTCCTCACCGCTGCCCAGTTTGTCTTCCTCGGCCGGCGCGTCAGCT
ACGACAGGTGA

Upstream 100 bases:

>100_bases
ACGCCAAGAAGCGCGGCGACGAGCTGCTGCGCCGCTTCGAGCAGACCTACAAGGGCGTAAAGCTGCACTGATCCGAACCT
CCCCCAATGCAGGGTTTTCC

Downstream 100 bases:

>100_bases
ACCATGATCGAAAACGCCCGTTCGCTCAACATCGCCGCCAGCTTCATCCTGATCGCCGGCATCGCCTATATTCTCGGGCC
GCTCTATCTGACGCTGTCGA

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MMSESSLFSHRWLPLLLVAPLMLLIVLFFYAPIFQAFYWSFFLERPFGGGSMFVGWDNFIRVISDPEFWEAGWRTIIFMV
TGSTLAVAIPLILAVAADRKIAMSLPARNVLVWPKGVAGASIGVVFAFLFNPFAGVLAPLNSIFPGIWAPGIDGTDAFIT
LIAAHVWGGIPFNFVILLAGLQSIPRSMHQAAAMDGAGPWRRILDVQLPLIMPQLFLTLVLEFTESVTSAFALIDTITKG
GPGGSTTLLVYKIYTDGFSGYDLSGASTQTAILMVFVVLLTAAQFVFLGRRVSYDR

Sequences:

>Translated_296_residues
MMSESSLFSHRWLPLLLVAPLMLLIVLFFYAPIFQAFYWSFFLERPFGGGSMFVGWDNFIRVISDPEFWEAGWRTIIFMV
TGSTLAVAIPLILAVAADRKIAMSLPARNVLVWPKGVAGASIGVVFAFLFNPFAGVLAPLNSIFPGIWAPGIDGTDAFIT
LIAAHVWGGIPFNFVILLAGLQSIPRSMHQAAAMDGAGPWRRILDVQLPLIMPQLFLTLVLEFTESVTSAFALIDTITKG
GPGGSTTLLVYKIYTDGFSGYDLSGASTQTAILMVFVVLLTAAQFVFLGRRVSYDR
>Mature_296_residues
MMSESSLFSHRWLPLLLVAPLMLLIVLFFYAPIFQAFYWSFFLERPFGGGSMFVGWDNFIRVISDPEFWEAGWRTIIFMV
TGSTLAVAIPLILAVAADRKIAMSLPARNVLVWPKGVAGASIGVVFAFLFNPFAGVLAPLNSIFPGIWAPGIDGTDAFIT
LIAAHVWGGIPFNFVILLAGLQSIPRSMHQAAAMDGAGPWRRILDVQLPLIMPQLFLTLVLEFTESVTSAFALIDTITKG
GPGGSTTLLVYKIYTDGFSGYDLSGASTQTAILMVFVVLLTAAQFVFLGRRVSYDR

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=295, Percent_Identity=37.6271186440678, Blast_Score=190, Evalue=9e-50,
Organism=Escherichia coli, GI1787570, Length=264, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=28.4584980237154, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32342; Mature: 32342

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSESSLFSHRWLPLLLVAPLMLLIVLFFYAPIFQAFYWSFFLERPFGGGSMFVGWDNFI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH
RVISDPEFWEAGWRTIIFMVTGSTLAVAIPLILAVAADRKIAMSLPARNVLVWPKGVAGA
HHCCCCHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCH
SIGVVFAFLFNPFAGVLAPLNSIFPGIWAPGIDGTDAFITLIAAHVWGGIPFNFVILLAG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LQSIPRSMHQAAAMDGAGPWRRILDVQLPLIMPQLFLTLVLEFTESVTSAFALIDTITKG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPGGSTTLLVYKIYTDGFSGYDLSGASTQTAILMVFVVLLTAAQFVFLGRRVSYDR
CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSESSLFSHRWLPLLLVAPLMLLIVLFFYAPIFQAFYWSFFLERPFGGGSMFVGWDNFI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH
RVISDPEFWEAGWRTIIFMVTGSTLAVAIPLILAVAADRKIAMSLPARNVLVWPKGVAGA
HHCCCCHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCH
SIGVVFAFLFNPFAGVLAPLNSIFPGIWAPGIDGTDAFITLIAAHVWGGIPFNFVILLAG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
LQSIPRSMHQAAAMDGAGPWRRILDVQLPLIMPQLFLTLVLEFTESVTSAFALIDTITKG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPGGSTTLLVYKIYTDGFSGYDLSGASTQTAILMVFVVLLTAAQFVFLGRRVSYDR
CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA