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The map label for this gene is 209549517

Identifier: 209549517

GI number: 209549517

Start: 1968507

End: 1969310

Strand: Reverse

Name: 209549517

Synonym: Rleg2_1923

Alternate gene names: NA

Gene position: 1969310-1968507 (Counterclockwise)

Preceding gene: 209549525

Following gene: 209549516

Centisome position: 43.4

GC content: 62.56

Gene sequence:

>804_bases
ATGGCGGCATTTCACGTCATGACGGGTTCTAGCGAAAGCTTCGCACGGCCCGTTGTCAATCGCATCGGTATCGCCGACGT
CTTCGACGCGCTGAAGCGCGGTTACGACGATTTCATGGAGAAACCGTCCCACTACGTGTTCCTGTGCCTGATGTACCCGA
TTGCCGGCGTCTTCCTGACGTTATGGACGTCGGGCGCCAACCTTCTGCCGATGGTTTTTCCGCTGATGGCAGGTTTCGTG
CTGATCGGCCCGATCGCCGCGATCGGCCTCTACGAGATCAGCCGCCGGCGCGAAGCCGGCCTCGATAGCTCCTGGACGCA
TGCGCTCGAGGTCCGCCATTCGCCGGCGCTGCCCTCGATCGTCGCAGTCGGGCTGATGCTTTGCGGCATTTTCGTCGTCT
GGCTGGTGACGGCGCAGACGCTCTACAGCAATCTGCTCGGCGAAGTGTTTCCGCGCAGCATGGCGGATTTCTTCCGCCAG
GTCTTCGGCACGCCCGAAGGCATGCAGCTGATCATCTGGGGCAATCTGATCGGCTTCGTCTTCGCGCTCGTCGTGCTGGC
GATATCCGTGATCACCTTTCCGCTGTTGCTCGACCGCGATGTCGGAGCCGTGGCCGCCGTCGTCGCCTCGATCCGCGCGA
CGATCGCCAATCCGGTGCCGGTGCTGCTCTGGGGCCTGATCGTCGCTGCACTGCTCGTCATCGGCACGATCCCGGTCTTT
GCCGGGCTTGCGCTTGTCATTCCCATCCTCGGCCATGCGACCTGGCATCTTTATCGCAAGCTGATTGCGCGGGAGCCCGC
GTAA

Upstream 100 bases:

>100_bases
TTTGCTATATTGCTCCAGTGCCGGTTGCGGATTTCGTGTCGGCTTGCCCGCCGATTGCGTGTCCGCCGCCGACCAGGTCT
CGGCTGAGGAGGAGAAAGCC

Downstream 100 bases:

>100_bases
TCGAAGGTTTCCGGGGATCGCGAACTCTCGCGATCCCCGGAGGTTAAAGCTTCGCCGATCCCCGGAACCTCGGGACCTCT
CGCCGCGTTATTCAGCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane-Like Protein; Transmembrane Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAAFHVMTGSSESFARPVVNRIGIADVFDALKRGYDDFMEKPSHYVFLCLMYPIAGVFLTLWTSGANLLPMVFPLMAGFV
LIGPIAAIGLYEISRRREAGLDSSWTHALEVRHSPALPSIVAVGLMLCGIFVVWLVTAQTLYSNLLGEVFPRSMADFFRQ
VFGTPEGMQLIIWGNLIGFVFALVVLAISVITFPLLLDRDVGAVAAVVASIRATIANPVPVLLWGLIVAALLVIGTIPVF
AGLALVIPILGHATWHLYRKLIAREPA

Sequences:

>Translated_267_residues
MAAFHVMTGSSESFARPVVNRIGIADVFDALKRGYDDFMEKPSHYVFLCLMYPIAGVFLTLWTSGANLLPMVFPLMAGFV
LIGPIAAIGLYEISRRREAGLDSSWTHALEVRHSPALPSIVAVGLMLCGIFVVWLVTAQTLYSNLLGEVFPRSMADFFRQ
VFGTPEGMQLIIWGNLIGFVFALVVLAISVITFPLLLDRDVGAVAAVVASIRATIANPVPVLLWGLIVAALLVIGTIPVF
AGLALVIPILGHATWHLYRKLIAREPA
>Mature_266_residues
AAFHVMTGSSESFARPVVNRIGIADVFDALKRGYDDFMEKPSHYVFLCLMYPIAGVFLTLWTSGANLLPMVFPLMAGFVL
IGPIAAIGLYEISRRREAGLDSSWTHALEVRHSPALPSIVAVGLMLCGIFVVWLVTAQTLYSNLLGEVFPRSMADFFRQV
FGTPEGMQLIIWGNLIGFVFALVVLAISVITFPLLLDRDVGAVAAVVASIRATIANPVPVLLWGLIVAALLVIGTIPVFA
GLALVIPILGHATWHLYRKLIAREPA

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28974; Mature: 28843

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFHVMTGSSESFARPVVNRIGIADVFDALKRGYDDFMEKPSHYVFLCLMYPIAGVFLT
CCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHH
LWTSGANLLPMVFPLMAGFVLIGPIAAIGLYEISRRREAGLDSSWTHALEVRHSPALPSI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHH
VAVGLMLCGIFVVWLVTAQTLYSNLLGEVFPRSMADFFRQVFGTPEGMQLIIWGNLIGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
FALVVLAISVITFPLLLDRDVGAVAAVVASIRATIANPVPVLLWGLIVAALLVIGTIPVF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGLALVIPILGHATWHLYRKLIAREPA
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAFHVMTGSSESFARPVVNRIGIADVFDALKRGYDDFMEKPSHYVFLCLMYPIAGVFLT
CEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHH
LWTSGANLLPMVFPLMAGFVLIGPIAAIGLYEISRRREAGLDSSWTHALEVRHSPALPSI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHH
VAVGLMLCGIFVVWLVTAQTLYSNLLGEVFPRSMADFFRQVFGTPEGMQLIIWGNLIGFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
FALVVLAISVITFPLLLDRDVGAVAAVVASIRATIANPVPVLLWGLIVAALLVIGTIPVF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGLALVIPILGHATWHLYRKLIAREPA
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA