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The map label for this gene is psd [H]

Identifier: 209548625

GI number: 209548625

Start: 1040155

End: 1040853

Strand: Reverse

Name: psd [H]

Synonym: Rleg2_1022

Alternate gene names: 209548625

Gene position: 1040853-1040155 (Counterclockwise)

Preceding gene: 209548626

Following gene: 209548624

Centisome position: 22.94

GC content: 63.95

Gene sequence:

>699_bases
ATGAGCCTGTTCAACACGGTTCGCAAAACGATCGTCCCCGTGCATAAGGAGGGTTATCCCTTCGTTGCCGCCTTCTTCGT
CGCGTCGCTGATCCTGGGCTGGATCTTCAAGCCGCTCTTCTGGATCGGCATGATCTTCACGCTGTGGTGCGCCTATTTCT
TCCGTGATCCCGAGCGCGTCACCCCGCAGGACGACGATCTGGTGATCTCTCCGGCCGACGGCAAGGTCTCGGCGATCCAG
ATGGTGACCCCGCCGGCCGAGCTCGACCTCGGCTCCGAGCCGATGCTGCGCATCTCGGTGTTCATGAACGTCTTCAACTG
CCATGTGAACCGGGCGCCGATGCGCGGGCGCATCGTCAGCATCAATTACCGCTCCGGCAGCTTCGTCAATGCCGAACTCG
ACAAGGCCAGCGAGGACAATGAGCGCAACGGGCTGGTGATCGAAACCCGCCACGGCCAGATCGGCGTCGTCCAGATCGCC
GGCCTCGTGGCGCGGCGCATCCTCTGCTGGGCAAACCCCAACGAACCGGTGGATGCCGGCGAGCGCTTCGGGCTGATCCG
TTTCGGCTCGCGGCTCGACGTGTTCCTGCCCGCCGGTGCCGCGCCACGCGTCTCGCTCGGCCAGGTGGCGATTGCCGGGG
AAACTGTGATTGCCGAATTCGCCTCCACCAAGGGTCCCATCATCAGCCGCCGCAGCTAA

Upstream 100 bases:

>100_bases
CAGAACTCCGGCGTCGGAACCACGTCCGGGGCCACAGCATTGCCCCGGAGACGGTTTTTCGCTAACCAGCAAAAAACGAC
AACGCAAGGAGACCGGCAGC

Downstream 100 bases:

>100_bases
GGCGCGTGGCGATCTTGCAGATTCGCTGCTCGCGCTTTAGCCCTTTGTTTTTACGCATGTCGTTATCGCAAAACCGCTGC
ACAGTTTTGCGCGACATGCT

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSLFNTVRKTIVPVHKEGYPFVAAFFVASLILGWIFKPLFWIGMIFTLWCAYFFRDPERVTPQDDDLVISPADGKVSAIQ
MVTPPAELDLGSEPMLRISVFMNVFNCHVNRAPMRGRIVSINYRSGSFVNAELDKASEDNERNGLVIETRHGQIGVVQIA
GLVARRILCWANPNEPVDAGERFGLIRFGSRLDVFLPAGAAPRVSLGQVAIAGETVIAEFASTKGPIISRRS

Sequences:

>Translated_232_residues
MSLFNTVRKTIVPVHKEGYPFVAAFFVASLILGWIFKPLFWIGMIFTLWCAYFFRDPERVTPQDDDLVISPADGKVSAIQ
MVTPPAELDLGSEPMLRISVFMNVFNCHVNRAPMRGRIVSINYRSGSFVNAELDKASEDNERNGLVIETRHGQIGVVQIA
GLVARRILCWANPNEPVDAGERFGLIRFGSRLDVFLPAGAAPRVSLGQVAIAGETVIAEFASTKGPIISRRS
>Mature_231_residues
SLFNTVRKTIVPVHKEGYPFVAAFFVASLILGWIFKPLFWIGMIFTLWCAYFFRDPERVTPQDDDLVISPADGKVSAIQM
VTPPAELDLGSEPMLRISVFMNVFNCHVNRAPMRGRIVSINYRSGSFVNAELDKASEDNERNGLVIETRHGQIGVVQIAG
LVARRILCWANPNEPVDAGERFGLIRFGSRLDVFLPAGAAPRVSLGQVAIAGETVIAEFASTKGPIISRRS

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 25623; Mature: 25492

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFNTVRKTIVPVHKEGYPFVAAFFVASLILGWIFKPLFWIGMIFTLWCAYFFRDPERV
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPQDDDLVISPADGKVSAIQMVTPPAELDLGSEPMLRISVFMNVFNCHVNRAPMRGRIVS
CCCCCCEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
INYRSGSFVNAELDKASEDNERNGLVIETRHGQIGVVQIAGLVARRILCWANPNEPVDAG
EEECCCCEEEEECCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHEEECCCCCCCCCC
ERFGLIRFGSRLDVFLPAGAAPRVSLGQVAIAGETVIAEFASTKGPIISRRS
HHEEEEEECCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
SLFNTVRKTIVPVHKEGYPFVAAFFVASLILGWIFKPLFWIGMIFTLWCAYFFRDPERV
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPQDDDLVISPADGKVSAIQMVTPPAELDLGSEPMLRISVFMNVFNCHVNRAPMRGRIVS
CCCCCCEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
INYRSGSFVNAELDKASEDNERNGLVIETRHGQIGVVQIAGLVARRILCWANPNEPVDAG
EEECCCCEEEEECCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHEEECCCCCCCCCC
ERFGLIRFGSRLDVFLPAGAAPRVSLGQVAIAGETVIAEFASTKGPIISRRS
HHEEEEEECCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA