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The map label for this gene is ydgJ [C]

Identifier: 209548987

GI number: 209548987

Start: 1406391

End: 1407560

Strand: Direct

Name: ydgJ [C]

Synonym: Rleg2_1384

Alternate gene names: 209548987

Gene position: 1406391-1407560 (Clockwise)

Preceding gene: 209548986

Following gene: 209548988

Centisome position: 30.99

GC content: 60.26

Gene sequence:

>1170_bases
ATGTCTGAAGTGAGAGTTGCAGTGCTAGGCGCCTCGGGCTGGATGGGAAAGGTCCATACGATGGCCTACCAGACCTTTCC
GCATTTCTTCGGCGTGTCGGACGGAACGGCGCGGATCGTCGCGCTGGTCGACGGCAATCCCGACGTTGCCGCGGATATTG
CCAACAGGGCGCCGGGGGCCAGGATCTATCAGGATTGGAAGCTGGCGGTCGCCGATCCCGAGGTCGATCTGATCGATATC
TGTCTGCCCGATCACCTTCACTATCCGGTGGCCAAGGCGGCTCTGCTGGCCGGCAAACATGTCTATTGCGAGAAGCCATT
GGCCAACACCGCCGATGAGGCGCGGGAGCTTGCCGACATCGCCAGAGAGAAGGGTGTGATCACCCGTGTCGGACACGCCT
TTCCCCGCAATCCCGTCCATGATCTGGCGAAAGACATCATAGAATCCGGCGAAATCGGCGAGATCAAGCTCTTCCGCGGC
TGCCAGCACGTCGACATGTATGGTGATCCCATGGCCCCCTTCATGTGGCGCGCCGATGGTAAGCTGGCGCCGACTGGGAT
CGTCGGCGATACCGGCTCGCACATCTTCAGCTTCATGGATTTCCTGGTCGGCCGCGTCAGTTCCCTGATTGCCGACAATC
TCATCGTCACGCCGCGCCGGCCCGTCGTCGAGGGCCTTGATTATGGCGAGCAGGTGAAACTGACAGGCAGCGAATCCTGG
GCCGATATCACCAACCCCGACGCCACGAACCTGCTCTGCCGGTTTGCCAACGGCGCAGGCGGGATCGTCGATTTCAGCCG
TGTCGCGACCGGTCGCAAGTTCATGCAGACCTATGAAGTCTATGGAACCAAAGGCAGCATCGCCTATACCTATGACGAGA
TAAACCGGCTGCGCTTCTACTCCAACGACGACCGGACGGGGCGGCGCGGCTTCCGGGAGATCGATGTCGGCCCGGAAAAT
CCCACCTTCCGCGCTTTCCTTCCCTTGCCGAATTTCGGCATAGGCTACAATGAAAGCAAGATCATCGAGGTGGCCGAAGT
GATCCGCTCGATCGTTGCAAACAGACCGATGTGGCCGACCTTCGATACCGGCCACCATATCTGCCAGATCGTCGACGCAT
GCATGGAGTCTTCCCGCCAGAAGCGCTGGGTCGACATCCCGTTGGGCTGA

Upstream 100 bases:

>100_bases
TGATCAGGGGCTTGCCTGCGCTGCCGTCGGCAATCTTTGCCTATGAACGCAACGATGTCAGGCCTCGGGCCCGCGCCGAA
ATCCGCTAAGGAGTAGTGAT

Downstream 100 bases:

>100_bases
CGTCGATGAGCACAGCTGTTCCGCAGGAAATTCTCGACGCGCTGACCGATGTCGACATGCCCAAGCTCCCGCCAGAGGCT
GGCCCCTCGGGCTCGACCCG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSEVRVAVLGASGWMGKVHTMAYQTFPHFFGVSDGTARIVALVDGNPDVAADIANRAPGARIYQDWKLAVADPEVDLIDI
CLPDHLHYPVAKAALLAGKHVYCEKPLANTADEARELADIAREKGVITRVGHAFPRNPVHDLAKDIIESGEIGEIKLFRG
CQHVDMYGDPMAPFMWRADGKLAPTGIVGDTGSHIFSFMDFLVGRVSSLIADNLIVTPRRPVVEGLDYGEQVKLTGSESW
ADITNPDATNLLCRFANGAGGIVDFSRVATGRKFMQTYEVYGTKGSIAYTYDEINRLRFYSNDDRTGRRGFREIDVGPEN
PTFRAFLPLPNFGIGYNESKIIEVAEVIRSIVANRPMWPTFDTGHHICQIVDACMESSRQKRWVDIPLG

Sequences:

>Translated_389_residues
MSEVRVAVLGASGWMGKVHTMAYQTFPHFFGVSDGTARIVALVDGNPDVAADIANRAPGARIYQDWKLAVADPEVDLIDI
CLPDHLHYPVAKAALLAGKHVYCEKPLANTADEARELADIAREKGVITRVGHAFPRNPVHDLAKDIIESGEIGEIKLFRG
CQHVDMYGDPMAPFMWRADGKLAPTGIVGDTGSHIFSFMDFLVGRVSSLIADNLIVTPRRPVVEGLDYGEQVKLTGSESW
ADITNPDATNLLCRFANGAGGIVDFSRVATGRKFMQTYEVYGTKGSIAYTYDEINRLRFYSNDDRTGRRGFREIDVGPEN
PTFRAFLPLPNFGIGYNESKIIEVAEVIRSIVANRPMWPTFDTGHHICQIVDACMESSRQKRWVDIPLG
>Mature_388_residues
SEVRVAVLGASGWMGKVHTMAYQTFPHFFGVSDGTARIVALVDGNPDVAADIANRAPGARIYQDWKLAVADPEVDLIDIC
LPDHLHYPVAKAALLAGKHVYCEKPLANTADEARELADIAREKGVITRVGHAFPRNPVHDLAKDIIESGEIGEIKLFRGC
QHVDMYGDPMAPFMWRADGKLAPTGIVGDTGSHIFSFMDFLVGRVSSLIADNLIVTPRRPVVEGLDYGEQVKLTGSESWA
DITNPDATNLLCRFANGAGGIVDFSRVATGRKFMQTYEVYGTKGSIAYTYDEINRLRFYSNDDRTGRRGFREIDVGPENP
TFRAFLPLPNFGIGYNESKIIEVAEVIRSIVANRPMWPTFDTGHHICQIVDACMESSRQKRWVDIPLG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787574, Length=156, Percent_Identity=30.7692307692308, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323975, Length=222, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42944; Mature: 42813

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVRVAVLGASGWMGKVHTMAYQTFPHFFGVSDGTARIVALVDGNPDVAADIANRAPGA
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCC
RIYQDWKLAVADPEVDLIDICLPDHLHYPVAKAALLAGKHVYCEKPLANTADEARELADI
EEEECCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
AREKGVITRVGHAFPRNPVHDLAKDIIESGEIGEIKLFRGCQHVDMYGDPMAPFMWRADG
HHHCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCC
KLAPTGIVGDTGSHIFSFMDFLVGRVSSLIADNLIVTPRRPVVEGLDYGEQVKLTGSESW
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCEEEEECCCCC
ADITNPDATNLLCRFANGAGGIVDFSRVATGRKFMQTYEVYGTKGSIAYTYDEINRLRFY
CCCCCCCHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHEEEE
SNDDRTGRRGFREIDVGPENPTFRAFLPLPNFGIGYNESKIIEVAEVIRSIVANRPMWPT
CCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FDTGHHICQIVDACMESSRQKRWVDIPLG
CCCHHHHHHHHHHHHHCCCCCEEEECCCC
>Mature Secondary Structure 
SEVRVAVLGASGWMGKVHTMAYQTFPHFFGVSDGTARIVALVDGNPDVAADIANRAPGA
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCC
RIYQDWKLAVADPEVDLIDICLPDHLHYPVAKAALLAGKHVYCEKPLANTADEARELADI
EEEECCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
AREKGVITRVGHAFPRNPVHDLAKDIIESGEIGEIKLFRGCQHVDMYGDPMAPFMWRADG
HHHCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCC
KLAPTGIVGDTGSHIFSFMDFLVGRVSSLIADNLIVTPRRPVVEGLDYGEQVKLTGSESW
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCEEEEECCCCC
ADITNPDATNLLCRFANGAGGIVDFSRVATGRKFMQTYEVYGTKGSIAYTYDEINRLRFY
CCCCCCCHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHEEEE
SNDDRTGRRGFREIDVGPENPTFRAFLPLPNFGIGYNESKIIEVAEVIRSIVANRPMWPT
CCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
FDTGHHICQIVDACMESSRQKRWVDIPLG
CCCHHHHHHHHHHHHHCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]