| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is natA [H]
Identifier: 209549809
GI number: 209549809
Start: 2277623
End: 2278624
Strand: Direct
Name: natA [H]
Synonym: Rleg2_2220
Alternate gene names: 209549809
Gene position: 2277623-2278624 (Clockwise)
Preceding gene: 209549807
Following gene: 209549810
Centisome position: 50.19
GC content: 62.77
Gene sequence:
>1002_bases ATGACGGCTTTGATCGAGGCACGGGGCGTCAGCAAACGCTTCCGGCAGCACAAGAGATTTCCCGGTTTTCTGGGCGCCCT GAAGACACTGGTGACGAGCGAATACACCGAAGTTCTGGCCGTTTCCGACATCGATTTCGACGTCGCGGCCGGCGAAGCTG TGGGGTATCTCGGCCCCAACGGCGCCGGCAAATCAACGATGATCAAGATGATGACCGGCATCCTGGTCCCGAGCGCCGGC ACGCTTTCGGTGCTCGGCCGCACGCCGCATCTGAGCCGTATGGACAATGCACGCGAGATCGGCGTCGTCTTCGGCCAGCG CAGCCAGCTGTGGTGGGACCTGCCGCTGGTCGACAGTTTTACCTTGCACCAGCGCATCTACGACATCCCCTTCGCCCGCT ATGCGGATAATCTCCGCCGCTTCAGCGAACTGCTCGACCTCACGCCCTTTCTCGACCGCGCAGTGCGCCAGCTCAGCCTC GGCCAGCGCATGCGCGCCGAGATCGTCATGTCGCTGCTGCACGATCCGAAGATCCTCTTTCTGGACGAACCGACCATCGG GCTCGACGTGGTCGCCAAGGATGCGGTGCGGCGATTCCTTGCCGAGATCAACCGCGAGCGCGGCGTCACCATCATCCTCA CCACCCACGACCTGCAGGACATCGAGACCATCTGCCCGCGGCTGATCATGGTCGATCACTCGAGGCTGATCTTCGACGGC GAATTGAGGAGCCTGCGCGCGGCCTTGGGCTCGGCCCGGCGGCTGACACTTGAATTCGCGAGCGACCCCGGGCCGCTGCC GCTCAAGACGGCTACGCTCGTCAGCGACGAGGGTCTGCGCAAGAATTATCTGATCCAACGCGAAGACATATCGCTGGTCA AAATCCTGTCGGAGGTGGGAAGCGAACGCGGTCTCAAGGATGTGGCCCTGCACGAACCCGACATCGAAGAGGTCATCCGC ACGTTCTACCAGGGCCGCAACGCCAGGGCGCGAGCATCATGA
Upstream 100 bases:
>100_bases GATTGAGGGACAGGCAAAAGCGACTTTTGCTTGCACTAGCCGAGCCCGGCGTTAGCTTGAGTTCCAATCCTGACAGCTGC CGAATCGGCGGGAAATAAAG
Downstream 100 bases:
>100_bases GCGCTTATTCCGCCTTCGCGCGCAGCGCTTTCCATGCCCAGCTCGCCTACCGCAGCGAGGTCTGGGCGAACATCTTCGGC AAGCTCGTGCAAGTCTTCGC
Product: ABC transporter
Products: NA
Alternate protein names: Na(+) ABC transporter [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTALIEARGVSKRFRQHKRFPGFLGALKTLVTSEYTEVLAVSDIDFDVAAGEAVGYLGPNGAGKSTMIKMMTGILVPSAG TLSVLGRTPHLSRMDNAREIGVVFGQRSQLWWDLPLVDSFTLHQRIYDIPFARYADNLRRFSELLDLTPFLDRAVRQLSL GQRMRAEIVMSLLHDPKILFLDEPTIGLDVVAKDAVRRFLAEINRERGVTIILTTHDLQDIETICPRLIMVDHSRLIFDG ELRSLRAALGSARRLTLEFASDPGPLPLKTATLVSDEGLRKNYLIQREDISLVKILSEVGSERGLKDVALHEPDIEEVIR TFYQGRNARARAS
Sequences:
>Translated_333_residues MTALIEARGVSKRFRQHKRFPGFLGALKTLVTSEYTEVLAVSDIDFDVAAGEAVGYLGPNGAGKSTMIKMMTGILVPSAG TLSVLGRTPHLSRMDNAREIGVVFGQRSQLWWDLPLVDSFTLHQRIYDIPFARYADNLRRFSELLDLTPFLDRAVRQLSL GQRMRAEIVMSLLHDPKILFLDEPTIGLDVVAKDAVRRFLAEINRERGVTIILTTHDLQDIETICPRLIMVDHSRLIFDG ELRSLRAALGSARRLTLEFASDPGPLPLKTATLVSDEGLRKNYLIQREDISLVKILSEVGSERGLKDVALHEPDIEEVIR TFYQGRNARARAS >Mature_332_residues TALIEARGVSKRFRQHKRFPGFLGALKTLVTSEYTEVLAVSDIDFDVAAGEAVGYLGPNGAGKSTMIKMMTGILVPSAGT LSVLGRTPHLSRMDNAREIGVVFGQRSQLWWDLPLVDSFTLHQRIYDIPFARYADNLRRFSELLDLTPFLDRAVRQLSLG QRMRAEIVMSLLHDPKILFLDEPTIGLDVVAKDAVRRFLAEINRERGVTIILTTHDLQDIETICPRLIMVDHSRLIFDGE LRSLRAALGSARRLTLEFASDPGPLPLKTATLVSDEGLRKNYLIQREDISLVKILSEVGSERGLKDVALHEPDIEEVIRT FYQGRNARARAS
Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]
COG id: COG4586
COG function: function code R; ABC-type uncharacterized transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=250, Percent_Identity=27.6, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI30795238, Length=250, Percent_Identity=27.6, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27262624, Length=232, Percent_Identity=28.448275862069, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI27262626, Length=232, Percent_Identity=28.448275862069, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=32.093023255814, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436953, Length=244, Percent_Identity=30.327868852459, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI45446740, Length=299, Percent_Identity=26.4214046822742, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI47078218, Length=299, Percent_Identity=26.4214046822742, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI150417984, Length=302, Percent_Identity=26.4900662251656, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI116734710, Length=311, Percent_Identity=27.0096463022508, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27477115, Length=239, Percent_Identity=28.0334728033473, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI6005701, Length=214, Percent_Identity=29.9065420560748, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI21536376, Length=220, Percent_Identity=26.3636363636364, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI105990541, Length=228, Percent_Identity=28.5087719298246, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31657092, Length=230, Percent_Identity=29.1304347826087, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI157502203, Length=298, Percent_Identity=27.8523489932886, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI87081782, Length=219, Percent_Identity=35.1598173515982, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI48994943, Length=222, Percent_Identity=31.5315315315315, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=32.034632034632, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1790467, Length=253, Percent_Identity=28.0632411067194, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87081791, Length=216, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=30.5936073059361, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786398, Length=207, Percent_Identity=30.9178743961353, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87081709, Length=237, Percent_Identity=25.3164556962025, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789864, Length=240, Percent_Identity=29.1666666666667, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1789593, Length=202, Percent_Identity=28.7128712871287, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=26.027397260274, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=32.5242718446602, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786703, Length=217, Percent_Identity=29.9539170506912, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=28.6407766990291, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789891, Length=214, Percent_Identity=27.5700934579439, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788210, Length=235, Percent_Identity=27.6595744680851, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=26.6990291262136, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787029, Length=216, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786563, Length=201, Percent_Identity=26.865671641791, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=25.8373205741627, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=28.2296650717703, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790190, Length=250, Percent_Identity=27.2, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787370, Length=205, Percent_Identity=24.8780487804878, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786253, Length=211, Percent_Identity=26.0663507109005, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790544, Length=258, Percent_Identity=24.8062015503876, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87082267, Length=207, Percent_Identity=25.6038647342995, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=28.0952380952381, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786345, Length=207, Percent_Identity=29.4685990338164, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI48994883, Length=228, Percent_Identity=27.6315789473684, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788053, Length=204, Percent_Identity=31.3725490196078, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=24.8888888888889, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=213, Percent_Identity=28.6384976525822, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787112, Length=210, Percent_Identity=32.3809523809524, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788165, Length=203, Percent_Identity=26.6009852216749, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786698, Length=213, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788506, Length=268, Percent_Identity=26.1194029850746, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48995001, Length=207, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790739, Length=216, Percent_Identity=26.8518518518519, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788897, Length=241, Percent_Identity=26.9709543568465, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI48994997, Length=228, Percent_Identity=26.7543859649123, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787792, Length=218, Percent_Identity=27.5229357798165, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=225, Percent_Identity=26.2222222222222, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789672, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787105, Length=199, Percent_Identity=32.1608040201005, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788472, Length=255, Percent_Identity=24.7058823529412, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789586, Length=231, Percent_Identity=22.9437229437229, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789991, Length=253, Percent_Identity=25.6916996047431, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787500, Length=200, Percent_Identity=26, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI2367384, Length=201, Percent_Identity=28.8557213930348, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1789963, Length=222, Percent_Identity=26.5765765765766, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533608, Length=239, Percent_Identity=27.1966527196653, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71983516, Length=304, Percent_Identity=25.3289473684211, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71983510, Length=304, Percent_Identity=25.3289473684211, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71983523, Length=304, Percent_Identity=25.3289473684211, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17510237, Length=223, Percent_Identity=24.6636771300448, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17565586, Length=302, Percent_Identity=24.1721854304636, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17567265, Length=207, Percent_Identity=31.4009661835749, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193211017, Length=294, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71996809, Length=294, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193211015, Length=294, Percent_Identity=27.5510204081633, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=265, Percent_Identity=24.9056603773585, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320874, Length=246, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323217, Length=227, Percent_Identity=29.5154185022026, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=29.3859649122807, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24643674, Length=237, Percent_Identity=30.379746835443, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI28573573, Length=240, Percent_Identity=28.75, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI28573571, Length=229, Percent_Identity=29.6943231441048, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI221512771, Length=231, Percent_Identity=29.004329004329, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24582014, Length=184, Percent_Identity=29.3478260869565, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24582012, Length=184, Percent_Identity=29.3478260869565, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28574150, Length=235, Percent_Identity=26.3829787234043, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI116007328, Length=235, Percent_Identity=26.3829787234043, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI281362751, Length=186, Percent_Identity=28.494623655914, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24650855, Length=185, Percent_Identity=28.6486486486486, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24650853, Length=185, Percent_Identity=28.6486486486486, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI116007184, Length=219, Percent_Identity=27.3972602739726, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=27.3972602739726, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648314, Length=224, Percent_Identity=25.4464285714286, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI85725262, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28571209, Length=334, Percent_Identity=21.5568862275449, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI85726357, Length=281, Percent_Identity=25.2669039145907, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI19920532, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24580930, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 37306; Mature: 37175
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALIEARGVSKRFRQHKRFPGFLGALKTLVTSEYTEVLAVSDIDFDVAAGEAVGYLGPN CCCEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCEEECCCEEECCCCC GAGKSTMIKMMTGILVPSAGTLSVLGRTPHLSRMDNAREIGVVFGQRSQLWWDLPLVDSF CCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCEEHEEECCCCCEEEECCCCCHH TLHQRIYDIPFARYADNLRRFSELLDLTPFLDRAVRQLSLGQRMRAEIVMSLLHDPKILF HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LDEPTIGLDVVAKDAVRRFLAEINRERGVTIILTTHDLQDIETICPRLIMVDHSRLIFDG EECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHEEECCCEEEECH ELRSLRAALGSARRLTLEFASDPGPLPLKTATLVSDEGLRKNYLIQREDISLVKILSEVG HHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHH SERGLKDVALHEPDIEEVIRTFYQGRNARARAS HHCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TALIEARGVSKRFRQHKRFPGFLGALKTLVTSEYTEVLAVSDIDFDVAAGEAVGYLGPN CCEEHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCCEEECCCEEECCCCC GAGKSTMIKMMTGILVPSAGTLSVLGRTPHLSRMDNAREIGVVFGQRSQLWWDLPLVDSF CCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCEEHEEECCCCCEEEECCCCCHH TLHQRIYDIPFARYADNLRRFSELLDLTPFLDRAVRQLSLGQRMRAEIVMSLLHDPKILF HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LDEPTIGLDVVAKDAVRRFLAEINRERGVTIILTTHDLQDIETICPRLIMVDHSRLIFDG EECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCHHEEECCCEEEECH ELRSLRAALGSARRLTLEFASDPGPLPLKTATLVSDEGLRKNYLIQREDISLVKILSEVG HHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHH SERGLKDVALHEPDIEEVIRTFYQGRNARARAS HHCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9106203; 9274031; 9384377 [H]