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The map label for this gene is yoqW [H]

Identifier: 209548622

GI number: 209548622

Start: 1037852

End: 1038616

Strand: Direct

Name: yoqW [H]

Synonym: Rleg2_1019

Alternate gene names: 209548622

Gene position: 1037852-1038616 (Clockwise)

Preceding gene: 209548621

Following gene: 209548628

Centisome position: 22.87

GC content: 63.14

Gene sequence:

>765_bases
ATGTGTGGACGTTTCGCCCTGACAAGCTCCAGCGCCGACCTGCGCGAATTTTTCTCCGGTGTCGATCTCGATGAGTTTCC
GGCGCGCTACAACATCGCGCCGACGCAGCCGATCCTCGTCGTCATAGCCGGCGAGGGCCGGGAGCAGGGCAGCAACCTGG
CCGACCGTCGAGCCGTGCTCGTGCGCTGGGGTCTCACTCCGGCTTGGGTCAAGGACCCGAGGGACTTCCCGCTGTTGATC
AACGCCCGCTCCGAAACCGCGATCGGCAAGGCCTCCTTCCGGGCGGCCATGCGTCATCGCCGCATACTCATCCCGGCCTC
CGGCTTTTATGAATGGCATCGCCCGTCCAAAGAAAGCGGAGAGCGGCCGCAGGCCTATTGGGTCAGGCCGCGTCAGGGCG
GGGTCGTCGCTTTTGCCGGGCTGATGGAGACATGGTCCTCGGCTGATGGTTCCGAGGTCGATACCGGCGCGATCCTGACA
ACAACGGCCAATTCGGGCATATCGGCGATCCACGATCGCATGCCCGTCATTATCAAGCCTGAGGATTTTTCGCGCTGGCT
GGATTGCAAGACGCAGGAACCGCGCGAGGTGGCCGACCTGATGCGGCCGGTTCAGGACGATTTTTTCGAGGCCGTCCCGG
TCTCCGACAAAGTCAACAAGGTCGCCAATATGGGGCCCGACCTGCAGCAGCCGGTCGTCGTCGAAAAGCCGCTGAAGGCC
CCCGAGAAGCAGAGGCCTGACGACGGCCAGCTTAGTTTCTTCTGA

Upstream 100 bases:

>100_bases
GCGGGGCGCTGGTCTGCCTTGCGGGAACGAGCATTATCCTCTTTGGGCCGAGAGGCTGACGCGCCTTGACCGGACTCAAG
CCGGGTGCAAAGACAAGCCG

Downstream 100 bases:

>100_bases
ATACTATCTGCCGCTTTTCGTTGGTCGCACGGGCGCTCAAGCGGATTTCTTGACGCTGGTCGGCTTGTGTTTCGCCATCA
GCGATGCCGCGGCAACAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MCGRFALTSSSADLREFFSGVDLDEFPARYNIAPTQPILVVIAGEGREQGSNLADRRAVLVRWGLTPAWVKDPRDFPLLI
NARSETAIGKASFRAAMRHRRILIPASGFYEWHRPSKESGERPQAYWVRPRQGGVVAFAGLMETWSSADGSEVDTGAILT
TTANSGISAIHDRMPVIIKPEDFSRWLDCKTQEPREVADLMRPVQDDFFEAVPVSDKVNKVANMGPDLQQPVVVEKPLKA
PEKQRPDDGQLSFF

Sequences:

>Translated_254_residues
MCGRFALTSSSADLREFFSGVDLDEFPARYNIAPTQPILVVIAGEGREQGSNLADRRAVLVRWGLTPAWVKDPRDFPLLI
NARSETAIGKASFRAAMRHRRILIPASGFYEWHRPSKESGERPQAYWVRPRQGGVVAFAGLMETWSSADGSEVDTGAILT
TTANSGISAIHDRMPVIIKPEDFSRWLDCKTQEPREVADLMRPVQDDFFEAVPVSDKVNKVANMGPDLQQPVVVEKPLKA
PEKQRPDDGQLSFF
>Mature_254_residues
MCGRFALTSSSADLREFFSGVDLDEFPARYNIAPTQPILVVIAGEGREQGSNLADRRAVLVRWGLTPAWVKDPRDFPLLI
NARSETAIGKASFRAAMRHRRILIPASGFYEWHRPSKESGERPQAYWVRPRQGGVVAFAGLMETWSSADGSEVDTGAILT
TTANSGISAIHDRMPVIIKPEDFSRWLDCKTQEPREVADLMRPVQDDFFEAVPVSDKVNKVANMGPDLQQPVVVEKPLKA
PEKQRPDDGQLSFF

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=249, Percent_Identity=29.3172690763052, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI54607104, Length=249, Percent_Identity=29.3172690763052, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI48994894, Length=240, Percent_Identity=31.25, Blast_Score=94, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323761, Length=272, Percent_Identity=26.4705882352941, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21355761, Length=239, Percent_Identity=28.4518828451883, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 28296; Mature: 28296

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFALTSSSADLREFFSGVDLDEFPARYNIAPTQPILVVIAGEGREQGSNLADRRAVL
CCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEEE
VRWGLTPAWVKDPRDFPLLINARSETAIGKASFRAAMRHRRILIPASGFYEWHRPSKESG
EEECCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCCCCC
ERPQAYWVRPRQGGVVAFAGLMETWSSADGSEVDTGAILTTTANSGISAIHDRMPVIIKP
CCCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEECC
EDFSRWLDCKTQEPREVADLMRPVQDDFFEAVPVSDKVNKVANMGPDLQQPVVVEKPLKA
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECCCCC
PEKQRPDDGQLSFF
CCCCCCCCCCEECC
>Mature Secondary Structure
MCGRFALTSSSADLREFFSGVDLDEFPARYNIAPTQPILVVIAGEGREQGSNLADRRAVL
CCCCEEECCCCHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEEE
VRWGLTPAWVKDPRDFPLLINARSETAIGKASFRAAMRHRRILIPASGFYEWHRPSKESG
EEECCCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCEEEEECCCCHHHCCCCCCCC
ERPQAYWVRPRQGGVVAFAGLMETWSSADGSEVDTGAILTTTANSGISAIHDRMPVIIKP
CCCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEECC
EDFSRWLDCKTQEPREVADLMRPVQDDFFEAVPVSDKVNKVANMGPDLQQPVVVEKPLKA
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECCCCC
PEKQRPDDGQLSFF
CCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]