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The map label for this gene is aglR [H]

Identifier: 209549692

GI number: 209549692

Start: 2161127

End: 2162167

Strand: Direct

Name: aglR [H]

Synonym: Rleg2_2099

Alternate gene names: 209549692

Gene position: 2161127-2162167 (Clockwise)

Preceding gene: 209549679

Following gene: 209549693

Centisome position: 47.62

GC content: 65.23

Gene sequence:

>1041_bases
ATGGAAAACAAGGGAAATTTCGGGCAAGCAGCATCGCCAGCGGCGCGCGAGCGCCCGACGTTGAAGACGATCGCCTTCAT
GACCGGCCTCGGCGTGACGACAGTATCGCGCGCCTTGAAGGATGCGCCCGACATCGGGGCGGAAACCAAAGAGCGGGTGC
GCATGGTCGCCCGACAGCTCGGTTACCAGCCGAATAGAGCCGGCGTGCGCCTGCGCACCGGCAAGACCAACGTCATCGCC
CTCGTCCTCAGCATCGACGAGGAGATCATGGGCTTTTCAAGCCAGATGGTCTTCGGCATCTCCGAGGTCCTGTCCGGCAC
GCCCTACCATATCGTCGTCACGCCGCATTCCCACAGCAAGGATCCGATGCTGCCGGTGCGCTACATCCTCGATACCGGCT
CGGCCGACGGCGTGATCATCTCGCGCATCGAGCCGGACGATCCGCGCGTGCGGCTGCTGACCGAGCGCGGCATGCCCTTC
GCCACCCATGGGCGCACCGACGCCGGTCTGACGCATCCTTTCCACGACTTCAACAACGAAGCCTTCGCTCACCAGGCGGT
GGAACGGCTCGTCAAACGCGGCCGGCGGCGCATCGCCCTGCTGCAGCCGCCGAGCAAGCTCACCTATTACGCCCATATCC
GCATCGGCTTCCAGACCGGCCTGCATGACTACGGCGCCGAGGAAGTGCCGCTGCGCGTCAACAGCGACGCGCCCCTCGCC
GACATTCGCGACGTCGTCGAGGTGATGATGCGCTCACCCAATGCCCCTGATGGCATCGTCTGTTCGGCCGGCAGCGCGGC
AATCGCCGTCAACGCCGGCATCGAGGCCGCCGGCAAGGCCCTTGGCCGCGATCTCGACATGGTATCCAAGCAATCGGTGC
CGATCCTCAACTGGATTCGCCCGGAGATCATCACCGTCCAGGAAGACGTGCGCCAGGCCGGCCGCGAAATGGCCAAAGCC
GTCATCGCCCGCATCGACGGCGTCGAACCGGAACTGCTGCAGAGCATCAGCCAGCCGATCTGGCCTGAGGGCGGCAGGTA
A

Upstream 100 bases:

>100_bases
GCGCTTCTTAGGGAGGCGCGATTTTGGCGGGCGGCGGGCTTACGGCGCCTGAAAAAGCCTCTATAAGCGACACCAATTCG
CGCGAGGCAGGCCTACAGGG

Downstream 100 bases:

>100_bases
GGCGGATTGAGACGCGCGACTCGTCGGGTTGGTGGCTCAAATCGGTTCCAGCGACGTAGTGAGCTCAGCTCTCCCCCAAC
TCACCGCGCCAATCGCAAGC

Product: LacI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MENKGNFGQAASPAARERPTLKTIAFMTGLGVTTVSRALKDAPDIGAETKERVRMVARQLGYQPNRAGVRLRTGKTNVIA
LVLSIDEEIMGFSSQMVFGISEVLSGTPYHIVVTPHSHSKDPMLPVRYILDTGSADGVIISRIEPDDPRVRLLTERGMPF
ATHGRTDAGLTHPFHDFNNEAFAHQAVERLVKRGRRRIALLQPPSKLTYYAHIRIGFQTGLHDYGAEEVPLRVNSDAPLA
DIRDVVEVMMRSPNAPDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIRPEIITVQEDVRQAGREMAKA
VIARIDGVEPELLQSISQPIWPEGGR

Sequences:

>Translated_346_residues
MENKGNFGQAASPAARERPTLKTIAFMTGLGVTTVSRALKDAPDIGAETKERVRMVARQLGYQPNRAGVRLRTGKTNVIA
LVLSIDEEIMGFSSQMVFGISEVLSGTPYHIVVTPHSHSKDPMLPVRYILDTGSADGVIISRIEPDDPRVRLLTERGMPF
ATHGRTDAGLTHPFHDFNNEAFAHQAVERLVKRGRRRIALLQPPSKLTYYAHIRIGFQTGLHDYGAEEVPLRVNSDAPLA
DIRDVVEVMMRSPNAPDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIRPEIITVQEDVRQAGREMAKA
VIARIDGVEPELLQSISQPIWPEGGR
>Mature_346_residues
MENKGNFGQAASPAARERPTLKTIAFMTGLGVTTVSRALKDAPDIGAETKERVRMVARQLGYQPNRAGVRLRTGKTNVIA
LVLSIDEEIMGFSSQMVFGISEVLSGTPYHIVVTPHSHSKDPMLPVRYILDTGSADGVIISRIEPDDPRVRLLTERGMPF
ATHGRTDAGLTHPFHDFNNEAFAHQAVERLVKRGRRRIALLQPPSKLTYYAHIRIGFQTGLHDYGAEEVPLRVNSDAPLA
DIRDVVEVMMRSPNAPDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIRPEIITVQEDVRQAGREMAKA
VIARIDGVEPELLQSISQPIWPEGGR

Specific function: Probable regulatory protein for the binding-protein- dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=314, Percent_Identity=22.6114649681529, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787906, Length=294, Percent_Identity=25.8503401360544, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37731; Mature: 37731

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKGNFGQAASPAARERPTLKTIAFMTGLGVTTVSRALKDAPDIGAETKERVRMVARQL
CCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GYQPNRAGVRLRTGKTNVIALVLSIDEEIMGFSSQMVFGISEVLSGTPYHIVVTPHSHSK
CCCCCCCCEEEEECCCEEEEEEEECCHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
DPMLPVRYILDTGSADGVIISRIEPDDPRVRLLTERGMPFATHGRTDAGLTHPFHDFNNE
CCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHCCCH
AFAHQAVERLVKRGRRRIALLQPPSKLTYYAHIRIGFQTGLHDYGAEEVPLRVNSDAPLA
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEEECCCHHCCCCCCCEEECCCCCHH
DIRDVVEVMMRSPNAPDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIR
HHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHHHHCCCHHHHHCCCCCHHHHCC
PEIITVQEDVRQAGREMAKAVIARIDGVEPELLQSISQPIWPEGGR
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MENKGNFGQAASPAARERPTLKTIAFMTGLGVTTVSRALKDAPDIGAETKERVRMVARQL
CCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GYQPNRAGVRLRTGKTNVIALVLSIDEEIMGFSSQMVFGISEVLSGTPYHIVVTPHSHSK
CCCCCCCCEEEEECCCEEEEEEEECCHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
DPMLPVRYILDTGSADGVIISRIEPDDPRVRLLTERGMPFATHGRTDAGLTHPFHDFNNE
CCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCHHCCCH
AFAHQAVERLVKRGRRRIALLQPPSKLTYYAHIRIGFQTGLHDYGAEEVPLRVNSDAPLA
HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEEEECCCHHCCCCCCCEEECCCCCHH
DIRDVVEVMMRSPNAPDGIVCSAGSAAIAVNAGIEAAGKALGRDLDMVSKQSVPILNWIR
HHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHHHHCCCHHHHHCCCCCHHHHCC
PEIITVQEDVRQAGREMAKAVIARIDGVEPELLQSISQPIWPEGGR
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]