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The map label for this gene is rpiA [H]

Identifier: 209549606

GI number: 209549606

Start: 2072344

End: 2073042

Strand: Reverse

Name: rpiA [H]

Synonym: Rleg2_2013

Alternate gene names: 209549606

Gene position: 2073042-2072344 (Counterclockwise)

Preceding gene: 209549608

Following gene: 209549605

Centisome position: 45.68

GC content: 61.95

Gene sequence:

>699_bases
ATGGATGCCCGCGAAATGAAGATCAAGGCCGCCGCGGCCGCACTTGCCCATGTCGAAGACGGAATGCGCCTCGGCATCGG
CACCGGCAGCACCGCGGAAGAATTCGTTCGTCTGTTGGCGGAGAAAGTCGCAAGCGGCTTCAAGGTCGAAGGCGTTCCGA
CGTCTGAAAGAACGGCGCGGCTTTGCGTCGAACTCGGCGTGCCGCTTAAGTCGCTCGATGAACTGCCGGCACTCGACCTG
ACGATCGATGGCGCCGACGAGGTCGATCCGGCGCTGAGATTGATCAAGGGCGGCGGCGGCGCGTTGCTGCGCGAAAAGAT
CGTCGCGGCCGCTTCCGAGCGGATGATCGTCATTGCCGACGAGAGCAAGCTGGTCGATACGCTCGGCGCCTACGCGCTGC
CGATCGAGGTCAATCCGTTCGGGCTCGTCTCGACACGGATCGCGATCGAGAAGGTCGCGGCCCGGCTCGGCCTTGCAGGC
GAACTCAGCCTGCGCCAATCCGGTGACGGAGAGTTTACCACGGATGGCGGCCATCACATTATCGATGCATCTTTTGGCCG
CATTCCTGATGCAGAGGCGCTTTCGAGCGAGCTGAATTCCATACCCGGCGTCGTCGAACACGGGCTCTTTATCAATATGG
CGGCACTTGCAATCATTGCCGGTCCTGCGGGTGCGCGCACGCTGCAGGCAAACAGATAA

Upstream 100 bases:

>100_bases
TTGTTTCGGCTTTTCATTTTCCGTGATGATTTTGACTTTCGTTTGCCAAGCGAGCCGTGTAAACAGCACATCCAACGCAA
TAATTCGGAGCTGGCGGCGC

Downstream 100 bases:

>100_bases
CAGGAGCGTACACACATGATGAACATTGCAGGTCTTGGCCGTTTTGCCGCTGCGACCATCGTTCTTTCCGGGCTTGCCTT
CGGCTCTGCCGTCAAGGCGC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTARLCVELGVPLKSLDELPALDL
TIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAG
ELSLRQSGDGEFTTDGGHHIIDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQANR

Sequences:

>Translated_232_residues
MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTARLCVELGVPLKSLDELPALDL
TIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAG
ELSLRQSGDGEFTTDGGHHIIDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQANR
>Mature_232_residues
MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTARLCVELGVPLKSLDELPALDL
TIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAG
ELSLRQSGDGEFTTDGGHHIIDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQANR

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=212, Percent_Identity=41.9811320754717, Blast_Score=142, Evalue=3e-34,
Organism=Escherichia coli, GI1789280, Length=230, Percent_Identity=39.1304347826087, Blast_Score=137, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17551758, Length=231, Percent_Identity=38.5281385281385, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324669, Length=236, Percent_Identity=35.1694915254237, Blast_Score=108, Evalue=5e-25,
Organism=Drosophila melanogaster, GI281364072, Length=221, Percent_Identity=38.0090497737557, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF00455 DeoR; PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 24113; Mature: 24113

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTAR
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHH
LCVELGVPLKSLDELPALDLTIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD
HHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEC
ESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAGELSLRQSGDGEFTTDGGHHI
CHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCEE
IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQANR
EECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHEECCCCCCEECCCC
>Mature Secondary Structure
MDAREMKIKAAAAALAHVEDGMRLGIGTGSTAEEFVRLLAEKVASGFKVEGVPTSERTAR
CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHH
LCVELGVPLKSLDELPALDLTIDGADEVDPALRLIKGGGGALLREKIVAAASERMIVIAD
HHHHHCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEC
ESKLVDTLGAYALPIEVNPFGLVSTRIAIEKVAARLGLAGELSLRQSGDGEFTTDGGHHI
CHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCEE
IDASFGRIPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAGARTLQANR
EECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA