| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549576
Identifier: 209549576
GI number: 209549576
Start: 2034370
End: 2035740
Strand: Reverse
Name: 209549576
Synonym: Rleg2_1982
Alternate gene names: NA
Gene position: 2035740-2034370 (Counterclockwise)
Preceding gene: 209549577
Following gene: 209549575
Centisome position: 44.86
GC content: 60.1
Gene sequence:
>1371_bases ATGGAAACCAAAGCCAATTACACGATTGTCGGTTTTTTCACGGTGCTGGTGATCGCGGCGGCCTTCGGCTTCGTCTACTG GATGGCCGAATATGGCCGCGGCGGCCCGATGACCGAGCTGATCGTGCGTATTCCGGGTTCGGCCAACGGCCTCAGCGTCG GCTCGCCGGTGCGCTTCAACGGCATTCAGATCGGCTCGGTGCAGACCCTGTCGATCGATGCCGACGATCCGCAATATTCA CTGGCGTTCACCCAGGTGCGCACCGATGCGCCGATCTATCCGTCGACCAAGGCCGCTCTTGAAATCCAGGGCCTCACGGG GGCCGCCTATATCGAACTGTCGGGCGGCCGCAAGGGCGAGGAAAGCATCCTCCAGCATGCGATCGACAACGGCAAACGCG CCGTCATCGTCGCCGATCAATCGAGCGTCACCAATCTTCTGGCGACAGCCGACAAGATCCTCGATCGCGCCAACGACGCG GTCGGTGAACTTCAGGGTTTCATCGAGGATTCACGCGCGCCCCTGACCCAGACGTTCAAGAATGCCGAGACGTTCTCGGA TGCGCTTGCCAAGAATTCCGGCAATATCGACGCCTTCCTGCAGAGCGTGGGTGAGCTTTCCAATACGGTGAAGGCGGTCT CCGGTCGTGTCGATTCGACGCTTCAAGCTGTGGAATCGCTGGTCAAAGCGGTTGACGCGAAGAAGATCGACAACATCGTT TCCAACGCCGACAAGATCACCGCCAATGTCGCCGATGCCTCGGGCGACCTTAAGGGGGCGATCCAGAAGTTCGACCAGAC GGCCACCACCTTCAACGATTTCGGCAAACAGGCACAGGCGACGCTCGACCGCGTCGACACGCTTGTCGCCCAGATCGACC CCGCCAAGGTGAAGGGCTCGGTCGACGACATCGCGCAGGCGACCAAGGATGCGCGTGCCGCCGTTGCCTCGATCCGCGAC GTCGCCAATACGGTTTCGGGGCGTCAGAAAGATATCGACCAGACCATCCAGGACGTCTCGCAGCTTGCCAACAAGCTGAA TTCGGCCTCGACCCGGATCGACGGCATTCTCATCAAAGTCGATGCCTTGCTGGGAACCGACAACACGCAATCGCTGTTTA CCGAGGCGCGCGATACGCTGGAATCCTTCAAGAAGGTCGCCGACAACCTGAATGCGCGCATCGGGCCGATCGCCGACAAT CTGCAGAAATTCTCAAGCGGCGGTTTGCGCGACGTGCAGACGCTCGTCAACGACATGCGGGGAACCGTCAACAATCTGAA CGACACGATCACCAACTTCGACCGCAATCCGCAACGCCTGATCTTCGGCGGGGACACGGTCAAGCAATATGACGGCCGGA CGCGGCGTTAA
Upstream 100 bases:
>100_bases ATCCCTGGGTGCAGGCCTATTTCAAGGGTAAACGGGCGCGGGCGATCGTGCCGCAGGATGATGGCGCGCGGCACGGCGGC AGCGGGAAGTGATCGGATAA
Downstream 100 bases:
>100_bases CTGGGAAGTCAGGGGTAGCCTAATATGGTCGCATCGCATCTGTTGTCGCGCCGTTCATGGATCAGGGGAACGGTGATCGC GCTGCCGCTGACGGCGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues METKANYTIVGFFTVLVIAAAFGFVYWMAEYGRGGPMTELIVRIPGSANGLSVGSPVRFNGIQIGSVQTLSIDADDPQYS LAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKGEESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDA VGELQGFIEDSRAPLTQTFKNAETFSDALAKNSGNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVKAVDAKKIDNIV SNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKVKGSVDDIAQATKDARAAVASIRD VANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKVDALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADN LQKFSSGGLRDVQTLVNDMRGTVNNLNDTITNFDRNPQRLIFGGDTVKQYDGRTRR
Sequences:
>Translated_456_residues METKANYTIVGFFTVLVIAAAFGFVYWMAEYGRGGPMTELIVRIPGSANGLSVGSPVRFNGIQIGSVQTLSIDADDPQYS LAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKGEESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDA VGELQGFIEDSRAPLTQTFKNAETFSDALAKNSGNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVKAVDAKKIDNIV SNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKVKGSVDDIAQATKDARAAVASIRD VANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKVDALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADN LQKFSSGGLRDVQTLVNDMRGTVNNLNDTITNFDRNPQRLIFGGDTVKQYDGRTRR >Mature_456_residues METKANYTIVGFFTVLVIAAAFGFVYWMAEYGRGGPMTELIVRIPGSANGLSVGSPVRFNGIQIGSVQTLSIDADDPQYS LAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKGEESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDA VGELQGFIEDSRAPLTQTFKNAETFSDALAKNSGNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVKAVDAKKIDNIV SNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKVKGSVDDIAQATKDARAAVASIRD VANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKVDALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADN LQKFSSGGLRDVQTLVNDMRGTVNNLNDTITNFDRNPQRLIFGGDTVKQYDGRTRR
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005586 - InterPro: IPR003399 [H]
Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 48733; Mature: 48733
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKANYTIVGFFTVLVIAAAFGFVYWMAEYGRGGPMTELIVRIPGSANGLSVGSPVRFN CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCEEC GIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKGE CEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCH ESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRAPLTQTFK HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NAETFSDALAKNSGNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVKAVDAKKIDNIV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKVKGS CCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC VDDIAQATKDARAAVASIRDVANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE DALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADNLQKFSSGGLRDVQTLVNDMR EEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GTVNNLNDTITNFDRNPQRLIFGGDTVKQYDGRTRR HHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCCCCC >Mature Secondary Structure METKANYTIVGFFTVLVIAAAFGFVYWMAEYGRGGPMTELIVRIPGSANGLSVGSPVRFN CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCEEC GIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKGE CEEECCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCH ESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRAPLTQTFK HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NAETFSDALAKNSGNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVKAVDAKKIDNIV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKVKGS CCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC VDDIAQATKDARAAVASIRDVANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE DALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADNLQKFSSGGLRDVQTLVNDMR EEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GTVNNLNDTITNFDRNPQRLIFGGDTVKQYDGRTRR HHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12597275; 1551834 [H]