| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 209549649
GI number: 209549649
Start: 2121555
End: 2122328
Strand: Direct
Name: artJ [H]
Synonym: Rleg2_2056
Alternate gene names: 209549649
Gene position: 2121555-2122328 (Clockwise)
Preceding gene: 209549647
Following gene: 209549650
Centisome position: 46.75
GC content: 59.17
Gene sequence:
>774_bases ATGCATATCTCCACCCGTATTTTCGCGGCAGCCTCGATCGCGGCGATGTCCCTTTTCGCCGGCTCGGCCATGGCCGATGG CGAGAAGTATGTGATCGGCACCGATTCGACCTATCCGCCCTTCGAGTTCGTCGATGCCAGCGGCACGATCCAGGGCTTCG ACATCGACATCACGAAGGCGCTTTGTGCCGAGATGAAGGCTGAATGCTCCTTCGTCAGCACCGACTGGGACGGCATCATC CCGGCGCTCAACGCCAAGAAGTTCGACATGATCGTTTCCTCCATGTCGATCACGCCGGAGCGCCTGAAGCTCGTCGACTT CTCCAACAAGTACTACAACACCCCGCCGGCCATCGCCGTGCCGAAGGATTCGAAGATCACCGACGTTGCCGGCCTCAAAG GCAAGGTGATCGGCGCACAGACCTCGACAACGCACGCCAACTACGCCGAGAAGCACCTGGCCGACACCGAACTGAAGCTC TATCCGACGGCTGACGAATACAAGCTCGACGTCTCCAGCGGCCGTGTCGACGCCGTCATCGACGACGTCGTCGTTCTCTC CGAATGGGTGAAATCCGACGCCGGCGCCTGCTGCAAGATCCTGACCACCCTGCCGGTCGACAAGGAAATCAACGGCAACG GCGCAGGCATTGCCATCCGTAAAGGCGATCCGCTCAAGGAAAAGCTGAACACGGCAATCGCTGCGATCCGCGCCAGCGGT GAATACAAGAAGATCCAGGACAAGTACTTCGACTTCGACGTTTACGGCGAATAA
Upstream 100 bases:
>100_bases AAAAAAGTCTGATTATCGCCGCAAGGCGGTCTCGGACCGTTGAACTGCAGCCGTCAGCCCGCGAGAAAAAGAGCGGCGGC TACCAACAGAGAGGATCCTC
Downstream 100 bases:
>100_bases GAAATTCGCTATCTGGCCAGTCAAGGTAATGGCGGAAGGCTTGCTCTTCCGCCATTTTTGTTTGACAAAGATGGCAAGAT CAAAACGGCAAAAGCCGTGA
Product: family 3 extracellular solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MHISTRIFAAASIAAMSLFAGSAMADGEKYVIGTDSTYPPFEFVDASGTIQGFDIDITKALCAEMKAECSFVSTDWDGII PALNAKKFDMIVSSMSITPERLKLVDFSNKYYNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLADTELKL YPTADEYKLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDPLKEKLNTAIAAIRASG EYKKIQDKYFDFDVYGE
Sequences:
>Translated_257_residues MHISTRIFAAASIAAMSLFAGSAMADGEKYVIGTDSTYPPFEFVDASGTIQGFDIDITKALCAEMKAECSFVSTDWDGII PALNAKKFDMIVSSMSITPERLKLVDFSNKYYNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLADTELKL YPTADEYKLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDPLKEKLNTAIAAIRASG EYKKIQDKYFDFDVYGE >Mature_257_residues MHISTRIFAAASIAAMSLFAGSAMADGEKYVIGTDSTYPPFEFVDASGTIQGFDIDITKALCAEMKAECSFVSTDWDGII PALNAKKFDMIVSSMSITPERLKLVDFSNKYYNTPPAIAVPKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLADTELKL YPTADEYKLDVSSGRVDAVIDDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDPLKEKLNTAIAAIRASG EYKKIQDKYFDFDVYGE
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=39.4308943089431, Blast_Score=178, Evalue=3e-46, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=38.4, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=40.8695652173913, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788649, Length=256, Percent_Identity=37.109375, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1787031, Length=242, Percent_Identity=32.2314049586777, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788228, Length=258, Percent_Identity=28.6821705426357, Blast_Score=110, Evalue=8e-26,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27733; Mature: 27733
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHISTRIFAAASIAAMSLFAGSAMADGEKYVIGTDSTYPPFEFVDASGTIQGFDIDITKA CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEEHHHHH LCAEMKAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKLVDFSNKYYNTPPAIAV HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCEEE PKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLADTELKLYPTADEYKLDVSSGRVDAVI CCCCCCEEECCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHH DDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDPLKEKLNTAIAAIRASG HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC EYKKIQDKYFDFDVYGE CHHHHHHHHCCEEECCC >Mature Secondary Structure MHISTRIFAAASIAAMSLFAGSAMADGEKYVIGTDSTYPPFEFVDASGTIQGFDIDITKA CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEEEEHHHHH LCAEMKAECSFVSTDWDGIIPALNAKKFDMIVSSMSITPERLKLVDFSNKYYNTPPAIAV HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCEEE PKDSKITDVAGLKGKVIGAQTSTTHANYAEKHLADTELKLYPTADEYKLDVSSGRVDAVI CCCCCCEEECCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHH DDVVVLSEWVKSDAGACCKILTTLPVDKEINGNGAGIAIRKGDPLKEKLNTAIAAIRASG HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC EYKKIQDKYFDFDVYGE CHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]