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The map label for this gene is ytfQ [H]

Identifier: 209549316

GI number: 209549316

Start: 1755875

End: 1756837

Strand: Direct

Name: ytfQ [H]

Synonym: Rleg2_1720

Alternate gene names: 209549316

Gene position: 1755875-1756837 (Clockwise)

Preceding gene: 209549315

Following gene: 209549317

Centisome position: 38.69

GC content: 58.57

Gene sequence:

>963_bases
ATGAAATTGAAGACTGCACTTTTGAGTGCCACGATTCTTGCTGCCTGCATGTTCGGTTCGGCTTCGGCCGCCGGATTGAC
CGTCGGCTTCTCGCAGATCGGCTCGGAATCGGGCTGGCGCGCGGCTGAAACGACTGTAACCAAGGAACAGGCCAAGAAGC
GCGGCATCGATCTGAAGTTTGCCGATGCACAGCAGAAGCAGGAAAATCAGATCAAGGCTCTGCGCTCCTTTATTGCTCAG
GGCGTCGATGCCATTCTCATTGCTCCGGTCGTCGAAACCGGCTGGGACGACGTTCTGAAAGAAGCCAAGGAAGCCAAGAT
TCCGGTCATCCTTCTCGACCGCACCATCAAGGCTCCTGATGATCTCTACCTGACGGCTGTCACCTCGGACCTCGTCCACG
AAGGCAAGGTCGCCGGTGACTTCCTGGTCAAGACCGTCGGCGACAAGAAGTGCAACGTCGTCGAGCTGCAGGGCACGACC
GGTTCGTCGCCGGCCATCGCCCGCAAGAAGGGCTTCGAAGAAGCTCTCGCCGGCCACGACAACCTCAAGATCGTTCGCAG
CCAGACCGGTGACTTCACCCGCACCAAGGGCAAGGAAGTCATGGAAAGCTTCCTGAAGGCCGAGAATGGCGGCAAGGATA
TCTGCGCTCTCTACGCCCATAATGACGATATGGCCGTCGGCGCCATCCAGGCGATCAAGGAAGCCGGCCTGAAGCCCGGC
AAGGATATCCTCGTCGTCTCGATCGACGCCGTTCCGGATATCTTCAAGGCTATGTCCGAAGGCGAGTCCAATGCCACGGT
CGAGCTGACGCCTAACATGGCAGGTCCGGCCTTCGATGCGCTCGACGCCTACCTGAAGGACAAGAAGGCTCCGCCGAAGT
GGATCCAGACCGAATCCAAGCTCTATACGCCTGCCGACGAGCCGATGAAGGTCTACGAAGAGAAGAAGGGTCAGGGCTAC
TGA

Upstream 100 bases:

>100_bases
CTCTTTTTTTGCTGCGCTGCATGCAAAGATTCCGATTTACAAAAGTAATACTATATGATTTTTTGACCCTGCGCCGCGAG
ACGCGGCTTGGGAGGAAATC

Downstream 100 bases:

>100_bases
TCTGATTTGACGTCGCTGCATAATCCCTCAATCGGGAGCGATTGAGGGTAGAATGATGCAGCATTCAAGCGCTGTAGAAC
CGCACCGGCCCATCATGGAC

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKLKTALLSATILAACMFGSASAAGLTVGFSQIGSESGWRAAETTVTKEQAKKRGIDLKFADAQQKQENQIKALRSFIAQ
GVDAILIAPVVETGWDDVLKEAKEAKIPVILLDRTIKAPDDLYLTAVTSDLVHEGKVAGDFLVKTVGDKKCNVVELQGTT
GSSPAIARKKGFEEALAGHDNLKIVRSQTGDFTRTKGKEVMESFLKAENGGKDICALYAHNDDMAVGAIQAIKEAGLKPG
KDILVVSIDAVPDIFKAMSEGESNATVELTPNMAGPAFDALDAYLKDKKAPPKWIQTESKLYTPADEPMKVYEEKKGQGY

Sequences:

>Translated_320_residues
MKLKTALLSATILAACMFGSASAAGLTVGFSQIGSESGWRAAETTVTKEQAKKRGIDLKFADAQQKQENQIKALRSFIAQ
GVDAILIAPVVETGWDDVLKEAKEAKIPVILLDRTIKAPDDLYLTAVTSDLVHEGKVAGDFLVKTVGDKKCNVVELQGTT
GSSPAIARKKGFEEALAGHDNLKIVRSQTGDFTRTKGKEVMESFLKAENGGKDICALYAHNDDMAVGAIQAIKEAGLKPG
KDILVVSIDAVPDIFKAMSEGESNATVELTPNMAGPAFDALDAYLKDKKAPPKWIQTESKLYTPADEPMKVYEEKKGQGY
>Mature_320_residues
MKLKTALLSATILAACMFGSASAAGLTVGFSQIGSESGWRAAETTVTKEQAKKRGIDLKFADAQQKQENQIKALRSFIAQ
GVDAILIAPVVETGWDDVLKEAKEAKIPVILLDRTIKAPDDLYLTAVTSDLVHEGKVAGDFLVKTVGDKKCNVVELQGTT
GSSPAIARKKGFEEALAGHDNLKIVRSQTGDFTRTKGKEVMESFLKAENGGKDICALYAHNDDMAVGAIQAIKEAGLKPG
KDILVVSIDAVPDIFKAMSEGESNATVELTPNMAGPAFDALDAYLKDKKAPPKWIQTESKLYTPADEPMKVYEEKKGQGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=296, Percent_Identity=69.9324324324324, Blast_Score=414, Evalue=1e-117,
Organism=Escherichia coli, GI1790192, Length=295, Percent_Identity=32.5423728813559, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1790526, Length=145, Percent_Identity=34.4827586206897, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788898, Length=316, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789068, Length=206, Percent_Identity=26.2135922330097, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34322; Mature: 34322

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTALLSATILAACMFGSASAAGLTVGFSQIGSESGWRAAETTVTKEQAKKRGIDLKF
CCHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE
ADAQQKQENQIKALRSFIAQGVDAILIAPVVETGWDDVLKEAKEAKIPVILLDRTIKAPD
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCC
DLYLTAVTSDLVHEGKVAGDFLVKTVGDKKCNVVELQGTTGSSPAIARKKGFEEALAGHD
CEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCHHHHHCCCC
NLKIVRSQTGDFTRTKGKEVMESFLKAENGGKDICALYAHNDDMAVGAIQAIKEAGLKPG
CEEEEECCCCCCHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
KDILVVSIDAVPDIFKAMSEGESNATVELTPNMAGPAFDALDAYLKDKKAPPKWIQTESK
CEEEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCC
LYTPADEPMKVYEEKKGQGY
CCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKTALLSATILAACMFGSASAAGLTVGFSQIGSESGWRAAETTVTKEQAKKRGIDLKF
CCHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEE
ADAQQKQENQIKALRSFIAQGVDAILIAPVVETGWDDVLKEAKEAKIPVILLDRTIKAPD
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCC
DLYLTAVTSDLVHEGKVAGDFLVKTVGDKKCNVVELQGTTGSSPAIARKKGFEEALAGHD
CEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCHHHHHCCCC
NLKIVRSQTGDFTRTKGKEVMESFLKAENGGKDICALYAHNDDMAVGAIQAIKEAGLKPG
CEEEEECCCCCCHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
KDILVVSIDAVPDIFKAMSEGESNATVELTPNMAGPAFDALDAYLKDKKAPPKWIQTESK
CEEEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCC
LYTPADEPMKVYEEKKGQGY
CCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]