| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is tgt [H]
Identifier: 209549348
GI number: 209549348
Start: 1793075
End: 1794205
Strand: Direct
Name: tgt [H]
Synonym: Rleg2_1752
Alternate gene names: 209549348
Gene position: 1793075-1794205 (Clockwise)
Preceding gene: 209549347
Following gene: 209549359
Centisome position: 39.51
GC content: 64.01
Gene sequence:
>1131_bases ATGACAGAGAACTTCCAATTCACGTTGAAGAAGACCGATGCCGGCGCGCGCCTCGGCGAAATCTCCATGCCGCGCGGCAC GATCCGCACGCCGGCCTTCATGCCTGTGGGGACCGTCGGCACGGTCAAGGCGATGTATCTCGACCAGGTGCGCGAAACCG GCGCCGACATCATCCTCGGCAATACCTATCACCTGATGCTGCGCCCCAGCGCCGAGCGCGTCGCCCGCCTCGGTGGCCTG CACAAGCTGATCCGCTGGGAGCACCCGATCCTGACGGATTCCGGCGGCTTCCAGGTCATGTCGCTCTCCGGTCTGCGCAA GCTCGACGAGCAGGGCGTCACCTTCAAGTCGCATGTCGACGGCAGCCTGCACCATATGTCGCCGGAGCGTTCCATCGAAA TCCAGGGCCTTCTCGGCTCCGACATCCAGATGCAGCTCGACGAATGCGTGGCACTGCCGGCTGAGCCGCGGGAGATTGAG CGCGCCATGGAAATGTCGCTGCGTTGGGCCGAGCGCTGCCGGGTCGCCTTCGGCGAGCAGCCTGGCAAGGCGATGTTCGG CATCGTCCAGGGAGGCGATATTCCCGCTTTGCGCGTTCGTTCGGCGCAGGCGCTGAGCGAGCTCGACCTCAAGGGTTATG CCATCGGCGGCCTTGCCGTCGGCGAGCCGCAGGATGTCATGCTGCAGATGCTGGACACGACACTGCCGGTGCTCCCCGGG GAAAAGCCGCGTTACCTCATGGGCGTCGGCACGCCGGATGATATCCTGAAATCGGTTGCCCGCGGCATCGACATGTTCGA CTGCGTCATGCCGACCCGTTCCGGCCGCCACGGCCTGGCCTTTACCCGCCGCGGCAAGGTCAATATCCGCAATGCCCGTC ATGCCGAGGATATGCGCCCGCTCGACGATCAGTCGAACTGCCCGGCCTCGCGCGATTATTCACGCGCCTATCTGCACCAT CTCGTCCGCTCCAACGAAGCACTCGGCGGCATGTTGCTCTCCTGGAACAATCTCGCCTATTACCAGGAACTGATGCAGGG CATCCGCAAGGCGATCGCCGAAGGCCGCTTCGCCGATTTCATGGCGGAGACGATGGAGGAATGGGCAAGAGGCGATCTCG ACCCGGTCTAA
Upstream 100 bases:
>100_bases CAGGCTTCGAAACCATGCACGCGGCCTATAAACACGCCATTTCGACAGGCTACCGCTTCTACTCCTACGGCGACGCGAGC CTTCTTTTCCGGAAAGACAA
Downstream 100 bases:
>100_bases GGCTAGCTCGCTCCAGCGCGGCTCTCCGCGGGAAGCTCAGATGCTGGTCTTGGCGCAATCATTGTTTTGAGCTTTTTGCG CACCGGCTCGTCGAAGTGAA
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTENFQFTLKKTDAGARLGEISMPRGTIRTPAFMPVGTVGTVKAMYLDQVRETGADIILGNTYHLMLRPSAERVARLGGL HKLIRWEHPILTDSGGFQVMSLSGLRKLDEQGVTFKSHVDGSLHHMSPERSIEIQGLLGSDIQMQLDECVALPAEPREIE RAMEMSLRWAERCRVAFGEQPGKAMFGIVQGGDIPALRVRSAQALSELDLKGYAIGGLAVGEPQDVMLQMLDTTLPVLPG EKPRYLMGVGTPDDILKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDMRPLDDQSNCPASRDYSRAYLHH LVRSNEALGGMLLSWNNLAYYQELMQGIRKAIAEGRFADFMAETMEEWARGDLDPV
Sequences:
>Translated_376_residues MTENFQFTLKKTDAGARLGEISMPRGTIRTPAFMPVGTVGTVKAMYLDQVRETGADIILGNTYHLMLRPSAERVARLGGL HKLIRWEHPILTDSGGFQVMSLSGLRKLDEQGVTFKSHVDGSLHHMSPERSIEIQGLLGSDIQMQLDECVALPAEPREIE RAMEMSLRWAERCRVAFGEQPGKAMFGIVQGGDIPALRVRSAQALSELDLKGYAIGGLAVGEPQDVMLQMLDTTLPVLPG EKPRYLMGVGTPDDILKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDMRPLDDQSNCPASRDYSRAYLHH LVRSNEALGGMLLSWNNLAYYQELMQGIRKAIAEGRFADFMAETMEEWARGDLDPV >Mature_375_residues TENFQFTLKKTDAGARLGEISMPRGTIRTPAFMPVGTVGTVKAMYLDQVRETGADIILGNTYHLMLRPSAERVARLGGLH KLIRWEHPILTDSGGFQVMSLSGLRKLDEQGVTFKSHVDGSLHHMSPERSIEIQGLLGSDIQMQLDECVALPAEPREIER AMEMSLRWAERCRVAFGEQPGKAMFGIVQGGDIPALRVRSAQALSELDLKGYAIGGLAVGEPQDVMLQMLDTTLPVLPGE KPRYLMGVGTPDDILKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDMRPLDDQSNCPASRDYSRAYLHHL VRSNEALGGMLLSWNNLAYYQELMQGIRKAIAEGRFADFMAETMEEWARGDLDPV
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=350, Percent_Identity=43.1428571428571, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI13375872, Length=267, Percent_Identity=23.9700374531835, Blast_Score=102, Evalue=5e-22, Organism=Escherichia coli, GI1786607, Length=366, Percent_Identity=51.6393442622951, Blast_Score=374, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17544680, Length=354, Percent_Identity=41.5254237288136, Blast_Score=279, Evalue=1e-75, Organism=Caenorhabditis elegans, GI25146502, Length=135, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI19920510, Length=383, Percent_Identity=43.8642297650131, Blast_Score=318, Evalue=4e-87, Organism=Drosophila melanogaster, GI21355311, Length=247, Percent_Identity=24.6963562753036, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 41738; Mature: 41607
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENFQFTLKKTDAGARLGEISMPRGTIRTPAFMPVGTVGTVKAMYLDQVRETGADIILG CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC NTYHLMLRPSAERVARLGGLHKLIRWEHPILTDSGGFQVMSLSGLRKLDEQGVTFKSHVD CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEEECCCC GSLHHMSPERSIEIQGLLGSDIQMQLDECVALPAEPREIERAMEMSLRWAERCRVAFGEQ CCHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PGKAMFGIVQGGDIPALRVRSAQALSELDLKGYAIGGLAVGEPQDVMLQMLDTTLPVLPG CCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEECCEECCCHHHHHHHHHHHHCCCCCC EKPRYLMGVGTPDDILKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDMRP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCEEECCCCCHHHCCC LDDQSNCPASRDYSRAYLHHLVRSNEALGGMLLSWNNLAYYQELMQGIRKAIAEGRFADF CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHH MAETMEEWARGDLDPV HHHHHHHHHCCCCCCC >Mature Secondary Structure TENFQFTLKKTDAGARLGEISMPRGTIRTPAFMPVGTVGTVKAMYLDQVRETGADIILG CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC NTYHLMLRPSAERVARLGGLHKLIRWEHPILTDSGGFQVMSLSGLRKLDEQGVTFKSHVD CEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEHHHHHHHHHCCCEEECCCC GSLHHMSPERSIEIQGLLGSDIQMQLDECVALPAEPREIERAMEMSLRWAERCRVAFGEQ CCHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PGKAMFGIVQGGDIPALRVRSAQALSELDLKGYAIGGLAVGEPQDVMLQMLDTTLPVLPG CCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEECCEECCCHHHHHHHHHHHHCCCCCC EKPRYLMGVGTPDDILKSVARGIDMFDCVMPTRSGRHGLAFTRRGKVNIRNARHAEDMRP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCCEEECCCCCHHHCCC LDDQSNCPASRDYSRAYLHHLVRSNEALGGMLLSWNNLAYYQELMQGIRKAIAEGRFADF CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHHH MAETMEEWARGDLDPV HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]