| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yurO [H]
Identifier: 209549282
GI number: 209549282
Start: 1715010
End: 1716314
Strand: Direct
Name: yurO [H]
Synonym: Rleg2_1685
Alternate gene names: 209549282
Gene position: 1715010-1716314 (Clockwise)
Preceding gene: 209549278
Following gene: 209549283
Centisome position: 37.79
GC content: 61.69
Gene sequence:
>1305_bases ATGAATTTTATGCTGAAGAACGCCGCTTTCGGCGGCAGGCGCATTGTATCCATGGCCGCGGCAGCCGGCCTGTTGCTGGC GGGAGCGGGTGCCGCCTCGGCGACGACGGTGGTGAAATGGCTGCATCTCGAGCTCGACCCGAAAAACGTTGCGGCCTGGG AAGATATCGTCAAGAAATACGAAGCCCAGCATCCCGACGTCGACATCCAGATGCAGTTCCTCGAAAACGAGGCCTTCAAG GCCAAGCTTCCGACATTGCTGCAGTCCGACGACGTGCCGGATTTCTTTTTCAGCTGGGGCGGCGGCGTGTTGAAGCAGCA GTCCGAGACCGGCGCGCTCCAGGATGTGACGGCAGCGCTTGATGCCGATGGCGGCAAGCTGCGCAGCGCCTATACCCCGG CTTCGGTCGATGGCCTGACTTTCGAGGGCAAGACCTGGGCCATTCCCTACAAGGTCGGTCTCGTCAGCTTCTTCTACAAC AAGGCGCTGTTTGCCAAGGCCGGCGTCAAGGCCGAAGACATCAAGACCTGGAGCGATTTTCTCGCCACGGTGAAGAAGAT CAAGGCGGCCGGCATCGTGCCGATCGCCGGCGGCGGCGGTGAGAAATGGCCGATCCATTTCTACTGGAGCTATCTCGTCA TGCGCGAGGGCGGCCAGAAGGTCTTCGAAGCGGCCAAGAACGGCGAGGGCGAAGGCTTCCTCGATCCCACTATCATCAAG GCCGGCGACGACCTCGCCGAACTCGGCAAGCTCGAACCGTTCCAGCCCGGCTATCTCGGTGCGACCTGGCCGCAGACGCT CGGCGTTTTCGGCGACGGCAAGGCGGCGATGATCCTCGGCTTTGAAGCGACAGAGGCCAACCAGCGCAAGAATGCCGGCG ACGGCAAGGGGCTTTCCTCAGACAATATCGGCCGTTTCGTCTTCCCGACGGTCGAAGGCGGCGCCGGCAAGCCGACCGAT ACGCTCGGCGGCTTGAACGGCTGGGCCGTCACCAAGAAGGCCTCCAAGGAAGCGCTCAATTTCCTCGCTTTCCTGACGAG CGCGGAGAATGAACGGGCGATGGCCAAATCAGGCATGTTGCTTCCCGTTGCCGTCGGCGCCGATGACGGCGTCGTCAATC CGTTGCTGGCCGAATCGGCCAAACAGCTTGCCGGTTCGACCTGGCATCAGAACTTCTTCGACCAGGATCTCGGCGCTGCC GTCGGCCGCGTCGTCAACGACGTCTCCGTGGAAATCGTCTCCGGCCAGATGAATTCCAAGGACGGCGCCCAGATGATCCA GGACGCTTTCGAGCTGGAACAATAA
Upstream 100 bases:
>100_bases GTAAAAATAGCAGCAATTGGGTTGACATCCGGACAAAGCTCCGTTGAATTAATCCGCATAGGGGAAAAATTGTGAGGATA GACCCCTGGGAGGAAAATCA
Downstream 100 bases:
>100_bases CCAGCGCCCGCAGAGCCTTTCCGGCGCTTCCGATCAAACGGAGCGCCGGCATTGCTGCCGACGAACGAAAGCAGGACCCA TGGCCAATATTTCAGTACCC
Product: family 1 extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNFMLKNAAFGGRRIVSMAAAAGLLLAGAGAASATTVVKWLHLELDPKNVAAWEDIVKKYEAQHPDVDIQMQFLENEAFK AKLPTLLQSDDVPDFFFSWGGGVLKQQSETGALQDVTAALDADGGKLRSAYTPASVDGLTFEGKTWAIPYKVGLVSFFYN KALFAKAGVKAEDIKTWSDFLATVKKIKAAGIVPIAGGGGEKWPIHFYWSYLVMREGGQKVFEAAKNGEGEGFLDPTIIK AGDDLAELGKLEPFQPGYLGATWPQTLGVFGDGKAAMILGFEATEANQRKNAGDGKGLSSDNIGRFVFPTVEGGAGKPTD TLGGLNGWAVTKKASKEALNFLAFLTSAENERAMAKSGMLLPVAVGADDGVVNPLLAESAKQLAGSTWHQNFFDQDLGAA VGRVVNDVSVEIVSGQMNSKDGAQMIQDAFELEQ
Sequences:
>Translated_434_residues MNFMLKNAAFGGRRIVSMAAAAGLLLAGAGAASATTVVKWLHLELDPKNVAAWEDIVKKYEAQHPDVDIQMQFLENEAFK AKLPTLLQSDDVPDFFFSWGGGVLKQQSETGALQDVTAALDADGGKLRSAYTPASVDGLTFEGKTWAIPYKVGLVSFFYN KALFAKAGVKAEDIKTWSDFLATVKKIKAAGIVPIAGGGGEKWPIHFYWSYLVMREGGQKVFEAAKNGEGEGFLDPTIIK AGDDLAELGKLEPFQPGYLGATWPQTLGVFGDGKAAMILGFEATEANQRKNAGDGKGLSSDNIGRFVFPTVEGGAGKPTD TLGGLNGWAVTKKASKEALNFLAFLTSAENERAMAKSGMLLPVAVGADDGVVNPLLAESAKQLAGSTWHQNFFDQDLGAA VGRVVNDVSVEIVSGQMNSKDGAQMIQDAFELEQ >Mature_434_residues MNFMLKNAAFGGRRIVSMAAAAGLLLAGAGAASATTVVKWLHLELDPKNVAAWEDIVKKYEAQHPDVDIQMQFLENEAFK AKLPTLLQSDDVPDFFFSWGGGVLKQQSETGALQDVTAALDADGGKLRSAYTPASVDGLTFEGKTWAIPYKVGLVSFFYN KALFAKAGVKAEDIKTWSDFLATVKKIKAAGIVPIAGGGGEKWPIHFYWSYLVMREGGQKVFEAAKNGEGEGFLDPTIIK AGDDLAELGKLEPFQPGYLGATWPQTLGVFGDGKAAMILGFEATEANQRKNAGDGKGLSSDNIGRFVFPTVEGGAGKPTD TLGGLNGWAVTKKASKEALNFLAFLTSAENERAMAKSGMLLPVAVGADDGVVNPLLAESAKQLAGSTWHQNFFDQDLGAA VGRVVNDVSVEIVSGQMNSKDGAQMIQDAFELEQ
Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46156; Mature: 46156
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFMLKNAAFGGRRIVSMAAAAGLLLAGAGAASATTVVKWLHLELDPKNVAAWEDIVKKY CCCEECCCCCCCHHHHHHHHHHHHHEECCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHH EAQHPDVDIQMQFLENEAFKAKLPTLLQSDDVPDFFFSWGGGVLKQQSETGALQDVTAAL HCCCCCCCEEEEEECCCHHHHHCCHHHCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHH DADGGKLRSAYTPASVDGLTFEGKTWAIPYKVGLVSFFYNKALFAKAGVKAEDIKTWSDF CCCCCCEECCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LATVKKIKAAGIVPIAGGGGEKWPIHFYWSYLVMREGGQKVFEAAKNGEGEGFLDPTIIK HHHHHHHHHCCEEEEECCCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCEEEE AGDDLAELGKLEPFQPGYLGATWPQTLGVFGDGKAAMILGFEATEANQRKNAGDGKGLSS CCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC DNIGRFVFPTVEGGAGKPTDTLGGLNGWAVTKKASKEALNFLAFLTSAENERAMAKSGML CCCCEEEEEEECCCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCE LPVAVGADDGVVNPLLAESAKQLAGSTWHQNFFDQDLGAAVGRVVNDVSVEIVSGQMNSK EEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC DGAQMIQDAFELEQ HHHHHHHHHHHCCC >Mature Secondary Structure MNFMLKNAAFGGRRIVSMAAAAGLLLAGAGAASATTVVKWLHLELDPKNVAAWEDIVKKY CCCEECCCCCCCHHHHHHHHHHHHHEECCCCHHHHHEEEEEEEEECCCHHHHHHHHHHHH EAQHPDVDIQMQFLENEAFKAKLPTLLQSDDVPDFFFSWGGGVLKQQSETGALQDVTAAL HCCCCCCCEEEEEECCCHHHHHCCHHHCCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHH DADGGKLRSAYTPASVDGLTFEGKTWAIPYKVGLVSFFYNKALFAKAGVKAEDIKTWSDF CCCCCCEECCCCCCCCCCEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LATVKKIKAAGIVPIAGGGGEKWPIHFYWSYLVMREGGQKVFEAAKNGEGEGFLDPTIIK HHHHHHHHHCCEEEEECCCCCCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCEEEE AGDDLAELGKLEPFQPGYLGATWPQTLGVFGDGKAAMILGFEATEANQRKNAGDGKGLSS CCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC DNIGRFVFPTVEGGAGKPTDTLGGLNGWAVTKKASKEALNFLAFLTSAENERAMAKSGML CCCCEEEEEEECCCCCCCCHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHHHCCCE LPVAVGADDGVVNPLLAESAKQLAGSTWHQNFFDQDLGAAVGRVVNDVSVEIVSGQMNSK EEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC DGAQMIQDAFELEQ HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]