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The map label for this gene is 209548766

Identifier: 209548766

GI number: 209548766

Start: 1174666

End: 1176180

Strand: Direct

Name: 209548766

Synonym: Rleg2_1163

Alternate gene names: NA

Gene position: 1174666-1176180 (Clockwise)

Preceding gene: 209548764

Following gene: 209548769

Centisome position: 25.89

GC content: 55.64

Gene sequence:

>1515_bases
ATGGGATTCTGCTACGCCATTACTTTATGGCCGCTCAGTATTGTTTGTAAGTTTCTATGGGCGCTTAGCGTCTCAATCAT
CGTAAACATGTGGGGAGCGGTGCAATTCCCTCTTGCTGCTTGGCGGAAATACAAGAATCCGCCTCAACCTACCCATGGGA
ACGCGAAGTACGAAGACGACAAGAGCCTGCGAAAGCGTGGCTATCTCGGCAACCACGGCTTCCTCGCATGTGTCACCGAC
AAGGGCCGAAAGGTTTTCACCAGTCCCGAGCGCACGGTGGTCATGCTGGCGCCTCCGGGCTCCGGCAAATCCCAGCACTT
TCTTGCCGATCTGAGGGCGAAGATGAAACGCCCGGACGATAAGCTTCCGCACCTCATCATCGGGGATGCAGCGGACGAGC
TTTACCAGAATTCTGCGAAGGATCTTGCGGCAAGGGGCTACCAGATATTCAAGATTGACTTGGTCGAACCGGAAGCATGG
TCAAAGTACGATGTTCTCTCCGGGCTTGACCCCTCCGTCACGGCGGAGGTTCTTTTTGGACGGCAGTTGGATGCCATTTG
CAGATTGTTCGTCCCTGACGAGCCCCACAGCAAGCAGCCGCACTTCTACGAATTCGCCCGCCTGATGGTGAAGTGCGCTA
TCACGATCAACGTGAAATATGAGGGCAACAACAAGCCGATCGGGGACATTCTCTCCGAGCTGATCGACGAAGACGGGCGG
GACGAGATGATTAAGCGGTCGAAGAAGTATGGCGATCCCATCGTGACCTCGACGCTGAAGGTGATGGCGAAGATGCAGGA
CAAGCCGGAGGGGCTTTCCATGATGTCCACATCCCTTCGAAAGCTGGAAGGCTGGCTTGATCCGGCTATCCGGGAAATTA
CCGCCTTCGGAGAAGACATTCACGGCAAATACAGTCGTGGCTGGCGGTTTGAGCAGATGCTGATGCACGACAAGCCTGTT
GCCCTGTTCATTCACAGTGGCACGAACGAGACAGCGGCGGGGCCGATGGTTCGGCTGATCTACGGCAACGCCATCAATGC
GGTTTCAACGCTTCTCGATACCGGCAAGGCGATGCCGCGAGATCTGGAGGTGATGGTGGATGAAGCCGGTCTTGCAGGCA
ACTGCGCTGCGATTTCGCACGCCTATAACCGACTGCGTAAGGCGGGTGTCCGTATCCGCATGTGTTTCCTCGGCTTAACG
GAATTCAAGGAGACGTATCCCAACGCTATGAAAATCCTGGCGGGCAGTGACTTGGTGGTCTTCGGTGGGTCTAATGAGCA
GGATCTAAACCAATATGCCAGCGACCTTGCGGGCGAATACACAGTGCACAGTAAGAGCGAGAGCGAAAGCAGCAGCGGTG
AGAGCAGGGGGAGGTCTGAGCAGCCACGACGCCTCATCAAGCCATCGGAGGTCCGTGGGCTTGCTTACGATAAGGCGCTC
GTCTTCATCGATAACCTTGTGGTCCTGGGCAAGAAGCCGTGGAGGAAAGGGAAGAACGGTATCGAGTTCCTATAA

Upstream 100 bases:

>100_bases
TGAGCCTCGCAAGAGGCCGCAAAGGATCATCTAGCCAAAGGTATCCCTCGGGCCTGCGAAAAGTGTGAAGATTATCGGCT
AGATGTGAGAAGGTTACGTC

Downstream 100 bases:

>100_bases
GCTCATGCCCCCGTCTTCCGACAGGCTCTCGTCCAGCAACTGAACCTCAGCATCATAGCCGGCCTCAAGCAAGAAGGTGC
GATACTCGTCAACGGTGATC

Product: type IV secretory pathway VirD4 protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MGFCYAITLWPLSIVCKFLWALSVSIIVNMWGAVQFPLAAWRKYKNPPQPTHGNAKYEDDKSLRKRGYLGNHGFLACVTD
KGRKVFTSPERTVVMLAPPGSGKSQHFLADLRAKMKRPDDKLPHLIIGDAADELYQNSAKDLAARGYQIFKIDLVEPEAW
SKYDVLSGLDPSVTAEVLFGRQLDAICRLFVPDEPHSKQPHFYEFARLMVKCAITINVKYEGNNKPIGDILSELIDEDGR
DEMIKRSKKYGDPIVTSTLKVMAKMQDKPEGLSMMSTSLRKLEGWLDPAIREITAFGEDIHGKYSRGWRFEQMLMHDKPV
ALFIHSGTNETAAGPMVRLIYGNAINAVSTLLDTGKAMPRDLEVMVDEAGLAGNCAAISHAYNRLRKAGVRIRMCFLGLT
EFKETYPNAMKILAGSDLVVFGGSNEQDLNQYASDLAGEYTVHSKSESESSSGESRGRSEQPRRLIKPSEVRGLAYDKAL
VFIDNLVVLGKKPWRKGKNGIEFL

Sequences:

>Translated_504_residues
MGFCYAITLWPLSIVCKFLWALSVSIIVNMWGAVQFPLAAWRKYKNPPQPTHGNAKYEDDKSLRKRGYLGNHGFLACVTD
KGRKVFTSPERTVVMLAPPGSGKSQHFLADLRAKMKRPDDKLPHLIIGDAADELYQNSAKDLAARGYQIFKIDLVEPEAW
SKYDVLSGLDPSVTAEVLFGRQLDAICRLFVPDEPHSKQPHFYEFARLMVKCAITINVKYEGNNKPIGDILSELIDEDGR
DEMIKRSKKYGDPIVTSTLKVMAKMQDKPEGLSMMSTSLRKLEGWLDPAIREITAFGEDIHGKYSRGWRFEQMLMHDKPV
ALFIHSGTNETAAGPMVRLIYGNAINAVSTLLDTGKAMPRDLEVMVDEAGLAGNCAAISHAYNRLRKAGVRIRMCFLGLT
EFKETYPNAMKILAGSDLVVFGGSNEQDLNQYASDLAGEYTVHSKSESESSSGESRGRSEQPRRLIKPSEVRGLAYDKAL
VFIDNLVVLGKKPWRKGKNGIEFL
>Mature_503_residues
GFCYAITLWPLSIVCKFLWALSVSIIVNMWGAVQFPLAAWRKYKNPPQPTHGNAKYEDDKSLRKRGYLGNHGFLACVTDK
GRKVFTSPERTVVMLAPPGSGKSQHFLADLRAKMKRPDDKLPHLIIGDAADELYQNSAKDLAARGYQIFKIDLVEPEAWS
KYDVLSGLDPSVTAEVLFGRQLDAICRLFVPDEPHSKQPHFYEFARLMVKCAITINVKYEGNNKPIGDILSELIDEDGRD
EMIKRSKKYGDPIVTSTLKVMAKMQDKPEGLSMMSTSLRKLEGWLDPAIREITAFGEDIHGKYSRGWRFEQMLMHDKPVA
LFIHSGTNETAAGPMVRLIYGNAINAVSTLLDTGKAMPRDLEVMVDEAGLAGNCAAISHAYNRLRKAGVRIRMCFLGLTE
FKETYPNAMKILAGSDLVVFGGSNEQDLNQYASDLAGEYTVHSKSESESSSGESRGRSEQPRRLIKPSEVRGLAYDKALV
FIDNLVVLGKKPWRKGKNGIEFL

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56290; Mature: 56158

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFCYAITLWPLSIVCKFLWALSVSIIVNMWGAVQFPLAAWRKYKNPPQPTHGNAKYEDD
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
KSLRKRGYLGNHGFLACVTDKGRKVFTSPERTVVMLAPPGSGKSQHFLADLRAKMKRPDD
HHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
KLPHLIIGDAADELYQNSAKDLAARGYQIFKIDLVEPEAWSKYDVLSGLDPSVTAEVLFG
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCHHHHHHHC
RQLDAICRLFVPDEPHSKQPHFYEFARLMVKCAITINVKYEGNNKPIGDILSELIDEDGR
CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCH
DEMIKRSKKYGDPIVTSTLKVMAKMQDKPEGLSMMSTSLRKLEGWLDPAIREITAFGEDI
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCHHH
HGKYSRGWRFEQMLMHDKPVALFIHSGTNETAAGPMVRLIYGNAINAVSTLLDTGKAMPR
CCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCC
DLEVMVDEAGLAGNCAAISHAYNRLRKAGVRIRMCFLGLTEFKETYPNAMKILAGSDLVV
CHHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHEEEECCCEEE
FGGSNEQDLNQYASDLAGEYTVHSKSESESSSGESRGRSEQPRRLIKPSEVRGLAYDKAL
ECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCHHHHHHH
VFIDNLVVLGKKPWRKGKNGIEFL
HHHHCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFCYAITLWPLSIVCKFLWALSVSIIVNMWGAVQFPLAAWRKYKNPPQPTHGNAKYEDD
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
KSLRKRGYLGNHGFLACVTDKGRKVFTSPERTVVMLAPPGSGKSQHFLADLRAKMKRPDD
HHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
KLPHLIIGDAADELYQNSAKDLAARGYQIFKIDLVEPEAWSKYDVLSGLDPSVTAEVLFG
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCHHHHHHHC
RQLDAICRLFVPDEPHSKQPHFYEFARLMVKCAITINVKYEGNNKPIGDILSELIDEDGR
CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHCCCCH
DEMIKRSKKYGDPIVTSTLKVMAKMQDKPEGLSMMSTSLRKLEGWLDPAIREITAFGEDI
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCHHH
HGKYSRGWRFEQMLMHDKPVALFIHSGTNETAAGPMVRLIYGNAINAVSTLLDTGKAMPR
CCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCC
DLEVMVDEAGLAGNCAAISHAYNRLRKAGVRIRMCFLGLTEFKETYPNAMKILAGSDLVV
CHHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHEEEECCCEEE
FGGSNEQDLNQYASDLAGEYTVHSKSESESSSGESRGRSEQPRRLIKPSEVRGLAYDKAL
ECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHCCHHHHHHH
VFIDNLVVLGKKPWRKGKNGIEFL
HHHHCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA