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The map label for this gene is cvpA [H]

Identifier: 209548646

GI number: 209548646

Start: 1061918

End: 1062538

Strand: Reverse

Name: cvpA [H]

Synonym: Rleg2_1043

Alternate gene names: 209548646

Gene position: 1062538-1061918 (Counterclockwise)

Preceding gene: 209548647

Following gene: 209548645

Centisome position: 23.41

GC content: 62.48

Gene sequence:

>621_bases
ATGCCCATTACGATTTTCGACGGTATTGTCATCGGCGTCGTGCTCTTCTCCGCCGTGCTGGCGATGGTCCGCGGCTTTTC
GCGAGAGATCCTCTCGATCGCAAGCTGGGGCGGTTCGGCGGCGGCGGCCTATTACCTCTATCCCTACCTGCTGCCCTATG
CGAAGAAATACACCGATGACGACCGCATCGCGATCGTCGGTTCGGCAGCGGTCGTTTTCCTGATCGCGCTCATCGTCATC
TCCTTCATCACCATGAAGATCGCCGATTTCATCATCGACAGCCGCGTCGGCGCGCTAGACCGCACGCTCGGCTTCCTGTT
CGGGGCAGCGCGCGGCGTACTGCTGCTGGTCGTCGCCGTCGCCTTCTGGAACTGGCTGGTCGATGTCGACCACCGCCCGG
CATGGGTCAACGAAGCGAAGTCGAAGCCCTTCCTGGATTCGATGGTCGTGAAGCTGAAATCGGTTCTGCCGGAGCAATTT
GCCCAGATGATACCGGCGAGCATCCGTGATAAGCTTCAGCCGCCGGCACAGGGCGGCGCTGAAGGCCCCAATCCGCCGAC
CGGCGACCAGGCGCCGGCGGAAGACGCACCGACAGCGCCAGCACAGCAGCCGGCGAATTGA

Upstream 100 bases:

>100_bases
CGAGGTTTGATCCTTTCATTGCCAAGATTGGTGGTGATATAGGAGGCACACGATAAGGCACGACACGGCCGCCCGGCGGC
AGTCCTGGAGTTGAATTTAC

Downstream 100 bases:

>100_bases
CACAGTGTTCAAGAGCTTGACCCGCCCTCCGGCAATTGCCATTTGAGCGGGACGAAATGAGGGGTCCGGCCGGGCATTCC
AGCTCTGTCGGGCTTCAGCT

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MPITIFDGIVIGVVLFSAVLAMVRGFSREILSIASWGGSAAAAYYLYPYLLPYAKKYTDDDRIAIVGSAAVVFLIALIVI
SFITMKIADFIIDSRVGALDRTLGFLFGAARGVLLLVVAVAFWNWLVDVDHRPAWVNEAKSKPFLDSMVVKLKSVLPEQF
AQMIPASIRDKLQPPAQGGAEGPNPPTGDQAPAEDAPTAPAQQPAN

Sequences:

>Translated_206_residues
MPITIFDGIVIGVVLFSAVLAMVRGFSREILSIASWGGSAAAAYYLYPYLLPYAKKYTDDDRIAIVGSAAVVFLIALIVI
SFITMKIADFIIDSRVGALDRTLGFLFGAARGVLLLVVAVAFWNWLVDVDHRPAWVNEAKSKPFLDSMVVKLKSVLPEQF
AQMIPASIRDKLQPPAQGGAEGPNPPTGDQAPAEDAPTAPAQQPAN
>Mature_205_residues
PITIFDGIVIGVVLFSAVLAMVRGFSREILSIASWGGSAAAAYYLYPYLLPYAKKYTDDDRIAIVGSAAVVFLIALIVIS
FITMKIADFIIDSRVGALDRTLGFLFGAARGVLLLVVAVAFWNWLVDVDHRPAWVNEAKSKPFLDSMVVKLKSVLPEQFA
QMIPASIRDKLQPPAQGGAEGPNPPTGDQAPAEDAPTAPAQQPAN

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=132, Percent_Identity=32.5757575757576, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 22117; Mature: 21986

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITIFDGIVIGVVLFSAVLAMVRGFSREILSIASWGGSAAAAYYLYPYLLPYAKKYTDD
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
DRIAIVGSAAVVFLIALIVISFITMKIADFIIDSRVGALDRTLGFLFGAARGVLLLVVAV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWNWLVDVDHRPAWVNEAKSKPFLDSMVVKLKSVLPEQFAQMIPASIRDKLQPPAQGGA
HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
EGPNPPTGDQAPAEDAPTAPAQQPAN
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PITIFDGIVIGVVLFSAVLAMVRGFSREILSIASWGGSAAAAYYLYPYLLPYAKKYTDD
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
DRIAIVGSAAVVFLIALIVISFITMKIADFIIDSRVGALDRTLGFLFGAARGVLLLVVAV
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWNWLVDVDHRPAWVNEAKSKPFLDSMVVKLKSVLPEQFAQMIPASIRDKLQPPAQGGA
HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
EGPNPPTGDQAPAEDAPTAPAQQPAN
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]