| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549857
Identifier: 209549857
GI number: 209549857
Start: 2327286
End: 2328209
Strand: Reverse
Name: 209549857
Synonym: Rleg2_2270
Alternate gene names: NA
Gene position: 2328209-2327286 (Counterclockwise)
Preceding gene: 209549859
Following gene: 209549856
Centisome position: 51.31
GC content: 64.61
Gene sequence:
>924_bases ATGATCCCCGATTTCCTCGTCACCCATTCCGGTGGCTTCCATGCCGATGAATTGCTGTCGAGCGTCATTCTGACCCGGCT TTTCCCGCAGGCGCGTATCGTCCGCAGCCGGGCGCCGGAATGGATCACGCCTGGCGAAGGCCGCATCATCTATGATGTCG GCGGTGCCTATGATCCTGCTGCGGGGATATTCGATCACCACCAGCGCGGCGCGCCGACGCGCGAAGATGGCCAGCCCTAC AGCTCGTTCGGCTTGATCTGGAAGCATTATGGCCGTGATTATCTCGCAGCCTCCGGCCTTCCCGAAGCGCATGTCGAGGC GGTGCACGGCTCTTTCGATGCCGGCTTCGTGCTGCCCATCGATCTGACCGACAATGGCGCGCTCAGCCCCTCGGGGCCGT TGGCGGGTTTGACCTTGCCGGCGCTGCTGGAGACGCTGAAACCGGTTTTCGACGAAGCGGAACCCGAGGCCGACGATCGC GCCTTCCACGCAGCGCTTGCCATCGCCCGCAGTTTCGTCGAGGCGAGGATAGCCCAGAGTGCCGCAAAGTTGCGGGCCGA GGCGATGGTGCATCTGGCAATCCAGGCTGCGGGGCAGGGGCGCGTTCTGGAGTTGCCGAGGGGAATGCCGTTCCGTCCCG CCATCGTCAAGGCAGGGGCCGATCACCTGCTGTTCGTCGTCCATCCGCGCGAAAAGGATTGGTGCGTGACCGGCATCCGA CGGGCCGAAGAGGGCTTCGAGCTCAGGGCCGATCTGCCGGCAGCCTGGGCCGGTCTCGCCAATGGAGAGCTGGAGGCTGT TTGCGGCATAAAGGGCGCGAGTTTCTGCCACAACGGCCGCTTCATTGCCGCCGCCAGGACCCGCGAGGCAGCACTTGCCA TGGCGGATTTGGCGGTGAAGGAGGCGCTTTCGATCGGGGTGTAG
Upstream 100 bases:
>100_bases GTGAAATGCGCCAAGCATGGGTTGAGATCGTCGCCGGCAACGGCTATCTGGTTCCGACCCGCAAGCGGACCCTCCGCGAA CGACAAGGCGCAAAGCTCCC
Downstream 100 bases:
>100_bases CGGCCGTTATCCGCGTCGGGTTCACCTGATCTCATATGCGTTCAGGTGACCCCAACTGTGAGGCGATTGACTTGCATCCG CGAAGGATTAAGCTTCGAGC
Product: metal-dependent protein hydrolase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Protein; Hydrolase Protein; MYG1 Protein
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MIPDFLVTHSGGFHADELLSSVILTRLFPQARIVRSRAPEWITPGEGRIIYDVGGAYDPAAGIFDHHQRGAPTREDGQPY SSFGLIWKHYGRDYLAASGLPEAHVEAVHGSFDAGFVLPIDLTDNGALSPSGPLAGLTLPALLETLKPVFDEAEPEADDR AFHAALAIARSFVEARIAQSAAKLRAEAMVHLAIQAAGQGRVLELPRGMPFRPAIVKAGADHLLFVVHPREKDWCVTGIR RAEEGFELRADLPAAWAGLANGELEAVCGIKGASFCHNGRFIAAARTREAALAMADLAVKEALSIGV
Sequences:
>Translated_307_residues MIPDFLVTHSGGFHADELLSSVILTRLFPQARIVRSRAPEWITPGEGRIIYDVGGAYDPAAGIFDHHQRGAPTREDGQPY SSFGLIWKHYGRDYLAASGLPEAHVEAVHGSFDAGFVLPIDLTDNGALSPSGPLAGLTLPALLETLKPVFDEAEPEADDR AFHAALAIARSFVEARIAQSAAKLRAEAMVHLAIQAAGQGRVLELPRGMPFRPAIVKAGADHLLFVVHPREKDWCVTGIR RAEEGFELRADLPAAWAGLANGELEAVCGIKGASFCHNGRFIAAARTREAALAMADLAVKEALSIGV >Mature_307_residues MIPDFLVTHSGGFHADELLSSVILTRLFPQARIVRSRAPEWITPGEGRIIYDVGGAYDPAAGIFDHHQRGAPTREDGQPY SSFGLIWKHYGRDYLAASGLPEAHVEAVHGSFDAGFVLPIDLTDNGALSPSGPLAGLTLPALLETLKPVFDEAEPEADDR AFHAALAIARSFVEARIAQSAAKLRAEAMVHLAIQAAGQGRVLELPRGMPFRPAIVKAGADHLLFVVHPREKDWCVTGIR RAEEGFELRADLPAAWAGLANGELEAVCGIKGASFCHNGRFIAAARTREAALAMADLAVKEALSIGV
Specific function: Unknown
COG id: COG4286
COG function: function code S; Uncharacterized conserved protein related to MYG1 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI145275185, Length=323, Percent_Identity=30.030959752322, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25150283, Length=330, Percent_Identity=29.0909090909091, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321004, Length=326, Percent_Identity=29.7546012269939, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI45551849, Length=326, Percent_Identity=28.5276073619632, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24645224, Length=326, Percent_Identity=28.5276073619632, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24645226, Length=326, Percent_Identity=28.5276073619632, Blast_Score=105, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32849; Mature: 32849
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDFLVTHSGGFHADELLSSVILTRLFPQARIVRSRAPEWITPGEGRIIYDVGGAYDPA CCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC AGIFDHHQRGAPTREDGQPYSSFGLIWKHYGRDYLAASGLPEAHVEAVHGSFDAGFVLPI CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCEEEEE DLTDNGALSPSGPLAGLTLPALLETLKPVFDEAEPEADDRAFHAALAIARSFVEARIAQS EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAKLRAEAMVHLAIQAAGQGRVLELPRGMPFRPAIVKAGADHLLFVVHPREKDWCVTGIR HHHHHHHHHHHHEEEECCCCCEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHH RAEEGFELRADLPAAWAGLANGELEAVCGIKGASFCHNGRFIAAARTREAALAMADLAVK HHHCCCEEECCCCHHHHCCCCCCEEEEECCCCCCEECCCEEEEEECHHHHHHHHHHHHHH EALSIGV HHHHCCC >Mature Secondary Structure MIPDFLVTHSGGFHADELLSSVILTRLFPQARIVRSRAPEWITPGEGRIIYDVGGAYDPA CCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC AGIFDHHQRGAPTREDGQPYSSFGLIWKHYGRDYLAASGLPEAHVEAVHGSFDAGFVLPI CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCCCEEEEE DLTDNGALSPSGPLAGLTLPALLETLKPVFDEAEPEADDRAFHAALAIARSFVEARIAQS EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAKLRAEAMVHLAIQAAGQGRVLELPRGMPFRPAIVKAGADHLLFVVHPREKDWCVTGIR HHHHHHHHHHHHEEEECCCCCEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHH RAEEGFELRADLPAAWAGLANGELEAVCGIKGASFCHNGRFIAAARTREAALAMADLAVK HHHCCCEEECCCCHHHHCCCCCCEEEEECCCCCCEECCCEEEEEECHHHHHHHHHHHHHH EALSIGV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA