| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yigE [H]
Identifier: 209549824
GI number: 209549824
Start: 2290604
End: 2291380
Strand: Direct
Name: yigE [H]
Synonym: Rleg2_2236
Alternate gene names: 209549824
Gene position: 2290604-2291380 (Clockwise)
Preceding gene: 209549823
Following gene: 209549827
Centisome position: 50.48
GC content: 60.88
Gene sequence:
>777_bases ATGACCTATTTCAAACAAGCCGCGTTCGCTGCCACCATGATGCTGGCAGCAACGATGACACCCCTGCATCAGGCCCATGC CGAGCAATGCGACCAGGAGACTTTCGAAGAGGCGAAATACGTCGTCTGCACCCTGCAAACGGGGAAATCCGACCTGCGCC TGTTCTGGAAGGGCGCCGATGGCGAGCCTTACCGCACTTTTTCAAGCCTTGCCGAAGCCGTTGGCGCCGAGGGCAAGACG CTGGCGCTGGCCGTCAATGCCGGCATGTACCGGGCGGATTTTTCGCCGATGGGGCTGTATGTCGAGAACGCCAGGGAATT GAAACCCGCCAATACCGCAAGGGCCGAAAGCTCCGCCGGCCAGGTGCCGAATTTCTACAAGAAGCCGAACGGCGTATTCT TTCTTGGTGAAACCGGCGCCGGCATACTGCCAACCGATGAATTTCTAAAGCGTGCGCAGAAGGCGCGATTCGCCACGCAG TCCGGTCCGATGCTTGTCATCGCCGACAAGCTGAACCCAATCTTCATCCCCGGCTCGACGGATCGAACCCGCAGAAGTGG TATCGGTGTCTGCGCGGCCGGCACGGTTCGCTTGGCGATCAGCGAAGACGGAGTGAATTTCCACGATTTCGCGCGGCTCT TCCGCGACCAGCTGCAATGCCCCGACGCCTTGTTCCTCGACGGCGGAAACGGTGTTGGGCTGTACCATCCGGCGATGGGC CGCAACGACCGCTCCTGGCACGGCGGCTACGGCCCGATGCTCGGGCTTGTCGAATAG
Upstream 100 bases:
>100_bases CTGAATTATCGCCTGTTCCTCGCCAATATCCTGACGGGCGTGCTGCTCGCCGGCACGGCTATGTCGGGCACATGGTAGAC AGCTCGAGGACGTGATACCG
Downstream 100 bases:
>100_bases TGGCCGAGGAAATCCGCCTGGATCGAAGGGGCATCGAGCCGCGTACCGCATCTTGATTCACCTCAAATCGGTCGGGCACC GAAAAACAGTGCCGTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTYFKQAAFAATMMLAATMTPLHQAHAEQCDQETFEEAKYVVCTLQTGKSDLRLFWKGADGEPYRTFSSLAEAVGAEGKT LALAVNAGMYRADFSPMGLYVENARELKPANTARAESSAGQVPNFYKKPNGVFFLGETGAGILPTDEFLKRAQKARFATQ SGPMLVIADKLNPIFIPGSTDRTRRSGIGVCAAGTVRLAISEDGVNFHDFARLFRDQLQCPDALFLDGGNGVGLYHPAMG RNDRSWHGGYGPMLGLVE
Sequences:
>Translated_258_residues MTYFKQAAFAATMMLAATMTPLHQAHAEQCDQETFEEAKYVVCTLQTGKSDLRLFWKGADGEPYRTFSSLAEAVGAEGKT LALAVNAGMYRADFSPMGLYVENARELKPANTARAESSAGQVPNFYKKPNGVFFLGETGAGILPTDEFLKRAQKARFATQ SGPMLVIADKLNPIFIPGSTDRTRRSGIGVCAAGTVRLAISEDGVNFHDFARLFRDQLQCPDALFLDGGNGVGLYHPAMG RNDRSWHGGYGPMLGLVE >Mature_257_residues TYFKQAAFAATMMLAATMTPLHQAHAEQCDQETFEEAKYVVCTLQTGKSDLRLFWKGADGEPYRTFSSLAEAVGAEGKTL ALAVNAGMYRADFSPMGLYVENARELKPANTARAESSAGQVPNFYKKPNGVFFLGETGAGILPTDEFLKRAQKARFATQS GPMLVIADKLNPIFIPGSTDRTRRSGIGVCAAGTVRLAISEDGVNFHDFARLFRDQLQCPDALFLDGGNGVGLYHPAMGR NDRSWHGGYGPMLGLVE
Specific function: Unknown
COG id: COG3698
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994975, Length=218, Percent_Identity=30.7339449541284, Blast_Score=119, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018711 [H]
Pfam domain/function: PF09992 DUF2233 [H]
EC number: NA
Molecular weight: Translated: 27989; Mature: 27858
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFKQAAFAATMMLAATMTPLHQAHAEQCDQETFEEAKYVVCTLQTGKSDLRLFWKGAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCC GEPYRTFSSLAEAVGAEGKTLALAVNAGMYRADFSPMGLYVENARELKPANTARAESSAG CCHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCEEECCHHHCCCCCCHHCCCCCC QVPNFYKKPNGVFFLGETGAGILPTDEFLKRAQKARFATQSGPMLVIADKLNPIFIPGST CCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCC DRTRRSGIGVCAAGTVRLAISEDGVNFHDFARLFRDQLQCPDALFLDGGNGVGLYHPAMG CCHHHCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCC RNDRSWHGGYGPMLGLVE CCCCCCCCCCCCCCCCCC >Mature Secondary Structure TYFKQAAFAATMMLAATMTPLHQAHAEQCDQETFEEAKYVVCTLQTGKSDLRLFWKGAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCC GEPYRTFSSLAEAVGAEGKTLALAVNAGMYRADFSPMGLYVENARELKPANTARAESSAG CCHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCEEECCHHHCCCCCCHHCCCCCC QVPNFYKKPNGVFFLGETGAGILPTDEFLKRAQKARFATQSGPMLVIADKLNPIFIPGST CCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCC DRTRRSGIGVCAAGTVRLAISEDGVNFHDFARLFRDQLQCPDALFLDGGNGVGLYHPAMG CCHHHCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCC RNDRSWHGGYGPMLGLVE CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]