Click here to switch to the map view.

The map label for this gene is yahN [H]

Identifier: 209549827

GI number: 209549827

Start: 2293048

End: 2293662

Strand: Direct

Name: yahN [H]

Synonym: Rleg2_2239

Alternate gene names: 209549827

Gene position: 2293048-2293662 (Clockwise)

Preceding gene: 209549824

Following gene: 209549829

Centisome position: 50.53

GC content: 59.67

Gene sequence:

>615_bases
ATGGACTATATCAATTCGCTCGCATTGCTCGTCAGCGTCTACATCGCCTCCCTCGTCAGCCCCGGACCGAATTTCATCAT
CGTCACCAACACAAGCATGACGGTATCGCGCGCTGCCGGGCTCTTCGCAGGTCTCGGACTTGCGATCGCATCCCTGACCT
GGGCCATCATGGCGATGGCGGGGCTCGGTTTTCTGCTGACCCATTTCGAATGGCTGCATGTGATGTTGCAGGTGGCCGGC
GCATTGTATCTGATCTGGCTGGGGTTGAAGATGATCCGCAACGCGGCGAAGCCCTTGAAGCCGACGGGACCGAGCGAAGT
CTCCTGGCGCTCGGCCATGCGCCGCGCTTACGTCGTCAGCATGACCAATCCGAAATCGGTGGCTTTCTTCGGCAGTATCT
TTGCGCTTGTCATCCCGGCACATGCGCCCGTCTGGCTCTATTGCCTCATCGCCCTGACCTGCTTCCTTCTTTCGGCTCTC
TGGTATTGCGGCCTGGCCTTTTTCTTTTCGAATCCGCGCGTTTCCGCCGGTTTCCTGCGCTTCAAGGCCAGCATCGAGCG
CGTGATGGGCGCCGCCCTGATCTTGATCGGCGGCCGCCTGCTCTTGGTTCGCTAA

Upstream 100 bases:

>100_bases
GACGGCCTGTCCGTCAGCCCTTAAGCAGCCCTTGAGTGAGAAGCCCTTTCAAAAGCCACCGGCCTCGCATAGGCTCGGGC
CAGCAACGTAGGAAAGCCTG

Downstream 100 bases:

>100_bases
CGGCATCCGAAAGCATGTCGCGCAAAACCGTGCAGCCGCTTTGCCGCAACGACATCGCTGGTCAGGTCGCAGGCGAAGCC
GGCAATGCTTCATCGATGTC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MDYINSLALLVSVYIASLVSPGPNFIIVTNTSMTVSRAAGLFAGLGLAIASLTWAIMAMAGLGFLLTHFEWLHVMLQVAG
ALYLIWLGLKMIRNAAKPLKPTGPSEVSWRSAMRRAYVVSMTNPKSVAFFGSIFALVIPAHAPVWLYCLIALTCFLLSAL
WYCGLAFFFSNPRVSAGFLRFKASIERVMGAALILIGGRLLLVR

Sequences:

>Translated_204_residues
MDYINSLALLVSVYIASLVSPGPNFIIVTNTSMTVSRAAGLFAGLGLAIASLTWAIMAMAGLGFLLTHFEWLHVMLQVAG
ALYLIWLGLKMIRNAAKPLKPTGPSEVSWRSAMRRAYVVSMTNPKSVAFFGSIFALVIPAHAPVWLYCLIALTCFLLSAL
WYCGLAFFFSNPRVSAGFLRFKASIERVMGAALILIGGRLLLVR
>Mature_204_residues
MDYINSLALLVSVYIASLVSPGPNFIIVTNTSMTVSRAAGLFAGLGLAIASLTWAIMAMAGLGFLLTHFEWLHVMLQVAG
ALYLIWLGLKMIRNAAKPLKPTGPSEVSWRSAMRRAYVVSMTNPKSVAFFGSIFALVIPAHAPVWLYCLIALTCFLLSAL
WYCGLAFFFSNPRVSAGFLRFKASIERVMGAALILIGGRLLLVR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=203, Percent_Identity=29.064039408867, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI48994978, Length=196, Percent_Identity=29.0816326530612, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1788099, Length=179, Percent_Identity=27.9329608938547, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22177; Mature: 22177

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYINSLALLVSVYIASLVSPGPNFIIVTNTSMTVSRAAGLFAGLGLAIASLTWAIMAMA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGFLLTHFEWLHVMLQVAGALYLIWLGLKMIRNAAKPLKPTGPSEVSWRSAMRRAYVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEE
MTNPKSVAFFGSIFALVIPAHAPVWLYCLIALTCFLLSALWYCGLAFFFSNPRVSAGFLR
ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FKASIERVMGAALILIGGRLLLVR
HHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MDYINSLALLVSVYIASLVSPGPNFIIVTNTSMTVSRAAGLFAGLGLAIASLTWAIMAMA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGFLLTHFEWLHVMLQVAGALYLIWLGLKMIRNAAKPLKPTGPSEVSWRSAMRRAYVVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEE
MTNPKSVAFFGSIFALVIPAHAPVWLYCLIALTCFLLSALWYCGLAFFFSNPRVSAGFLR
ECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FKASIERVMGAALILIGGRLLLVR
HHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]