| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548981
Identifier: 209548981
GI number: 209548981
Start: 1398742
End: 1400004
Strand: Direct
Name: 209548981
Synonym: Rleg2_1378
Alternate gene names: NA
Gene position: 1398742-1400004 (Clockwise)
Preceding gene: 209548980
Following gene: 209548982
Centisome position: 30.82
GC content: 62.23
Gene sequence:
>1263_bases ATGAATAGGTTTTTGACCACGACGGCGATGATCGCATTGGCTCTGGCCGGCGCGCATGTCTCCGCCCGCGGAGCCGACGT GAAGGAAGTTCAGATGCTGCATTGGTGGACGTCTGGCGGCGAGGCGGCGGCTTTGAACGTGCTGAAGCAGGATCTGTCGA AGGAAGGTTTTGCCTGGAAGGACGTTCCAGTGGCCGGCGGCGGCGGTGATGCGGCGATGACGGCACTGAAGGCGATGGTT GCGGCCGGCACCTATCCGACGGCCTCGCAGATGCTGGGCTATACCGTGCTCGATTATGCCCAGGCCGGCGTCATGGGCGA CCTGACCGAGACGGCGAAGAAGGAAGGCTGGGACAAGTCGGTGCCGGCGGCGCTGCAGAAGTTCTCGGTCTATGACGGCA AGTGGGTCGCAGCCCCTGTTAACGTGCACTCGGTCAACTGGCTGTGGATCAACAAGGCGGTGATGGACAAGATCGGCGGC ACCCAGCCGAAGACCTTCGACGATCTGATCGCGCTGCTCGACAAGGCCAAGGCCGCAGGTGTCATCCCCTTGGCGCTCGG CGGTCAGAACTGGCAGGAAGCGACGATGTTCGATTCCATCGTGCTGTCGACCGGCGGGCCGGAATTCTACAAGAAGGCCT TCAACGATCTCGATGAGGAGTCGCTGAAGTCGGACACGATGAAGAAGTCCTTCGACAATCTGGCGACGATCATCAAATAT GTCGATCCGAACTTCTCCGGCCGCGACTGGAACCTGGCGACCGCCATGGTCATCAAGGGTGATGCGCTGGTGCAGGTGAT GGGCGACTGGGCCAAGGGCGAATTCGTCGCCGCCAAGAAGACCCCGGATACCGACTTCCTCTGCTACCGCTTCCCCGGCA CCGAAGGCAGCGTCGTCTATAACTCCGACATGTTCGGCATGTTCAACGTTCCCGATGACCGCAAGGCCGCTCAGGTGGCG CTGGCAACCGCGACGCTGTCGAAGAGCTTCCAGTCGGCCTTCAACGTCGTCAAGGGTTCGGTGCCGGCCCGCACCGACGT TCCCGACACCGACTTCGATGCCTGCGGCAAGAAGGGCATCGCCGATCTGAAGGCGGCCAATGAGGGCGGCACGCTGTTCG GCTCGCTGGCCCAGGGCTATGGCGCGCCTCCGGCCATCGCCAATGCCTATAAGGACGTGGTCTCGAAGTTCGTCCACGGC CAGATCAAGAGCTCCGACGAAGCCGTCAAGCAGCTCGTCCAGGCGATCGACGACGCTCGCTGA
Upstream 100 bases:
>100_bases AAGCCGGCTTAGCCGGCGAGGAAACTACGCCCGAGGAGGGCGGGTGATCGGATGCGGGAATGGTCCCGCATCTTCCAAGA GGGAACTGGGAGGTTCTTCG
Downstream 100 bases:
>100_bases GATCAGCCGATGACAACGCTTCCCCACGCATGTCGTGGGGAAGCTTCAGGCTCCGCGACGATCAGGCGGGGACGATCGGG CAGGGCCGATCATGCGGGAA
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG QIKSSDEAVKQLVQAIDDAR
Sequences:
>Translated_420_residues MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG QIKSSDEAVKQLVQAIDDAR >Mature_420_residues MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWKDVPVAGGGGDAAMTALKAMV AAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKSVPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGG TQPKTFDDLIALLDKAKAAGVIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVYNSDMFGMFNVPDDRKAAQVA LATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHG QIKSSDEAVKQLVQAIDDAR
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44787; Mature: 44787
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWK CCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC DVPVAGGGGDAAMTALKAMVAAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKS CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH VPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGGTQPKTFDDLIALLDKAKAAG HHHHHHHHHCCCCCEEEEECEEEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC VIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY EEEEEECCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVY HCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEE NSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGI CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC ADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHGQIKSSDEAVKQLVQAIDDAR HHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRFLTTTAMIALALAGAHVSARGADVKEVQMLHWWTSGGEAAALNVLKQDLSKEGFAWK CCCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC DVPVAGGGGDAAMTALKAMVAAGTYPTASQMLGYTVLDYAQAGVMGDLTETAKKEGWDKS CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH VPAALQKFSVYDGKWVAAPVNVHSVNWLWINKAVMDKIGGTQPKTFDDLIALLDKAKAAG HHHHHHHHHCCCCCEEEEECEEEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC VIPLALGGQNWQEATMFDSIVLSTGGPEFYKKAFNDLDEESLKSDTMKKSFDNLATIIKY EEEEEECCCCCHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFVAAKKTPDTDFLCYRFPGTEGSVVY HCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCEEE NSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGI CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC ADLKAANEGGTLFGSLAQGYGAPPAIANAYKDVVSKFVHGQIKSSDEAVKQLVQAIDDAR HHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]