Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 209549494

GI number: 209549494

Start: 1943546

End: 1945015

Strand: Reverse

Name: sufB [C]

Synonym: Rleg2_1900

Alternate gene names: 209549494

Gene position: 1945015-1943546 (Counterclockwise)

Preceding gene: 209549495

Following gene: 209549493

Centisome position: 42.86

GC content: 60.27

Gene sequence:

>1470_bases
ATGGCTGCCGTGCAGGAAACGATCGACCAGGTCCGCCTGATCGATGTCGACCAGTACAAATACGGTTTCGAGACCGTCAT
CGAAATGGACAAGGCGCCTAAAGGCCTGTCCGAGGACATCATCCGCTTCATTTCGGCCAAGAAGCAGGAGCCGGAATGGA
TGCTGGAATGGCGCCTCGAGGCCTATCGCCGCTGGCTGACGCTGGAAGAGCCGACCTGGGCGCGGGTCGACTATCCGAAG
ATCGATTTCAACGACATCTATTATTACGCCGCGCCGAAGAGCACGCCGGGTCCGAAGTCGCTCGACGAGGTCGATCCGGA
GCTGCTCAAGGTCTATGAGAAGCTCGGCATCCCGCTGCGTGAGCAGGAGATCCTGGCCGGCGTCGACAAGCCGAAGATTG
CCGTCGACGCCGTCTTCGACAGCGTCTCAGTCGTCACCACCTTCAAGGCCGAGCTGAAGAAGGCCGGCGTGATCTTCATG
TCGATCTCGGAAGCGATCCGCGAATATCCCGATCTCGTCCGGAAATATCTCGGCTCGGTCGTGCCGACCTCGGACAATTA
TTACGCGACGCTGAATTCGGCAGTCTTCACCGACGGTTCCTTCGTCTTCGTGCCGAAGGGCGTTCGCTGCCCGATGGAGC
TTTCCACCTATTTCCGCATCAACGAGAAGGGCACCGGCCAGTTCGAGCGCACGCTGATCATCGCGGAAGAGGGGGCTTAC
GTCTCCTATCTCGAAGGCTGCACGGCGCCGCAGCGCGACGAAAACCAGCTGCATGCCGCCGTGGTCGAGCTCGTTGCGCT
CGACGATGCCGAGATCAAATATTCCACCGTCCAGAACTGGTATCCTGGTGACAAGGAAGGCAAGGGCGGTATCTACAACT
TCGTCACCAAGCGCGGTGATTGCCGCGGCGACCGGTCGAAGATCTCGTGGACGCAGGTCGAAACCGGCTCGGCGATCACC
TGGAAATATCCGTCCTGCATTCTGCGCGGCGACGACAGCCGCGGCGAGTTCTATTCGATCGCCGTCTCCAACGGCCATCA
GCAGATCGACAGCGGCACCAAGATGATCCATCTCGGCAAGAACACGTCGAGCCGCATCGTCTCCAAGGGCATCGCCGCCG
GCGTTTCCAACAACACCTATCGCGGCCAGGTCTCGGCCCACCGCAAGGCTTCGAACGCGCGCAACTTCACCCAATGCGAC
TCGCTGTTGATCGGCGACAAGTGCGGCGCCCATACCGTGCCCTACATCGAGGCGAAGAACTCGACGGCGCAGTTCGAGCA
TGAAGCGACGACCTCGAAGATCTCCGAGGACCAGCTGTTCTACTGCCTGCAGCGCGGTATCCCGACAGAAGCGGCGATCG
CGCTCATCGTCAACGGCTTCGTCAAGGAAGTGCTGCAGGAACTGCCGATGGAATTCGCGGTCGAGGCGCAGAAGCTGATC
AGCATTTCGCTTGAGGGCTCGGTAGGCTGA

Upstream 100 bases:

>100_bases
CCGATATCAAGGGCAAGGAATTGCCCGACATCAGGGGCAAGAGAATTGTCCATGCGCTACAAGCTGCCGGACCTTGGATC
CGGCGAGATTGGAGAATGAA

Downstream 100 bases:

>100_bases
CATGAGCGAGGCGGACAAGAAGCGTATTCTTGAACGTCTGGAGAATATGCGCGGGGAGATATTGGCGAAAATTCGCCCCC
GCGAGCAAAGAAACGAGACG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLEAYRRWLTLEEPTWARVDYPK
IDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLREQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFM
SISEAIREYPDLVRKYLGSVVPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY
VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAIT
WKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCD
SLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI
SISLEGSVG

Sequences:

>Translated_489_residues
MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLEAYRRWLTLEEPTWARVDYPK
IDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLREQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFM
SISEAIREYPDLVRKYLGSVVPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY
VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAIT
WKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCD
SLLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI
SISLEGSVG
>Mature_488_residues
AAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLEAYRRWLTLEEPTWARVDYPKI
DFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLREQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMS
ISEAIREYPDLVRKYLGSVVPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAYV
SYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITW
KYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGKNTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDS
LLIGDKCGAHTVPYIEAKNSTAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLIS
ISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=485, Percent_Identity=60.8247422680412, Blast_Score=626, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54624; Mature: 54493

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE
CCHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR
HHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPDLVRKYLGSV
HHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCC
VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY
CCCCCCEEEEECCEEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCE
VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGD
EEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHCCCC
CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK
CCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEEEEECC
NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN
CCHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCHHHHHCEEECCCCCCCCCCEEEECC
STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI
CCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHEE
SISLEGSVG
EEEECCCCC
>Mature Secondary Structure 
AAVQETIDQVRLIDVDQYKYGFETVIEMDKAPKGLSEDIIRFISAKKQEPEWMLEWRLE
CHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
AYRRWLTLEEPTWARVDYPKIDFNDIYYYAAPKSTPGPKSLDEVDPELLKVYEKLGIPLR
HHHHHEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQEILAGVDKPKIAVDAVFDSVSVVTTFKAELKKAGVIFMSISEAIREYPDLVRKYLGSV
HHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCC
VPTSDNYYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRINEKGTGQFERTLIIAEEGAY
CCCCCCEEEEECCEEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCE
VSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDKEGKGGIYNFVTKRGD
EEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHCCCC
CRGDRSKISWTQVETGSAITWKYPSCILRGDDSRGEFYSIAVSNGHQQIDSGTKMIHLGK
CCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEEEEECC
NTSSRIVSKGIAAGVSNNTYRGQVSAHRKASNARNFTQCDSLLIGDKCGAHTVPYIEAKN
CCHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCHHHHHCEEECCCCCCCCCCEEEECC
STAQFEHEATTSKISEDQLFYCLQRGIPTEAAIALIVNGFVKEVLQELPMEFAVEAQKLI
CCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHEE
SISLEGSVG
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]