Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is ubiE [H]

Identifier: 209549619

GI number: 209549619

Start: 2087572

End: 2088357

Strand: Reverse

Name: ubiE [H]

Synonym: Rleg2_2026

Alternate gene names: 209549619

Gene position: 2088357-2087572 (Counterclockwise)

Preceding gene: 209549623

Following gene: 209549617

Centisome position: 46.02

GC content: 61.45

Gene sequence:

>786_bases
ATGAATTCGATGAATACAAATTACTCCATCCGCGACGAAATCCGCGATTTCTGGTCGGAGAGGGCTGAAACCTTCGACCA
GAGCGTCGGCCATGAAATCTTTTCGGAAGGCGAGCGGAAGGGCTGGCAGCGGCTGATCAGAAAGCATCTCGGCGCGGGGC
AGGGACGGGCAGCGCTCGATCTTGCCTGCGGCACCGCCGTGATCTCGCATCTGATGCATGATGTCGGCTTCAAGGTCACC
GGGCTCGACTGGTCGGATGCGATGCTGGCGCAGGCGCGCGCCAAGGCGAAGAAGCGCGGCACCGATATCCGCTTCGTTTC
CGGCGACGCCGAAAACACCATGGAGCCGCGGGACAGCTACGACGTCATCACCAACCGGCATCTCGTCTGGACGCTGGTCG
ACCCGGCTTCGGCCTTCAAAGAATGGTTCGCGGTGCTGAAGCCGGGCGGCAAGGTGTTGATCGTCGACGGCAACATGGGC
AGGGAGACCTGGGTCAAAGGCCTGCAGAAGCTTTGGACGAAAATCACGGGCAAGCCTGCGGCGAGCCACATGTCGCCTGA
GATGATGGCGCGGCACCAGAAGATCCGCTCCCGCGTGCATTTCTCCCACGAGATGCCGGCCGAAGCGATCGTCGAGCTTC
TGCGCAAGGCCGGTTTCGTCGACATCGTGATCGACCGCAAGCTTGGAGATATTCACTGGGCGCAGGCGCGCAAGATGCCG
TTTCTGCGCGGGCTGGAGCGGATGGTGCAGGAACGGTTTGCGATTTGTGCGCGTAAGCCTGGGTGA

Upstream 100 bases:

>100_bases
ACGTCTGAATAATGTCCGCAGGCATAAGAAATATGACTTTGTGAATCAAGTTATATGTTTTAGAGCGTTTCCAAACTGAT
CCGATGCCGGGGCTCTCAAG

Downstream 100 bases:

>100_bases
GGGGGGTCCCCTTCTCCCCAGCGGGGGTCCGAAGGACGGGTCGAGACCTGTGGCTCGACCCCGGTCGGTGGCCCGAAGGG
GCGGATGAGGGGCCTGCGGC

Product: type 11 methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNSMNTNYSIRDEIRDFWSERAETFDQSVGHEIFSEGERKGWQRLIRKHLGAGQGRAALDLACGTAVISHLMHDVGFKVT
GLDWSDAMLAQARAKAKKRGTDIRFVSGDAENTMEPRDSYDVITNRHLVWTLVDPASAFKEWFAVLKPGGKVLIVDGNMG
RETWVKGLQKLWTKITGKPAASHMSPEMMARHQKIRSRVHFSHEMPAEAIVELLRKAGFVDIVIDRKLGDIHWAQARKMP
FLRGLERMVQERFAICARKPG

Sequences:

>Translated_261_residues
MNSMNTNYSIRDEIRDFWSERAETFDQSVGHEIFSEGERKGWQRLIRKHLGAGQGRAALDLACGTAVISHLMHDVGFKVT
GLDWSDAMLAQARAKAKKRGTDIRFVSGDAENTMEPRDSYDVITNRHLVWTLVDPASAFKEWFAVLKPGGKVLIVDGNMG
RETWVKGLQKLWTKITGKPAASHMSPEMMARHQKIRSRVHFSHEMPAEAIVELLRKAGFVDIVIDRKLGDIHWAQARKMP
FLRGLERMVQERFAICARKPG
>Mature_261_residues
MNSMNTNYSIRDEIRDFWSERAETFDQSVGHEIFSEGERKGWQRLIRKHLGAGQGRAALDLACGTAVISHLMHDVGFKVT
GLDWSDAMLAQARAKAKKRGTDIRFVSGDAENTMEPRDSYDVITNRHLVWTLVDPASAFKEWFAVLKPGGKVLIVDGNMG
RETWVKGLQKLWTKITGKPAASHMSPEMMARHQKIRSRVHFSHEMPAEAIVELLRKAGFVDIVIDRKLGDIHWAQARKMP
FLRGLERMVQERFAICARKPG

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 29625; Mature: 29625

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMNTNYSIRDEIRDFWSERAETFDQSVGHEIFSEGERKGWQRLIRKHLGAGQGRAALD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LACGTAVISHLMHDVGFKVTGLDWSDAMLAQARAKAKKRGTDIRFVSGDAENTMEPRDSY
HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCH
DVITNRHLVWTLVDPASAFKEWFAVLKPGGKVLIVDGNMGRETWVKGLQKLWTKITGKPA
HHHHCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
ASHMSPEMMARHQKIRSRVHFSHEMPAEAIVELLRKAGFVDIVIDRKLGDIHWAQARKMP
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCH
FLRGLERMVQERFAICARKPG
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSMNTNYSIRDEIRDFWSERAETFDQSVGHEIFSEGERKGWQRLIRKHLGAGQGRAALD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LACGTAVISHLMHDVGFKVTGLDWSDAMLAQARAKAKKRGTDIRFVSGDAENTMEPRDSY
HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCH
DVITNRHLVWTLVDPASAFKEWFAVLKPGGKVLIVDGNMGRETWVKGLQKLWTKITGKPA
HHHHCCEEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
ASHMSPEMMARHQKIRSRVHFSHEMPAEAIVELLRKAGFVDIVIDRKLGDIHWAQARKMP
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCH
FLRGLERMVQERFAICARKPG
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA