| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548842
Identifier: 209548842
GI number: 209548842
Start: 1252559
End: 1253395
Strand: Reverse
Name: 209548842
Synonym: Rleg2_1239
Alternate gene names: NA
Gene position: 1253395-1252559 (Counterclockwise)
Preceding gene: 209548843
Following gene: 209548839
Centisome position: 27.62
GC content: 64.4
Gene sequence:
>837_bases TTGCCGCTCGACGTCATCCTGCTCGTTCTCTTCGGCGCATTGCTGCATGCGACATGGAACGCCATCGTCAAGGCGGGAAG CGATAAATCCCTCGATGCGGCGTCGATCTCGGCCGGCGGCGCGGTTTCGGCTCTGCCGTTCCTGGCATTCCTGCCGCTGC CGCAAGCCTCTGCATGGCCGTTCATCGGCGCTTCCGCCATCCTGCAATTCGCCTATTTCCAGCTGGTCGCCGCCGCCTAC CGGGTCGGCGATATCGGTCTCGTCTATCCGTTGATGCGCGGCTGCGCACCGCTGCTGATCGCGGCGACAAGCGGTTTCAT CCTGAAGGAAAATCTTTCCGGCGGCGCCCTTGCCGGCACAATGACGATCTGCGCCGGCGTGCTGACACTTGCTCTTGAGG CACGGCGCGGCAGCAGCCGCGCCGTCATGCTCTCGCTTGCCAATGCCTGCGTCATCGCCAGCTACACCTATGTCGACGGC ATCGGCGCACGCCTTTCCGGCAATGCGGTTTCCTATACGCTGTGGATGTCGCTGCTGCCGCCGGTACTGCTGTTTTCCTG GGCGGTTTCGCAACGCGGCACCGTGGCCGTGGCGCGTCACGTCCGCCGCAACTGGTGGCGCGGCCTGATCGGCGGCGCCG GCTCGATCGCTTCTTACGGGCTGGCCCTCTGGGCGATGACAAAAGCCCCGGTCGCAACCGTTGCGGCCCTGCGCGAGACC GCGATCCTCTTTGCGCTGGTGATCTCGATTCTTGTCTTCAAGGAAAAGGCCAGCCTCTGGCGCTACGTCGCCGGCGTCAT TATCGCCATCGGCGGGCTGGTTCTGAAACTGGCGTGA
Upstream 100 bases:
>100_bases CGCCGTGTATTTCGTGCAAATCCCAGTTGTCTTTTCAGGAATTTGAAACGCCGAAGGCGAGGCGTTTCCAGCGTCCCTCA TCTTTTCCGGATTTACTCCC
Downstream 100 bases:
>100_bases TCACTCGCCCGTCCATTCCGGCGTGCGCTTGTTGAGGAAAGCGCCGATCCCCTCCTCAGCATCCTGCGTCAGCATGTTGT CGACCATCACTTTGGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter Of DMT Superfamily; Transporter Dme Family; Transporter Permease Protein; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Small Multidrug Resistance Protein; Permease Protein; DMT Family Permease
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPLDVILLVLFGALLHATWNAIVKAGSDKSLDAASISAGGAVSALPFLAFLPLPQASAWPFIGASAILQFAYFQLVAAAY RVGDIGLVYPLMRGCAPLLIAATSGFILKENLSGGALAGTMTICAGVLTLALEARRGSSRAVMLSLANACVIASYTYVDG IGARLSGNAVSYTLWMSLLPPVLLFSWAVSQRGTVAVARHVRRNWWRGLIGGAGSIASYGLALWAMTKAPVATVAALRET AILFALVISILVFKEKASLWRYVAGVIIAIGGLVLKLA
Sequences:
>Translated_278_residues MPLDVILLVLFGALLHATWNAIVKAGSDKSLDAASISAGGAVSALPFLAFLPLPQASAWPFIGASAILQFAYFQLVAAAY RVGDIGLVYPLMRGCAPLLIAATSGFILKENLSGGALAGTMTICAGVLTLALEARRGSSRAVMLSLANACVIASYTYVDG IGARLSGNAVSYTLWMSLLPPVLLFSWAVSQRGTVAVARHVRRNWWRGLIGGAGSIASYGLALWAMTKAPVATVAALRET AILFALVISILVFKEKASLWRYVAGVIIAIGGLVLKLA >Mature_277_residues PLDVILLVLFGALLHATWNAIVKAGSDKSLDAASISAGGAVSALPFLAFLPLPQASAWPFIGASAILQFAYFQLVAAAYR VGDIGLVYPLMRGCAPLLIAATSGFILKENLSGGALAGTMTICAGVLTLALEARRGSSRAVMLSLANACVIASYTYVDGI GARLSGNAVSYTLWMSLLPPVLLFSWAVSQRGTVAVARHVRRNWWRGLIGGAGSIASYGLALWAMTKAPVATVAALRETA ILFALVISILVFKEKASLWRYVAGVIIAIGGLVLKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29006; Mature: 28875
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDVILLVLFGALLHATWNAIVKAGSDKSLDAASISAGGAVSALPFLAFLPLPQASAWP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCC FIGASAILQFAYFQLVAAAYRVGDIGLVYPLMRGCAPLLIAATSGFILKENLSGGALAGT CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCHHHHH MTICAGVLTLALEARRGSSRAVMLSLANACVIASYTYVDGIGARLSGNAVSYTLWMSLLP HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHEEHHHHHCCCCEECCCHHHHHHHHHHHH PVLLFSWAVSQRGTVAVARHVRRNWWRGLIGGAGSIASYGLALWAMTKAPVATVAALRET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH AILFALVISILVFKEKASLWRYVAGVIIAIGGLVLKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLDVILLVLFGALLHATWNAIVKAGSDKSLDAASISAGGAVSALPFLAFLPLPQASAWP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCC FIGASAILQFAYFQLVAAAYRVGDIGLVYPLMRGCAPLLIAATSGFILKENLSGGALAGT CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCEEEEECCCCCHHHHH MTICAGVLTLALEARRGSSRAVMLSLANACVIASYTYVDGIGARLSGNAVSYTLWMSLLP HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHEEHHHHHCCCCEECCCHHHHHHHHHHHH PVLLFSWAVSQRGTVAVARHVRRNWWRGLIGGAGSIASYGLALWAMTKAPVATVAALRET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH AILFALVISILVFKEKASLWRYVAGVIIAIGGLVLKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA