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The map label for this gene is ugpA [C]

Identifier: 209549297

GI number: 209549297

Start: 1732791

End: 1733828

Strand: Direct

Name: ugpA [C]

Synonym: Rleg2_1700

Alternate gene names: 209549297

Gene position: 1732791-1733828 (Clockwise)

Preceding gene: 209549296

Following gene: 209549298

Centisome position: 38.18

GC content: 62.72

Gene sequence:

>1038_bases
ATGACGGGAAAGACGGTTTCTTCCGAACCGCCGGCGAAAGCCGGCCTGCGGCAGGCGCTCAACGCGCCTGTCCGGCTCTT
CATGGGCATCGTCGATATTCCCATGCGCGCCTGGCAGAAGCTGACGGGGCTGAACGGCATGGCGGGCGTCTTCCTGGCGC
CCAACATGCTGATCTTCACGGTTTTCGTGCTCCTGCCGCTGGTCATCAACTTCATCTATTCGACGACGAGCGGCGGCGCC
ATCTTCCTGCCGAACAGGACCTATGTCGGCGCCGAGCAGTACCGCATCCTGTTCGATTGCGGTTCTTATCTCGACCCCTC
GACCTGCGCGGCCGACACTTTCTGGGCGGCCGTGCGCAACACCGCCGTCTTCGTCGTCTTCCAGGTCTCGGCGATGCTGG
TCGCAGCGCTGGCGACGGCCTTGATCCTCAACCGCGAGCTTTCCAATCGCGGCTTCTGGCGCGCCGTCTTCTTCTTCCCG
GTGCTTCTGTCGCCCGTTGTCGTCGGCCTGATCTGGAAATGGATCCTGCAGCGCCAGGGCCTGTTGAACTACGCGCTGAG
TCCCTTCGGCTTCGAACCTTTCTCCTGGCTCAGCGATCGTTTCTGGGCCTTCTTCTTCGCCGTCTTCGTCTCGGTCTGGG
CGCATATGGGCTTTTATGCCCTGATCCTGCTCGCCGGCCTGCAGGCGATCCCGAGGGATCTCTACGAGGCGGCCGCGATG
GACAAGGCGAGCCCCACCCGCATCTTCCGGCGCATCACCCTGCCGCTGCTGATGCCGAACCTTATCGTCGTCCTGGTGCT
GGCGCTGATCCGCGCCGTGCAGATCTTCGACGAGGTCTTCGTCTTGACCGGCGGCGGCCCTGGCACCAGCACCATGTATA
TCACCCAGTATATTTACGAGACCGGCTTTGCCAGTTCGCTGCGCAATCCGGGGCTTGCCTCGGCCGCCTCGATCCTGATG
GGCATCGTACTGGTCATCCTGACGCTGATCCAGCTCGGCGTCAGCAGCCGCAACGAGAAGAAGGGAACACGCCAATGA

Upstream 100 bases:

>100_bases
TCAGCCAGGTGATCGCCGGCGAGATGAAGCTCGACGACGCCTATGCCCGCATCGACGAGGACATCAAGGCCAAGGTCGGC
GCCAACTAACGGACCTAGAG

Downstream 100 bases:

>100_bases
GCGCGGTCGGCGCCTTTCTCCTGCGCCGCCGCGGCCGCGGCTGGCACTGGACCGACGTGGTCACCTGGATCTGGCTGGTC
TCGGGCGTCTTCCTGATGTT

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTGKTVSSEPPAKAGLRQALNAPVRLFMGIVDIPMRAWQKLTGLNGMAGVFLAPNMLIFTVFVLLPLVINFIYSTTSGGA
IFLPNRTYVGAEQYRILFDCGSYLDPSTCAADTFWAAVRNTAVFVVFQVSAMLVAALATALILNRELSNRGFWRAVFFFP
VLLSPVVVGLIWKWILQRQGLLNYALSPFGFEPFSWLSDRFWAFFFAVFVSVWAHMGFYALILLAGLQAIPRDLYEAAAM
DKASPTRIFRRITLPLLMPNLIVVLVLALIRAVQIFDEVFVLTGGGPGTSTMYITQYIYETGFASSLRNPGLASAASILM
GIVLVILTLIQLGVSSRNEKKGTRQ

Sequences:

>Translated_345_residues
MTGKTVSSEPPAKAGLRQALNAPVRLFMGIVDIPMRAWQKLTGLNGMAGVFLAPNMLIFTVFVLLPLVINFIYSTTSGGA
IFLPNRTYVGAEQYRILFDCGSYLDPSTCAADTFWAAVRNTAVFVVFQVSAMLVAALATALILNRELSNRGFWRAVFFFP
VLLSPVVVGLIWKWILQRQGLLNYALSPFGFEPFSWLSDRFWAFFFAVFVSVWAHMGFYALILLAGLQAIPRDLYEAAAM
DKASPTRIFRRITLPLLMPNLIVVLVLALIRAVQIFDEVFVLTGGGPGTSTMYITQYIYETGFASSLRNPGLASAASILM
GIVLVILTLIQLGVSSRNEKKGTRQ
>Mature_344_residues
TGKTVSSEPPAKAGLRQALNAPVRLFMGIVDIPMRAWQKLTGLNGMAGVFLAPNMLIFTVFVLLPLVINFIYSTTSGGAI
FLPNRTYVGAEQYRILFDCGSYLDPSTCAADTFWAAVRNTAVFVVFQVSAMLVAALATALILNRELSNRGFWRAVFFFPV
LLSPVVVGLIWKWILQRQGLLNYALSPFGFEPFSWLSDRFWAFFFAVFVSVWAHMGFYALILLAGLQAIPRDLYEAAAMD
KASPTRIFRRITLPLLMPNLIVVLVLALIRAVQIFDEVFVLTGGGPGTSTMYITQYIYETGFASSLRNPGLASAASILMG
IVLVILTLIQLGVSSRNEKKGTRQ

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=297, Percent_Identity=30.976430976431, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787570, Length=266, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790465, Length=224, Percent_Identity=29.4642857142857, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38034; Mature: 37902

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKTVSSEPPAKAGLRQALNAPVRLFMGIVDIPMRAWQKLTGLNGMAGVFLAPNMLIFT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VFVLLPLVINFIYSTTSGGAIFLPNRTYVGAEQYRILFDCGSYLDPSTCAADTFWAAVRN
HHHHHHHHHHHHHHCCCCCEEECCCCCEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHH
TAVFVVFQVSAMLVAALATALILNRELSNRGFWRAVFFFPVLLSPVVVGLIWKWILQRQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LLNYALSPFGFEPFSWLSDRFWAFFFAVFVSVWAHMGFYALILLAGLQAIPRDLYEAAAM
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DKASPTRIFRRITLPLLMPNLIVVLVLALIRAVQIFDEVFVLTGGGPGTSTMYITQYIYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
TGFASSLRNPGLASAASILMGIVLVILTLIQLGVSSRNEKKGTRQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TGKTVSSEPPAKAGLRQALNAPVRLFMGIVDIPMRAWQKLTGLNGMAGVFLAPNMLIFT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VFVLLPLVINFIYSTTSGGAIFLPNRTYVGAEQYRILFDCGSYLDPSTCAADTFWAAVRN
HHHHHHHHHHHHHHCCCCCEEECCCCCEECHHHHEEEEECCCCCCCCHHHHHHHHHHHHH
TAVFVVFQVSAMLVAALATALILNRELSNRGFWRAVFFFPVLLSPVVVGLIWKWILQRQG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LLNYALSPFGFEPFSWLSDRFWAFFFAVFVSVWAHMGFYALILLAGLQAIPRDLYEAAAM
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DKASPTRIFRRITLPLLMPNLIVVLVLALIRAVQIFDEVFVLTGGGPGTSTMYITQYIYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
TGFASSLRNPGLASAASILMGIVLVILTLIQLGVSSRNEKKGTRQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]