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The map label for this gene is 209548746

Identifier: 209548746

GI number: 209548746

Start: 1154297

End: 1155571

Strand: Direct

Name: 209548746

Synonym: Rleg2_1143

Alternate gene names: NA

Gene position: 1154297-1155571 (Clockwise)

Preceding gene: 209548745

Following gene: 209548747

Centisome position: 25.44

GC content: 54.75

Gene sequence:

>1275_bases
GTGAACCAAATCCAGATACCGGAGAAGTTCGCGCCATTTCTGGAGCCTCACCGCTATAAGACCGCATACGGGGGGCGTGG
CGGTGCCAAGAGCCATACCATTGGCGGCTTACTCGTCCACATCGCTGCACGTCAACCTGAGTTCATCGTGTGCGGGCGCG
AGTTTCAAAACAGTATAGAGGACAGCGTTTACCGTCTGCTGGAAAATACCATCAAGAAGGATGGTTTGACGGACTACAAG
TTTACGAAGACCAGCATCGAAAACACACGCACCGGTTCGGAGTTCGTGTTTAAAGGGCTGTCGAAGCTGGATGGCGTCAG
CATCAAGTCCCTTGAAGGAGCGACGAAGCTCTGGATTGAGGAAGGCCAGAACATCACCAACGGCACCCTCAATAACGTGA
TCCCCACGATTCGTACTGAAGGCTCTGAAATCTGGACTAGCTTCAACCCCTCGGTCATTGAAGCGCCCGTGTGGCAACGC
CTGGTCGTCAAGCCGCCACCGGATAGCGTGGTCGTCAAGGTAAATCATAACGATAACCCGTGGTTTCCAAAGGTGCTGGA
AGAAGAACGACGCCACCATTTCGTCACGATGGATAGGGCGACCTATGACAACATCTGGGAAGGCGTACCAATGGCCTTCA
CGGCGGGCGCCATCTTCCGCGAAGAGATGGCCGCGATGGAAAAGCAGGGGCGTATTGGCAAGGTACCGCATGATCCAACT
AAGCCCGTCATAGCCGTGTTTGACATGGGTCACGCTGCCAGCGGAAAAGGCGACCCACATGCTATAACGTTCGTGCAGCA
GGGCAACGGCACTGCGGTCAACGCGATTGGCTATTGGGAGGGCAACAACAAGCCTCTTCCCACTGTAGTTCAGGAAGAGC
TGATTGGGCGTCCGTACACCATCAGCAAGGTGGTGATGCCGCACGATGCGAACCGCACGAACTCTCACACCGGCAAGACG
GACGTAGAAATAGTGGAGGGCTTCGGATTCACGGTGGAGATGCTTGAACGCACCAACGACCTAGACCGGGATGTAAACAA
CCTACGCACCGTCCTGCCGCTCATGTTTATTGATGAAGAAAATTGCCAAGGGCTGCTAGCTTGCTTGCGTAATCACCGCA
GGGAGAAGGACGAGAAGACGGGGTTATGGCGCTTCAAACATGACTGGACGAGTCATGGCGTATCCTCGGCACGGTACTTG
GCGGTCTATTACAATATCCATGGGGGACTTGGATATTACGAGTCGGTTGATGATGAGCGCCGCTCCGCGTGGTAG

Upstream 100 bases:

>100_bases
CGACAGAGACAACGCGCGTGCAAGGGGATGAAGACAACCCACTACAGGTATCCAGTAAGCTTACTGTGGAGCTGGTAAGG
CCCAAGGAAAGCGCCGATGC

Downstream 100 bases:

>100_bases
GGCTTGCTTAGAGTTGCAATAGATGATTAGATTGCAACTGTAAGGAAAGTTCAAGGCATGTCTCCCGACACGACCAGTAC
CACAACTCCCAAAGCCAAAC

Product: phage terminase, large subunit, PBSX family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNQIQIPEKFAPFLEPHRYKTAYGGRGGAKSHTIGGLLVHIAARQPEFIVCGREFQNSIEDSVYRLLENTIKKDGLTDYK
FTKTSIENTRTGSEFVFKGLSKLDGVSIKSLEGATKLWIEEGQNITNGTLNNVIPTIRTEGSEIWTSFNPSVIEAPVWQR
LVVKPPPDSVVVKVNHNDNPWFPKVLEEERRHHFVTMDRATYDNIWEGVPMAFTAGAIFREEMAAMEKQGRIGKVPHDPT
KPVIAVFDMGHAASGKGDPHAITFVQQGNGTAVNAIGYWEGNNKPLPTVVQEELIGRPYTISKVVMPHDANRTNSHTGKT
DVEIVEGFGFTVEMLERTNDLDRDVNNLRTVLPLMFIDEENCQGLLACLRNHRREKDEKTGLWRFKHDWTSHGVSSARYL
AVYYNIHGGLGYYESVDDERRSAW

Sequences:

>Translated_424_residues
MNQIQIPEKFAPFLEPHRYKTAYGGRGGAKSHTIGGLLVHIAARQPEFIVCGREFQNSIEDSVYRLLENTIKKDGLTDYK
FTKTSIENTRTGSEFVFKGLSKLDGVSIKSLEGATKLWIEEGQNITNGTLNNVIPTIRTEGSEIWTSFNPSVIEAPVWQR
LVVKPPPDSVVVKVNHNDNPWFPKVLEEERRHHFVTMDRATYDNIWEGVPMAFTAGAIFREEMAAMEKQGRIGKVPHDPT
KPVIAVFDMGHAASGKGDPHAITFVQQGNGTAVNAIGYWEGNNKPLPTVVQEELIGRPYTISKVVMPHDANRTNSHTGKT
DVEIVEGFGFTVEMLERTNDLDRDVNNLRTVLPLMFIDEENCQGLLACLRNHRREKDEKTGLWRFKHDWTSHGVSSARYL
AVYYNIHGGLGYYESVDDERRSAW
>Mature_424_residues
MNQIQIPEKFAPFLEPHRYKTAYGGRGGAKSHTIGGLLVHIAARQPEFIVCGREFQNSIEDSVYRLLENTIKKDGLTDYK
FTKTSIENTRTGSEFVFKGLSKLDGVSIKSLEGATKLWIEEGQNITNGTLNNVIPTIRTEGSEIWTSFNPSVIEAPVWQR
LVVKPPPDSVVVKVNHNDNPWFPKVLEEERRHHFVTMDRATYDNIWEGVPMAFTAGAIFREEMAAMEKQGRIGKVPHDPT
KPVIAVFDMGHAASGKGDPHAITFVQQGNGTAVNAIGYWEGNNKPLPTVVQEELIGRPYTISKVVMPHDANRTNSHTGKT
DVEIVEGFGFTVEMLERTNDLDRDVNNLRTVLPLMFIDEENCQGLLACLRNHRREKDEKTGLWRFKHDWTSHGVSSARYL
AVYYNIHGGLGYYESVDDERRSAW

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 47825; Mature: 47825

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIQIPEKFAPFLEPHRYKTAYGGRGGAKSHTIGGLLVHIAARQPEFIVCGREFQNSIE
CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECHHHHHHHH
DSVYRLLENTIKKDGLTDYKFTKTSIENTRTGSEFVFKGLSKLDGVSIKSLEGATKLWIE
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHH
EGQNITNGTLNNVIPTIRTEGSEIWTSFNPSVIEAPVWQRLVVKPPPDSVVVKVNHNDNP
CCCCCCCCCHHHCCCCEECCCHHHEECCCCCCEECCCHHEEEECCCCCCEEEEEECCCCC
WFPKVLEEERRHHFVTMDRATYDNIWEGVPMAFTAGAIFREEMAAMEKQGRIGKVPHDPT
CCHHHHHHHHHCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPVIAVFDMGHAASGKGDPHAITFVQQGNGTAVNAIGYWEGNNKPLPTVVQEELIGRPYT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCE
ISKVVMPHDANRTNSHTGKTDVEIVEGFGFTVEMLERTNDLDRDVNNLRTVLPLMFIDEE
EEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHEEECCC
NCQGLLACLRNHRREKDEKTGLWRFKHDWTSHGVSSARYLAVYYNIHGGLGYYESVDDER
CHHHHHHHHHHHHHCCHHHCCCEEEECCHHHCCCCCEEEEEEEEEECCCCCCHHCCCCHH
RSAW
HCCC
>Mature Secondary Structure
MNQIQIPEKFAPFLEPHRYKTAYGGRGGAKSHTIGGLLVHIAARQPEFIVCGREFQNSIE
CCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEECHHHHHHHH
DSVYRLLENTIKKDGLTDYKFTKTSIENTRTGSEFVFKGLSKLDGVSIKSLEGATKLWIE
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHH
EGQNITNGTLNNVIPTIRTEGSEIWTSFNPSVIEAPVWQRLVVKPPPDSVVVKVNHNDNP
CCCCCCCCCHHHCCCCEECCCHHHEECCCCCCEECCCHHEEEECCCCCCEEEEEECCCCC
WFPKVLEEERRHHFVTMDRATYDNIWEGVPMAFTAGAIFREEMAAMEKQGRIGKVPHDPT
CCHHHHHHHHHCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPVIAVFDMGHAASGKGDPHAITFVQQGNGTAVNAIGYWEGNNKPLPTVVQEELIGRPYT
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCE
ISKVVMPHDANRTNSHTGKTDVEIVEGFGFTVEMLERTNDLDRDVNNLRTVLPLMFIDEE
EEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHEEECCC
NCQGLLACLRNHRREKDEKTGLWRFKHDWTSHGVSSARYLAVYYNIHGGLGYYESVDDER
CHHHHHHHHHHHHHCCHHHCCCEEEECCHHHCCCCCEEEEEEEEEECCCCCCHHCCCCHH
RSAW
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]