| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548628
Identifier: 209548628
GI number: 209548628
Start: 1045262
End: 1045885
Strand: Direct
Name: 209548628
Synonym: Rleg2_1025
Alternate gene names: NA
Gene position: 1045262-1045885 (Clockwise)
Preceding gene: 209548622
Following gene: 209548630
Centisome position: 23.03
GC content: 60.74
Gene sequence:
>624_bases ATGACCGAACAATCTGTATCGATTCGATCCATCTGCGTTTACTGCGGCTCAAGGCCGGGACGCGATCCCTCCCACATGGC GGCCGGGCGTGCTCTCGGACGAGAGATCGCCGAATACGGCCTGCGCCTCGTCTATGGCGGGGGTACCAAAGGCATCATGG GCGCGGTAGCCAGCGGCGCGCTTTCAGGCGGCGGTCAGGTCACGGGCATTATCCCCGAATTCCTGATCGATATGGAAGCG ACTCGCCACTCGCTCGGTCAGCTTAACGAACTTATTGTAACCCCTGACATGCATGCGCGCAAACATACGATGTTCGAGCG TTCCGACGCTTTCGTCGCACTGCCCGGCGGCATCGGTACGCTGGAGGAGATCGTCGAGATCATGACCTGGGCGCAGCTCG GCCGCCACGAAAAGCCGATGGTCTTTGCCAACGTCAACGGTTTCTGGGATCCGATGATGGAGCTGATGCGCCATATGACC GAAGAGGGTTTCCTGCACACTGCCCACCGGGTGCAGCCGCTCGTCGTCGATGAGATCTCCGGCATCATTCCGGCAATCAT GGCCCAGGCAGCCCAGCTCGCCGCCGATCGTGACGGCGAGGATGCGGTGATCTCGAAGATGTAG
Upstream 100 bases:
>100_bases GTTGCTTTGCACAAGCATTCAAAGCAATTCGGCAAGCTCGGCAGGCTGCTTTCCAGTCAATTTTCTTGACTGCATTGAAA TGGAATAGTTGTTTGCCTCT
Downstream 100 bases:
>100_bases GTGGCGTAGCAGCCCCCGGAGCGCCCGCCGTTTCGCCGGCAAATTCAGCTATAGGCCGAAACAAGCTGCGTCACCTGAGA ACGCATCCATCGGTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTEQSVSIRSICVYCGSRPGRDPSHMAAGRALGREIAEYGLRLVYGGGTKGIMGAVASGALSGGGQVTGIIPEFLIDMEA TRHSLGQLNELIVTPDMHARKHTMFERSDAFVALPGGIGTLEEIVEIMTWAQLGRHEKPMVFANVNGFWDPMMELMRHMT EEGFLHTAHRVQPLVVDEISGIIPAIMAQAAQLAADRDGEDAVISKM
Sequences:
>Translated_207_residues MTEQSVSIRSICVYCGSRPGRDPSHMAAGRALGREIAEYGLRLVYGGGTKGIMGAVASGALSGGGQVTGIIPEFLIDMEA TRHSLGQLNELIVTPDMHARKHTMFERSDAFVALPGGIGTLEEIVEIMTWAQLGRHEKPMVFANVNGFWDPMMELMRHMT EEGFLHTAHRVQPLVVDEISGIIPAIMAQAAQLAADRDGEDAVISKM >Mature_206_residues TEQSVSIRSICVYCGSRPGRDPSHMAAGRALGREIAEYGLRLVYGGGTKGIMGAVASGALSGGGQVTGIIPEFLIDMEAT RHSLGQLNELIVTPDMHARKHTMFERSDAFVALPGGIGTLEEIVEIMTWAQLGRHEKPMVFANVNGFWDPMMELMRHMTE EGFLHTAHRVQPLVVDEISGIIPAIMAQAAQLAADRDGEDAVISKM
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=180, Percent_Identity=40, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 22388; Mature: 22257
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSVSIRSICVYCGSRPGRDPSHMAAGRALGREIAEYGLRLVYGGGTKGIMGAVASGA CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHC LSGGGQVTGIIPEFLIDMEATRHSLGQLNELIVTPDMHARKHTMFERSDAFVALPGGIGT CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCEEECCCCCCC LEEIVEIMTWAQLGRHEKPMVFANVNGFWDPMMELMRHMTEEGFLHTAHRVQPLVVDEIS HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH GIIPAIMAQAAQLAADRDGEDAVISKM HHHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure TEQSVSIRSICVYCGSRPGRDPSHMAAGRALGREIAEYGLRLVYGGGTKGIMGAVASGA CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHC LSGGGQVTGIIPEFLIDMEATRHSLGQLNELIVTPDMHARKHTMFERSDAFVALPGGIGT CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCEEECCCCCCC LEEIVEIMTWAQLGRHEKPMVFANVNGFWDPMMELMRHMTEEGFLHTAHRVQPLVVDEIS HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH GIIPAIMAQAAQLAADRDGEDAVISKM HHHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]