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The map label for this gene is ssb [H]

Identifier: 209549338

GI number: 209549338

Start: 1784809

End: 1785315

Strand: Direct

Name: ssb [H]

Synonym: Rleg2_1742

Alternate gene names: 209549338

Gene position: 1784809-1785315 (Clockwise)

Preceding gene: 209549334

Following gene: 209549340

Centisome position: 39.33

GC content: 62.72

Gene sequence:

>507_bases
ATGGCTGGTAGCGTAAACAAGGTAATTCTGATTGGAAACGTCGGTGCAGACCCGGAAATCCGCCGCACGCAGGATGGCCG
GCCGATCGCCAATCTCCGCATCGCGACCTCGGAGACCTGGCGCGACCGCAATTCCGGCGAGCGCCGTGAAAAGACCGAAT
GGCACACCGTCGTCGTTTTCAACGAGGGCCTGTGCAAGGTTGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAGTTGCAGACCCGCAAATGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CGGTTCGACCCTGACCATGCTCGATGGCCGCGGTGAAGGCGGCGGTGCAAGCTCCGGCGGCGGCCGAGGCAGCAGCAACA
ATGATTATGGCGATGACTACGGCGCCCCGGCTCCTTCTTCCTCGCCGAGCCGCGGCGGTGGCGGCGGCAACTTCTCGCGC
GATCTCGACGACGACATCCCGTTCTGA

Upstream 100 bases:

>100_bases
ATGTGGATTAAATGCCGCCCATGCGCATCGGCGGTCCGTGATGGTTTAAGGTGCGCCGATTGAAACGCCGCCGGGCAGGG
CGGCAGGCAGGGTGAGAAGC

Downstream 100 bases:

>100_bases
TCGACCGCTTTTCCTGGATCTATAGACTATCCGAGAGCATGATGCCTTTGATGGCGTCATGCTCTTTTTCTTTGGTTTCG
CACCAATCAGTGCGGCGTCG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGSVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFGSTLTMLDGRGEGGGASSGGGRGSSNNDYGDDYGAPAPSSSPSRGGGGGNFSR
DLDDDIPF

Sequences:

>Translated_168_residues
MAGSVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFGSTLTMLDGRGEGGGASSGGGRGSSNNDYGDDYGAPAPSSSPSRGGGGGNFSR
DLDDDIPF
>Mature_167_residues
AGSVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYIE
GQLQTRKWQDQQGQDRYSTEVVLQGFGSTLTMLDGRGEGGGASSGGGRGSSNNDYGDDYGAPAPSSSPSRGGGGGNFSRD
LDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=36.1111111111111, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1790494, Length=191, Percent_Identity=44.5026178010471, Blast_Score=144, Evalue=3e-36,
Organism=Drosophila melanogaster, GI85725234, Length=100, Percent_Identity=36, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24647376, Length=100, Percent_Identity=36, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18143; Mature: 18012

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVF
CCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
NEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQQGQDRYSTEVVLQGFGSTLTMLDGRGEG
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GGASSGGGRGSSNNDYGDDYGAPAPSSSPSRGGGGGNFSRDLDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVF
CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
NEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQQGQDRYSTEVVLQGFGSTLTMLDGRGEG
CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GGASSGGGRGSSNNDYGDDYGAPAPSSSPSRGGGGGNFSRDLDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 10503543 [H]