| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209548985
Identifier: 209548985
GI number: 209548985
Start: 1403176
End: 1404714
Strand: Direct
Name: 209548985
Synonym: Rleg2_1382
Alternate gene names: NA
Gene position: 1403176-1404714 (Clockwise)
Preceding gene: 209548984
Following gene: 209548986
Centisome position: 30.92
GC content: 61.79
Gene sequence:
>1539_bases ATGAGCAGTTCACCAGACATCGTCATCATCGGTTCAGGCGTCGGCGGCTCCACCGTCGCGGCCGGCCTGGCTGCATCAGG CGCGGAGATATTGATCCTCGAAGCCGGCGATCACATTGCCGATCTTCCCGTCAATCGCGATCAGCGCGCGATCTTCCAGC GGGGCCATTTCCGACCGAAGGAAACCTGGTACGAGGCGAACGGCAAGGGTTTCAATCCCGGCAACTATTACAATGTCGGC GGCAATTCGAAGTTCTACGGCGCCGTCCTGTCGCGCTACCGCAAAGAGGATTTCGGTGTCATCCAGCACCGGGAGGGTGT GTCGCCGGCTTGGCCCTTTGCCTATGAGGAGCTCGAGCCGTGGTACTCGAAGGCGGAGCGGATGTATCAGGTTCGCGGCA GCCTGGGCGAAGATCCGACGGAACCGCACCACTCGGCTGGCTATGCGTATCCGCCGGTGCCTGACGAGGCGCCGATCGCC GACATCAGAGCCCGCCTCAAGCAGAAGGGTCTGCATCCCTTTTCCCTGCCGCTCGGCATGGATCTCGATGCTTGGCTCTC CAAGGCGCGGACGCCATGGGATGCACATCCGAACGCACGGGACGGCAAGATGGACGCCGAGACCGCAGCCCTTGCGGTGG CGCTGAAGTATGAAAACGTTAGGCTCGAAACCAATGCGCGTGTGACTCGGCTCGACACGGGAGCCGGGAGCCGGATCGAC CGGGTCACCTATATCAAGAACGGTGAGACGCTGACGGTTTCGCCGAAGCTCGTCATTCTCTCGGCGGGCGCGGTCCAGTC GTCGGTGCTGTTGCTGCGTTCGAAGACCGACCGTTTCCCGAGGGGGCTGGCGAACTCCTCCGACCAAGTGGGCCGCAACT TCATGAACCACAATGCCTCCGCCGTCATCGGCGTCTCGCCACGGTTTAAGAACACCGCCGTCTATCAGAAGACCTTTGCC TTCAACGACTTCTATCTCTCCGACGGGGAGGGTGGGCCACCGCTCGGCAACGTGCAGTTGCTGGGCCGCATCTCCGAAAA AGTTCTGAAGGGCTCCCTGCCGCAGGCGCCGGAATGGCTACTGCGTTTCATCACCAACCATGCCATCGACTTCTATGCGA TGAGCGAGGACGTTCCCAATCCGGAAAGCCGCGTCATCGTCGATGGAGATCGGATCATTCTCCAGTGGCAGCGAACCAAC TGGGACGCGCATCTCGCACTTGTCGCCAGGCTGAAAGCGATCCTGAAGTCGATCGGGTTTCCGCTCGTGCTGTCGCGGCC CTTCGACAAGCGCACGCCCTCCCATCAGTGTGGAACGGTCCGCATCGGGAACGACCCCGCAACGGCGCCGCTCGACCCCT ATTGCCGCTCATACGATCACGAGAACCTCTTCGTCGTCGACGCCGGTTTCCTGCCGACCTCGGCCGCGGTCAATCCTGCG CTCACCGTTGCCAGCCAGGCGCTCAGAGTTGCCGACCACATCGCGTCGAAGGACTTGCAGGCAAAATCAGATCCATTGGC GCATGCCGGGCACAAATAG
Upstream 100 bases:
>100_bases CGCTCCCGGACAGAACACACGCCTCGCCTTCAATCTCGACAAGGCCGTGTTCTTCGATCCTGAGAGCCAAGTGCGGATCG TGTGACGGCCAGGTGCTGAT
Downstream 100 bases:
>100_bases GACGGTAAAATGGGCTTCGATTATATCATCACAGGCGCCGGTCCCGCGGGCTGCGTTCTTGCAAGCCGGCTGAGCGAAGA TCCCGATATCCGCGTCCTCC
Product: glucose-methanol-choline oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Choline Dehydrogenase; Gluconate 2-Dehydrogenase; Oxidoreductase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase; Dehydrogenase Subunit-Like Protein; GMC Family Oxidoreductase; Gluconate Dehydrogenase; Glucose Dehydrogenase; GMC Oxidoreductase; GMC Oxidoreductase Family; Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; GMC Oxidoreductase Family Protein; Oxidoreductase-Like Protein; Oxidoreductase Protein; Dehydrogenase Large Subunit Protein; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase GMC Family; Dehydrogluconate Dehydrogenase; Dehydrogenase Oxidoreductase Protein; Glucoside 3-Dehydrogenase; Dehydrogenase Flavoprotein Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; Flavoproteins Oxidoreductases; N-Terminal Membrane-Anchored Dehydrogenase; Gluconate Dehydrogenase Subunit; Glucose Dehydrogenase Subunit Alpha; Dehydrogenase Transmembrane Protein
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSSSPDIVIIGSGVGGSTVAAGLAASGAEILILEAGDHIADLPVNRDQRAIFQRGHFRPKETWYEANGKGFNPGNYYNVG GNSKFYGAVLSRYRKEDFGVIQHREGVSPAWPFAYEELEPWYSKAERMYQVRGSLGEDPTEPHHSAGYAYPPVPDEAPIA DIRARLKQKGLHPFSLPLGMDLDAWLSKARTPWDAHPNARDGKMDAETAALAVALKYENVRLETNARVTRLDTGAGSRID RVTYIKNGETLTVSPKLVILSAGAVQSSVLLLRSKTDRFPRGLANSSDQVGRNFMNHNASAVIGVSPRFKNTAVYQKTFA FNDFYLSDGEGGPPLGNVQLLGRISEKVLKGSLPQAPEWLLRFITNHAIDFYAMSEDVPNPESRVIVDGDRIILQWQRTN WDAHLALVARLKAILKSIGFPLVLSRPFDKRTPSHQCGTVRIGNDPATAPLDPYCRSYDHENLFVVDAGFLPTSAAVNPA LTVASQALRVADHIASKDLQAKSDPLAHAGHK
Sequences:
>Translated_512_residues MSSSPDIVIIGSGVGGSTVAAGLAASGAEILILEAGDHIADLPVNRDQRAIFQRGHFRPKETWYEANGKGFNPGNYYNVG GNSKFYGAVLSRYRKEDFGVIQHREGVSPAWPFAYEELEPWYSKAERMYQVRGSLGEDPTEPHHSAGYAYPPVPDEAPIA DIRARLKQKGLHPFSLPLGMDLDAWLSKARTPWDAHPNARDGKMDAETAALAVALKYENVRLETNARVTRLDTGAGSRID RVTYIKNGETLTVSPKLVILSAGAVQSSVLLLRSKTDRFPRGLANSSDQVGRNFMNHNASAVIGVSPRFKNTAVYQKTFA FNDFYLSDGEGGPPLGNVQLLGRISEKVLKGSLPQAPEWLLRFITNHAIDFYAMSEDVPNPESRVIVDGDRIILQWQRTN WDAHLALVARLKAILKSIGFPLVLSRPFDKRTPSHQCGTVRIGNDPATAPLDPYCRSYDHENLFVVDAGFLPTSAAVNPA LTVASQALRVADHIASKDLQAKSDPLAHAGHK >Mature_511_residues SSSPDIVIIGSGVGGSTVAAGLAASGAEILILEAGDHIADLPVNRDQRAIFQRGHFRPKETWYEANGKGFNPGNYYNVGG NSKFYGAVLSRYRKEDFGVIQHREGVSPAWPFAYEELEPWYSKAERMYQVRGSLGEDPTEPHHSAGYAYPPVPDEAPIAD IRARLKQKGLHPFSLPLGMDLDAWLSKARTPWDAHPNARDGKMDAETAALAVALKYENVRLETNARVTRLDTGAGSRIDR VTYIKNGETLTVSPKLVILSAGAVQSSVLLLRSKTDRFPRGLANSSDQVGRNFMNHNASAVIGVSPRFKNTAVYQKTFAF NDFYLSDGEGGPPLGNVQLLGRISEKVLKGSLPQAPEWLLRFITNHAIDFYAMSEDVPNPESRVIVDGDRIILQWQRTNW DAHLALVARLKAILKSIGFPLVLSRPFDKRTPSHQCGTVRIGNDPATAPLDPYCRSYDHENLFVVDAGFLPTSAAVNPAL TVASQALRVADHIASKDLQAKSDPLAHAGHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56041; Mature: 55910
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSPDIVIIGSGVGGSTVAAGLAASGAEILILEAGDHIADLPVNRDQRAIFQRGHFRPK CCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEECCCCCCCHHHHHHCCCCCCH ETWYEANGKGFNPGNYYNVGGNSKFYGAVLSRYRKEDFGVIQHREGVSPAWPFAYEELEP HCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHH WYSKAERMYQVRGSLGEDPTEPHHSAGYAYPPVPDEAPIADIRARLKQKGLHPFSLPLGM HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCC DLDAWLSKARTPWDAHPNARDGKMDAETAALAVALKYENVRLETNARVTRLDTGAGSRID CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCCEEEEEECCCCCCCE RVTYIKNGETLTVSPKLVILSAGAVQSSVLLLRSKTDRFPRGLANSSDQVGRNFMNHNAS EEEEEECCCEEEECCEEEEEECCCHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCC AVIGVSPRFKNTAVYQKTFAFNDFYLSDGEGGPPLGNVQLLGRISEKVLKGSLPQAPEWL EEEECCCCCCCCEEEEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH LRFITNHAIDFYAMSEDVPNPESRVIVDGDRIILQWQRTNWDAHLALVARLKAILKSIGF HHHHHHHCEEEEEECCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC PLVLSRPFDKRTPSHQCGTVRIGNDPATAPLDPYCRSYDHENLFVVDAGFLPTSAAVNPA CEEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHH LTVASQALRVADHIASKDLQAKSDPLAHAGHK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSPDIVIIGSGVGGSTVAAGLAASGAEILILEAGDHIADLPVNRDQRAIFQRGHFRPK CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEECCCCCCCHHHHHHCCCCCCH ETWYEANGKGFNPGNYYNVGGNSKFYGAVLSRYRKEDFGVIQHREGVSPAWPFAYEELEP HCEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHH WYSKAERMYQVRGSLGEDPTEPHHSAGYAYPPVPDEAPIADIRARLKQKGLHPFSLPLGM HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCC DLDAWLSKARTPWDAHPNARDGKMDAETAALAVALKYENVRLETNARVTRLDTGAGSRID CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCCEEEEEECCCCCCCE RVTYIKNGETLTVSPKLVILSAGAVQSSVLLLRSKTDRFPRGLANSSDQVGRNFMNHNAS EEEEEECCCEEEECCEEEEEECCCHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCC AVIGVSPRFKNTAVYQKTFAFNDFYLSDGEGGPPLGNVQLLGRISEKVLKGSLPQAPEWL EEEECCCCCCCCEEEEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH LRFITNHAIDFYAMSEDVPNPESRVIVDGDRIILQWQRTNWDAHLALVARLKAILKSIGF HHHHHHHCEEEEEECCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC PLVLSRPFDKRTPSHQCGTVRIGNDPATAPLDPYCRSYDHENLFVVDAGFLPTSAAVNPA CEEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCHH LTVASQALRVADHIASKDLQAKSDPLAHAGHK HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA