| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548821
Identifier: 209548821
GI number: 209548821
Start: 1229401
End: 1230735
Strand: Direct
Name: 209548821
Synonym: Rleg2_1218
Alternate gene names: NA
Gene position: 1229401-1230735 (Clockwise)
Preceding gene: 209548819
Following gene: 209548822
Centisome position: 27.09
GC content: 58.43
Gene sequence:
>1335_bases ATGAACAGAACCGTGAAATCGATCAGCATACTGCCGGCATACCGATTGAAAGCAGCTGTCGCGCTTGCCGGCGCGGCGCT TTTGAGTTTCGGCCTTTCCGCCGCCCGGGCCGACGATCTGGCCGTGTGGGATGACCAGACCTTCGAAGGCCAGAGCGCGG TCATCGAGCAACTGAATAAGGATTTCGAAGCCGCGCATCCCGGTGTCACGATCAAACGCACCGCGCGCACTTTCGATGAC ATGAAGCTGACGCTGAAGCTTGCAGTTTCGGCAGGTGATGGCCCCGTCATCACCAAGGTCAACCAGGGCGCCGGCGACAT GGGCGCGATGGTCAAGGAAGGCTTGCTCCTGCCGGTCGACGAATACATCAAGAAATATGGTTGGGATAAGCGGCAGTCGG ATTCCGTGCTGGCCAGAGACCGCTGGGAGGGCGCGAAATTCGGGGTCGGCAAGACCTACGGCATATCGGGTCTCGGCGAG ATCGTCGGCCTCTACTACAATAAGAAGATCCTCGACGACGCGGGCGTGGCGCTGCCGCAGACCTTCGAGGAACTGTTGGC CGATCTCGACAAGCTGAAGGAAAAAGGCGTTGCGCCCTTCATGATGGGCTCCGCCAAGCAGCATCTTGCCCTGCATATGA TCGGCGCTATCGATCAAGCGCATATCGACGCGGCCAATCGCGCCGAGCTTGACGACCTGATCTACGGCAAGGGCGGTTCC TGGAACACCAAAGGCAACATCGAATCAGCCAAACTCGTGCAGAAATGGGCACAGGGCGGCTATTTCTACCCCGGTTTCGA GGGCATCTCGGGTGACGACGCCGTCCAGCTGTTCATATCAGGGCAGGGCGCATTTCTGATCTCCGGAACCTGGTACTTTG GCGACATGCAAAACAATCCGGATATCGGCTTCATGGCCATTCCCGCGCCGAAGGGTGTCGCCAAACCCATGAGCGTCGGC GGTGTGGATCTTGCCTGGGCGATAACCAGCCTTGCCAAAGACAAGGCGAAGCAGGATCTGGCCGGCGAGTACATCGACTA TATGGTGTCCGAAAAGGCCGCTGAAAGCTGGGCCGCTGCAGGCTATCTTCCTGCAACGTCGCTCCCGGCGGATGCAAAGC CCAAGCTGACGCCGCTCCTGACTTCCGGCATCGAGATGTGGAAGACACTCAACGCCAACGATGCGCTCGGCCATTACCCC GATTGGTCGAGCCCGACGATGCTGAAGACAATCGACGACAACACGCCACTTCTCCTGTCCGGCAAGATCACGCCCGAAGC CTTTGTCGATGCCATGGACAAGGATTATCAGGCCTATTTGAAGGATCAGAAATAA
Upstream 100 bases:
>100_bases TTCGCCGACCAGGCAAAGCTCTGGGGGAAGAAAACGTTCGGCCGGCGCCAGGTGCGAGGCCCGGACGGGGAGTGGAGAAT AAACCAATGAGGTGGAGCAG
Downstream 100 bases:
>100_bases GAAGTGCGGACGCCGGTCACGACCGCTCGTGAGCGGTTCGACCGGCGTCCTATCCATCACATTAAAATGAGCGCGGCGAG CTGACGGCTTGCGGCGCGAT
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter; Male-Type Abc Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK
Sequences:
>Translated_444_residues MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK >Mature_444_residues MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNKDFEAAHPGVTIKRTARTFDD MKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVDEYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGE IVGLYYNKKILDDAGVALPQTFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNPDIGFMAIPAPKGVAKPMSVG GVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAAGYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYP DWSSPTMLKTIDDNTPLLLSGKITPEAFVDAMDKDYQAYLKDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47847; Mature: 47847
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNK CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHH DFEAAHPGVTIKRTARTFDDMKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVD HHHHCCCCEEEEHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHH EYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGEIVGLYYNKKILDDAGVALPQ HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHH TFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCC WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNP CCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCC DIGFMAIPAPKGVAKPMSVGGVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAA CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYPDWSSPTMLKTIDDNTPLLLS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE GKITPEAFVDAMDKDYQAYLKDQK CCCCHHHHHHHHCHHHHHHHCCCC >Mature Secondary Structure MNRTVKSISILPAYRLKAAVALAGAALLSFGLSAARADDLAVWDDQTFEGQSAVIEQLNK CCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCCHHHHHHHHHH DFEAAHPGVTIKRTARTFDDMKLTLKLAVSAGDGPVITKVNQGAGDMGAMVKEGLLLPVD HHHHCCCCEEEEHHHHHHCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHH EYIKKYGWDKRQSDSVLARDRWEGAKFGVGKTYGISGLGEIVGLYYNKKILDDAGVALPQ HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCHH TFEELLADLDKLKEKGVAPFMMGSAKQHLALHMIGAIDQAHIDAANRAELDDLIYGKGGS HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCC WNTKGNIESAKLVQKWAQGGYFYPGFEGISGDDAVQLFISGQGAFLISGTWYFGDMQNNP CCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCC DIGFMAIPAPKGVAKPMSVGGVDLAWAITSLAKDKAKQDLAGEYIDYMVSEKAAESWAAA CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYLPATSLPADAKPKLTPLLTSGIEMWKTLNANDALGHYPDWSSPTMLKTIDDNTPLLLS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE GKITPEAFVDAMDKDYQAYLKDQK CCCCHHHHHHHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA