| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549654
Identifier: 209549654
GI number: 209549654
Start: 2125372
End: 2126190
Strand: Direct
Name: 209549654
Synonym: Rleg2_2061
Alternate gene names: NA
Gene position: 2125372-2126190 (Clockwise)
Preceding gene: 209549652
Following gene: 209549655
Centisome position: 46.84
GC content: 64.1
Gene sequence:
>819_bases ATGGCAAAGAAGATCGACGAAGAAGCCCTTGGCGAGGCTTATAACCGCGCTCTGGCGCTGGAAAAGGCCGGCGATGTCGA CGCGGCCGTTGCAGCCTATGAGGAAGTCCTGGCGATTGATCCCGACGATCATGGCGGTGCAGCCGTGCGCATCGCCGCGA TGGGCCGGGGCGAGACGCCGGTCAGGGCGCCGGACGCCTATGTCGAGACCCTGTTCGACCAGCATGCCGAGGTTTTCGAA GACGTGCTCGTCGAGCAGCTCGGCTATCACGTGCCGATGCTGGTGCGCCAGCGGCTGCAGGCGCTGAAGCTCGGGCCGTT CAAGCGACTGCTCGATCTCGGCTGCGGCACGGGCCTCACCGGCGGCGCGCTGCGCGACCTCTGCGCCGATATGACCGGCC TCGACCTTTCGGAGAAGATGGTCGAGGTCGCCCATGAGAAGGATCTCTACGAGACGCTCTTCGTCGCCGAGGTCGAGGAC TTCCTCGACGACAATGATGAGGAAGCCTTCGACATCATCACCGCCACCGACGTGCTGCCCTATCTCGGCGCGCTCGAACC GCTGTTCTTCGGCGCCGCCGAGAACCTGACGTCCGGCGGCCTGTTCATCTTCTCCTCGGAAACCCTGCCGGAGGAGACCC TTGCCGGCCGCGCCTACATGGTCGGCCCGCACCAGCGCTTCGCCCATGCCGACGCCTATGTGAAAGAACGTCTGGCGGCA ACCGGCTTCGAACTCATCGAGATATCGGATATCAATGTGCGCATGGAAGACGGCCAGCCGACGCCCGGCCATCTGGTGAT CGCCAGATATATCGGCTGA
Upstream 100 bases:
>100_bases TCGTCTTGTTTTTGGCCATTCTGCGCCCACAGCCACGCCATTGCAAAACATCGAAAGCCGCCTTAGACGCATGCGTGAAA CAAAAGGACGGCGGACTGCT
Downstream 100 bases:
>100_bases GGCAATAGTTACACGATCGACGAACTATCTGTTGCGCATTGCTTTCCGACCTGATACTTAGTCGGTCGGTAAAGTTTTCC ACCTAACAGGAAAGGTCGCC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; 3-Demethylubiquinone-9 3-Methyltransferase; Methyltransferase Protein; SAM-Dependent Methyltransferase; TPR Repeat-Containing Protein; SAM-Dependent Methyltransferases; Protein With TPR Motifs; LOW QUALITY PROTEIN Methyltransferase; TPR Repeat-Containing Methyltransferase; Two Domain Fusion Protein; Methyltransferase Domain Family; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAKKIDEEALGEAYNRALALEKAGDVDAAVAAYEEVLAIDPDDHGGAAVRIAAMGRGETPVRAPDAYVETLFDQHAEVFE DVLVEQLGYHVPMLVRQRLQALKLGPFKRLLDLGCGTGLTGGALRDLCADMTGLDLSEKMVEVAHEKDLYETLFVAEVED FLDDNDEEAFDIITATDVLPYLGALEPLFFGAAENLTSGGLFIFSSETLPEETLAGRAYMVGPHQRFAHADAYVKERLAA TGFELIEISDINVRMEDGQPTPGHLVIARYIG
Sequences:
>Translated_272_residues MAKKIDEEALGEAYNRALALEKAGDVDAAVAAYEEVLAIDPDDHGGAAVRIAAMGRGETPVRAPDAYVETLFDQHAEVFE DVLVEQLGYHVPMLVRQRLQALKLGPFKRLLDLGCGTGLTGGALRDLCADMTGLDLSEKMVEVAHEKDLYETLFVAEVED FLDDNDEEAFDIITATDVLPYLGALEPLFFGAAENLTSGGLFIFSSETLPEETLAGRAYMVGPHQRFAHADAYVKERLAA TGFELIEISDINVRMEDGQPTPGHLVIARYIG >Mature_271_residues AKKIDEEALGEAYNRALALEKAGDVDAAVAAYEEVLAIDPDDHGGAAVRIAAMGRGETPVRAPDAYVETLFDQHAEVFED VLVEQLGYHVPMLVRQRLQALKLGPFKRLLDLGCGTGLTGGALRDLCADMTGLDLSEKMVEVAHEKDLYETLFVAEVEDF LDDNDEEAFDIITATDVLPYLGALEPLFFGAAENLTSGGLFIFSSETLPEETLAGRAYMVGPHQRFAHADAYVKERLAAT GFELIEISDINVRMEDGQPTPGHLVIARYIG
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29589; Mature: 29458
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKIDEEALGEAYNRALALEKAGDVDAAVAAYEEVLAIDPDDHGGAAVRIAAMGRGETP CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCC VRAPDAYVETLFDQHAEVFEDVLVEQLGYHVPMLVRQRLQALKLGPFKRLLDLGCGTGLT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GGALRDLCADMTGLDLSEKMVEVAHEKDLYETLFVAEVEDFLDDNDEEAFDIITATDVLP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLGALEPLFFGAAENLTSGGLFIFSSETLPEETLAGRAYMVGPHQRFAHADAYVKERLAA HHHHHHHHHHCCHHCCCCCCEEEEECCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHH TGFELIEISDINVRMEDGQPTPGHLVIARYIG CCCEEEEEEECEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure AKKIDEEALGEAYNRALALEKAGDVDAAVAAYEEVLAIDPDDHGGAAVRIAAMGRGETP CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCC VRAPDAYVETLFDQHAEVFEDVLVEQLGYHVPMLVRQRLQALKLGPFKRLLDLGCGTGLT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC GGALRDLCADMTGLDLSEKMVEVAHEKDLYETLFVAEVEDFLDDNDEEAFDIITATDVLP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLGALEPLFFGAAENLTSGGLFIFSSETLPEETLAGRAYMVGPHQRFAHADAYVKERLAA HHHHHHHHHHCCHHCCCCCCEEEEECCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHH TGFELIEISDINVRMEDGQPTPGHLVIARYIG CCCEEEEEEECEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA