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The map label for this gene is dppB [H]

Identifier: 209549290

GI number: 209549290

Start: 1723853

End: 1724881

Strand: Direct

Name: dppB [H]

Synonym: Rleg2_1693

Alternate gene names: 209549290

Gene position: 1723853-1724881 (Clockwise)

Preceding gene: 209549289

Following gene: 209549291

Centisome position: 37.99

GC content: 61.22

Gene sequence:

>1029_bases
ATGAAGGAACTCTCCGTAGCCGAATTTGGCCGACGCCTGGCGCATTTGCTGGTCAGCCTGTTCATTCTCCTCTGTGTGAC
CTTCGTGATCGGCCGCGTCTTGCCCACCGATCCGGTCGGCGCGATCGTCGGCGAACTCGCCGATCCCGCCGCCTATGCGG
CGATGCGGGCCCGCCTCGGCCTCGATCTGCCGATCTACCAGCAGTTTTTTCTCTATCTGAATGGGCTGGCGCATGGTGAC
TTCGGCACCGCCGTCCTCACCGGCAATCCCGTCTCGTCGGACCTTGCGCAGGCGTTTCCGGCGACATTCGAGCTGGCGAC
GCTGGCGGTGATCATTTCGACATTCGTCGGCGTGCCGCTTGGCCTGGTCGCGGCCTTGTTTCGCGATAGCTTCATCGACA
AGATAGCCCGGGTGGTGGCGCTGGTCGGGCATTCGATCCCGGTCTTCTGGTTCGGCATCGTCGGGCTCGTCATCTTCTAT
GCCGGCCTCAACTGGGTCGGCGGGCCGGGCAGGATCGATGTGTTTTATGAAGGCCTCGTCGAGCCCAGGACCGGCCTGTT
GCTGATCGACAGCCTGTTGCAGGGCGAGACGGAAATCTTCTGGAATGCGCTCGGTCATATCATTCTGCCCGCCATCATCC
TGGCCTATGCGGCGATGGCCTATATCACCCGCATGACACGCAGCTTCACTCTGGAGCAATTGAGCCAGGACTATGTCATC
GCGGCACGTGCCAAGGGTGTGAGCCCCTTCGGCACGATCTGGCACCACGTCCTGCCGAACATTGCCGTGCAGCTGATCAC
CATCCTGGCCATTTCCTATGGCGGGCTGCTCGAAGGCGCTGTCGTCACCGAGATCGTTTTCTCCTGGCCGGGCATCGGCC
AATACATGACGAACGCCCTCATGATCGGCGACATGAACGCCATCGTGGCTGGCACCATCATCGTGGGATTCATCTTCATG
CTGTTAAACTTCCTCGCCGACGTCGCTTACGCCGTCTTCGATCCGCGTATGCGGGAGGCGGCCCGATGA

Upstream 100 bases:

>100_bases
CCGGCAGGGTCCAGGGATATGTCGGACATCCGTCGCAAATGACGCGTCTCGAGAACGTGACCAAGGTCGAAACCCAGTAA
GACTCTTAAGGCAGCCGATC

Downstream 100 bases:

>100_bases
GCGACGCCGTCCGCATTGACATTCGAATCCGCCCGCCAAGTGTCTCGACCCGCGTCGCGGCGTCGTTTGCGCGCGCCGGC
CGCAAATTGGCTGCCGAGCC

Product: binding-protein-dependent transporters inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKELSVAEFGRRLAHLLVSLFILLCVTFVIGRVLPTDPVGAIVGELADPAAYAAMRARLGLDLPIYQQFFLYLNGLAHGD
FGTAVLTGNPVSSDLAQAFPATFELATLAVIISTFVGVPLGLVAALFRDSFIDKIARVVALVGHSIPVFWFGIVGLVIFY
AGLNWVGGPGRIDVFYEGLVEPRTGLLLIDSLLQGETEIFWNALGHIILPAIILAYAAMAYITRMTRSFTLEQLSQDYVI
AARAKGVSPFGTIWHHVLPNIAVQLITILAISYGGLLEGAVVTEIVFSWPGIGQYMTNALMIGDMNAIVAGTIIVGFIFM
LLNFLADVAYAVFDPRMREAAR

Sequences:

>Translated_342_residues
MKELSVAEFGRRLAHLLVSLFILLCVTFVIGRVLPTDPVGAIVGELADPAAYAAMRARLGLDLPIYQQFFLYLNGLAHGD
FGTAVLTGNPVSSDLAQAFPATFELATLAVIISTFVGVPLGLVAALFRDSFIDKIARVVALVGHSIPVFWFGIVGLVIFY
AGLNWVGGPGRIDVFYEGLVEPRTGLLLIDSLLQGETEIFWNALGHIILPAIILAYAAMAYITRMTRSFTLEQLSQDYVI
AARAKGVSPFGTIWHHVLPNIAVQLITILAISYGGLLEGAVVTEIVFSWPGIGQYMTNALMIGDMNAIVAGTIIVGFIFM
LLNFLADVAYAVFDPRMREAAR
>Mature_342_residues
MKELSVAEFGRRLAHLLVSLFILLCVTFVIGRVLPTDPVGAIVGELADPAAYAAMRARLGLDLPIYQQFFLYLNGLAHGD
FGTAVLTGNPVSSDLAQAFPATFELATLAVIISTFVGVPLGLVAALFRDSFIDKIARVVALVGHSIPVFWFGIVGLVIFY
AGLNWVGGPGRIDVFYEGLVEPRTGLLLIDSLLQGETEIFWNALGHIILPAIILAYAAMAYITRMTRSFTLEQLSQDYVI
AARAKGVSPFGTIWHHVLPNIAVQLITILAISYGGLLEGAVVTEIVFSWPGIGQYMTNALMIGDMNAIVAGTIIVGFIFM
LLNFLADVAYAVFDPRMREAAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=335, Percent_Identity=37.910447761194, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1787761, Length=315, Percent_Identity=40.3174603174603, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=36.1313868613139, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1787053, Length=328, Percent_Identity=30.7926829268293, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1789888, Length=291, Percent_Identity=31.6151202749141, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787497, Length=332, Percent_Identity=31.0240963855422, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1788504, Length=303, Percent_Identity=28.7128712871287, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36979; Mature: 36979

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELSVAEFGRRLAHLLVSLFILLCVTFVIGRVLPTDPVGAIVGELADPAAYAAMRARLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
LDLPIYQQFFLYLNGLAHGDFGTAVLTGNPVSSDLAQAFPATFELATLAVIISTFVGVPL
CCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GLVAALFRDSFIDKIARVVALVGHSIPVFWFGIVGLVIFYAGLNWVGGPGRIDVFYEGLV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
EPRTGLLLIDSLLQGETEIFWNALGHIILPAIILAYAAMAYITRMTRSFTLEQLSQDYVI
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
AARAKGVSPFGTIWHHVLPNIAVQLITILAISYGGLLEGAVVTEIVFSWPGIGQYMTNAL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
MIGDMNAIVAGTIIVGFIFMLLNFLADVAYAVFDPRMREAAR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
>Mature Secondary Structure
MKELSVAEFGRRLAHLLVSLFILLCVTFVIGRVLPTDPVGAIVGELADPAAYAAMRARLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
LDLPIYQQFFLYLNGLAHGDFGTAVLTGNPVSSDLAQAFPATFELATLAVIISTFVGVPL
CCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GLVAALFRDSFIDKIARVVALVGHSIPVFWFGIVGLVIFYAGLNWVGGPGRIDVFYEGLV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
EPRTGLLLIDSLLQGETEIFWNALGHIILPAIILAYAAMAYITRMTRSFTLEQLSQDYVI
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
AARAKGVSPFGTIWHHVLPNIAVQLITILAISYGGLLEGAVVTEIVFSWPGIGQYMTNAL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH
MIGDMNAIVAGTIIVGFIFMLLNFLADVAYAVFDPRMREAAR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]