| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is gno [H]
Identifier: 209549630
GI number: 209549630
Start: 2099794
End: 2100582
Strand: Direct
Name: gno [H]
Synonym: Rleg2_2037
Alternate gene names: 209549630
Gene position: 2099794-2100582 (Clockwise)
Preceding gene: 209549629
Following gene: 209549631
Centisome position: 46.27
GC content: 62.1
Gene sequence:
>789_bases GTGTCCGACATCACTCTGAACGCCCCGAAGCTTTTCGATCTCAGCGGCCGGGTTGCCATCGTCACCGGGGCCGGAAGCGG CATCGGGCAGCGCATTGCCATCGGCCTTGCCCAATGCGGCGCCGACGTGGCCCTGCTCGACCGTCGAACCGACGACGGAT TGGCCAGGACGGCTGAACATATCAGCGCCGCCGGCCGCCGCTCGATCCAGATCGCGGCTGACGTCACGAACAAATCTTCG CTTGGAGATGCGGTCGCACGCACCGAAGCCGATCTCGGCGCCTTGACGCTTGCCGTCAACGCGGCTGGCATCGCCAACGC GAACCCGGCGGAGGAGATGGAGGAGGACCAATATCAGACGTTGATGGATATCAACCTGAAAGGCATCTTCCTTTCCTGCC AGGCCGAGGCTCGCGCCATGCTGAAGAACGGATGCGGCTCCATCGTCAACATTGCTTCCATGTCGGGCGTGATCGTCAAC CGGGGGCTGAACCAAGCGCATTACAACGCCTCCAAGGCAGGCGTCATCCATATGTCGAAGTCGTTGGCCATGGAATGGGT CGGCCGCGGCATTCGCGTCAACACCATTTCCCCCGGCTACACGGCAACGCCCATGAACACCCGTCCGGAGATGGTCCACC AGACCAAGCTCTTCGAAGAGCAGACGCCGATGCAGCGCATGGCTGATGTCGACGAGATGGTCGGTCCGGCGGTGTTCCTG CTGTCGAATGCAGCAAGCTTCGTGACCGGCGTCGATCTTCTCGTCGACGGTGGTTTCTGCTGCTGGTGA
Upstream 100 bases:
>100_bases GCCCAAGGCAAGCAGGCGGGGATCCTCGATCGTGACCAGGCAAATGACGTCTCGGTCATGGAGCTAGCTACTATCTAAAC AAACAGAGAAAGGAAGAGCG
Downstream 100 bases:
>100_bases GCCGATGAGGCGTTCACCGCCGGCAAGTCGAAATGAACGGTCTCGCTTCCTCCCTGGCTGAGATCGAGGCTGAAGGGAGC AACGGGCCAGACGGCGTGCG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSDITLNAPKLFDLSGRVAIVTGAGSGIGQRIAIGLAQCGADVALLDRRTDDGLARTAEHISAAGRRSIQIAADVTNKSS LGDAVARTEADLGALTLAVNAAGIANANPAEEMEEDQYQTLMDINLKGIFLSCQAEARAMLKNGCGSIVNIASMSGVIVN RGLNQAHYNASKAGVIHMSKSLAMEWVGRGIRVNTISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMADVDEMVGPAVFL LSNAASFVTGVDLLVDGGFCCW
Sequences:
>Translated_262_residues MSDITLNAPKLFDLSGRVAIVTGAGSGIGQRIAIGLAQCGADVALLDRRTDDGLARTAEHISAAGRRSIQIAADVTNKSS LGDAVARTEADLGALTLAVNAAGIANANPAEEMEEDQYQTLMDINLKGIFLSCQAEARAMLKNGCGSIVNIASMSGVIVN RGLNQAHYNASKAGVIHMSKSLAMEWVGRGIRVNTISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMADVDEMVGPAVFL LSNAASFVTGVDLLVDGGFCCW >Mature_261_residues SDITLNAPKLFDLSGRVAIVTGAGSGIGQRIAIGLAQCGADVALLDRRTDDGLARTAEHISAAGRRSIQIAADVTNKSSL GDAVARTEADLGALTLAVNAAGIANANPAEEMEEDQYQTLMDINLKGIFLSCQAEARAMLKNGCGSIVNIASMSGVIVNR GLNQAHYNASKAGVIHMSKSLAMEWVGRGIRVNTISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMADVDEMVGPAVFLL SNAASFVTGVDLLVDGGFCCW
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=33.4615384615385, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=35.408560311284, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=31.6, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=30.4526748971193, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI7705925, Length=260, Percent_Identity=30.3846153846154, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=31.7829457364341, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=29.1338582677165, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=32.6086956521739, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=28.957528957529, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=31.8181818181818, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4503301, Length=253, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=28.6821705426357, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI310128830, Length=178, Percent_Identity=25.2808988764045, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI310115468, Length=178, Percent_Identity=25.2808988764045, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=30.3482587064677, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4503817, Length=226, Percent_Identity=28.7610619469027, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI142976729, Length=200, Percent_Identity=25, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=27.8884462151394, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI226371731, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI83715985, Length=259, Percent_Identity=29.3436293436293, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=197, Percent_Identity=25.3807106598985, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4557649, Length=200, Percent_Identity=29, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=34.7826086956522, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=34.6774193548387, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=32.9317269076305, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=33.9920948616601, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=32.6693227091633, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082160, Length=265, Percent_Identity=31.6981132075472, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=33.0645161290323, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=31.8725099601594, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=30.46875, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=28.6821705426357, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789378, Length=239, Percent_Identity=30.5439330543933, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1787526, Length=204, Percent_Identity=32.843137254902, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=27.2357723577236, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=30.0546448087432, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=36.4, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=35.0806451612903, Blast_Score=123, Evalue=9e-29, Organism=Caenorhabditis elegans, GI115534694, Length=257, Percent_Identity=32.6848249027237, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17536025, Length=265, Percent_Identity=30.9433962264151, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.5220883534137, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=28.0769230769231, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=30.2681992337165, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538182, Length=211, Percent_Identity=33.175355450237, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=28.735632183908, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=26.3940520446097, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=27.5862068965517, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.3172690763052, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=31.0606060606061, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17560676, Length=261, Percent_Identity=29.8850574712644, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=27.6923076923077, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=26.4925373134328, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=25.5725190839695, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=28.6259541984733, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.8625954198473, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=27.1698113207547, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=31.0344827586207, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=28.3018867924528, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=31.4432989690722, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=27.5590551181102, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=25.8883248730964, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=26.1538461538462, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508895, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567345, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI32563809, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17507613, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=26.8939393939394, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17555612, Length=230, Percent_Identity=28.2608695652174, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=27.6119402985075, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=25.0950570342205, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=265, Percent_Identity=31.3207547169811, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=37.8486055776892, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=32.9365079365079, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.8709677419355, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=33.4677419354839, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=31.9230769230769, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.4661354581673, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=33.7254901960784, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI17737361, Length=231, Percent_Identity=32.4675324675325, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=28.125, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28574402, Length=212, Percent_Identity=30.6603773584906, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24584744, Length=212, Percent_Identity=30.6603773584906, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI18859837, Length=216, Percent_Identity=29.6296296296296, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640492, Length=211, Percent_Identity=27.0142180094787, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI161076933, Length=212, Percent_Identity=27.3584905660377, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584748, Length=212, Percent_Identity=27.3584905660377, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281364892, Length=209, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=28.1609195402299, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24581726, Length=257, Percent_Identity=24.124513618677, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI221331218, Length=249, Percent_Identity=29.718875502008, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24649181, Length=213, Percent_Identity=30.0469483568075, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665243, Length=235, Percent_Identity=30.2127659574468, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24584752, Length=212, Percent_Identity=30.188679245283, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221331216, Length=250, Percent_Identity=29.6, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641232, Length=196, Percent_Identity=31.6326530612245, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24665247, Length=236, Percent_Identity=30.0847457627119, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 27599; Mature: 27468
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00061 ADH_SHORT ; PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITLNAPKLFDLSGRVAIVTGAGSGIGQRIAIGLAQCGADVALLDRRTDDGLARTAEH CCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH ISAAGRRSIQIAADVTNKSSLGDAVARTEADLGALTLAVNAAGIANANPAEEMEEDQYQT HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LMDINLKGIFLSCQAEARAMLKNGCGSIVNIASMSGVIVNRGLNQAHYNASKAGVIHMSK HHCCCEEEEEEECCHHHHHHHHCCCCCCEEHHHHCCEEEECCCCHHHCCCCCCCEEEEHH SLAMEWVGRGIRVNTISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMADVDEMVGPAVFL HHHHHHHCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LSNAASFVTGVDLLVDGGFCCW HHHHHHHHHHHHHEECCCEECC >Mature Secondary Structure SDITLNAPKLFDLSGRVAIVTGAGSGIGQRIAIGLAQCGADVALLDRRTDDGLARTAEH CCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH ISAAGRRSIQIAADVTNKSSLGDAVARTEADLGALTLAVNAAGIANANPAEEMEEDQYQT HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH LMDINLKGIFLSCQAEARAMLKNGCGSIVNIASMSGVIVNRGLNQAHYNASKAGVIHMSK HHCCCEEEEEEECCHHHHHHHHCCCCCCEEHHHHCCEEEECCCCHHHCCCCCCCEEEEHH SLAMEWVGRGIRVNTISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMADVDEMVGPAVFL HHHHHHHCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LSNAASFVTGVDLLVDGGFCCW HHHHHHHHHHHHHEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]