| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is mocC [H]
Identifier: 209548583
GI number: 209548583
Start: 999043
End: 999960
Strand: Reverse
Name: mocC [H]
Synonym: Rleg2_0980
Alternate gene names: 209548583
Gene position: 999960-999043 (Counterclockwise)
Preceding gene: 209548584
Following gene: 209548582
Centisome position: 22.04
GC content: 64.27
Gene sequence:
>918_bases ATGAAGGCCAAACTCGGCATGTCGCCCATCGCCTGGTGGAACGACGATCTTCCTGAACTCAGCGACGACGTGTCCCTCGA GGAATGCCTGCGGCAATCGCGCGGCGCCGGTTTCACCGGCATGGAACAGGGCCGTCGTTTCCCCAGCAATCCCGAGGAAA TGCTGCCGATCCTGCGCGCCGCCGACGTGACGCTCTGCGGCGGCTGGTTCTCCGGCACGCTGGTCAATGAGGAGCTCACG GCCAACAAGGACCGCATCGCTCCGATGATCGAATTGTTCAAGGCGGTCAATGCGCCTTGCATCGTTTACGGCGAGGTCGG CCGCTCCATCCAGGGCGACCGCTCCAAGCCGCTCGCCACCAAACCGCGCCTTGCCGATGACGAGATGAAGGCCTATGCGC GCCGCGTCACGGAATTCGGCGAATGGTGCGCCGAACAGGGCATGCCGCTCTCCTATCACCATCATATGGCCGCCGTTGTC GAAACCGAGCCGGAACTCGACGCCTTCATGCGTTCTTCGGGCGAAGGCATTCCGCTGCTGCTCGATGCCGGCCATCTCGC CTTTGCCGGCGGCGACGTGCTGCGCGCCATCGACCATCACCACGCCCGCATCAACCATGTTCACGTCAAGGACATCCGCA AGTCCGTCGTCGATGGGCTGGACCGCAGCCGGCAGTCCTTCCTCGACGCAGTGGCGCTCGGCGCCTTCACCGTGCCGGGC GACGGCTCGCTCGATTTCGGCGCCATCGTCCTGCGGCTGGCCGATCACGGCTATGAAGGCTGGTTCGTCGTCGAGGCCGA GCAGGATCCGCGCAAGGCGCCGCCGCAGAAAATGGCCGAGATCGGCCACGCGGAATTGATACGGGTGATGACGGCTGCCG GTTATACGGTGGAGACCGAAGGCTTCCCAAAGGGATAA
Upstream 100 bases:
>100_bases ATGTCGAAGCGCGCGCTTCCCAGCGTATCCGCTGATTCGATTGCCATCATTTTCCGGAGGAGCGCCCCACTCCTCCGCAC TATTTTTAAGGAGACTATAG
Downstream 100 bases:
>100_bases CGGAAAGAACCCTGCTGGACTGCTGGAGCAAGACGCCCCCTCATCCGCCGGAAGCCGACCGGGTCGAGCCACGGGTCTCG ACCCGTCCTTCGGCCCCCTC
Product: xylose isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKAKLGMSPIAWWNDDLPELSDDVSLEECLRQSRGAGFTGMEQGRRFPSNPEEMLPILRAADVTLCGGWFSGTLVNEELT ANKDRIAPMIELFKAVNAPCIVYGEVGRSIQGDRSKPLATKPRLADDEMKAYARRVTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRSSGEGIPLLLDAGHLAFAGGDVLRAIDHHHARINHVHVKDIRKSVVDGLDRSRQSFLDAVALGAFTVPG DGSLDFGAIVLRLADHGYEGWFVVEAEQDPRKAPPQKMAEIGHAELIRVMTAAGYTVETEGFPKG
Sequences:
>Translated_305_residues MKAKLGMSPIAWWNDDLPELSDDVSLEECLRQSRGAGFTGMEQGRRFPSNPEEMLPILRAADVTLCGGWFSGTLVNEELT ANKDRIAPMIELFKAVNAPCIVYGEVGRSIQGDRSKPLATKPRLADDEMKAYARRVTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRSSGEGIPLLLDAGHLAFAGGDVLRAIDHHHARINHVHVKDIRKSVVDGLDRSRQSFLDAVALGAFTVPG DGSLDFGAIVLRLADHGYEGWFVVEAEQDPRKAPPQKMAEIGHAELIRVMTAAGYTVETEGFPKG >Mature_305_residues MKAKLGMSPIAWWNDDLPELSDDVSLEECLRQSRGAGFTGMEQGRRFPSNPEEMLPILRAADVTLCGGWFSGTLVNEELT ANKDRIAPMIELFKAVNAPCIVYGEVGRSIQGDRSKPLATKPRLADDEMKAYARRVTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRSSGEGIPLLLDAGHLAFAGGDVLRAIDHHHARINHVHVKDIRKSVVDGLDRSRQSFLDAVALGAFTVPG DGSLDFGAIVLRLADHGYEGWFVVEAEQDPRKAPPQKMAEIGHAELIRVMTAAGYTVETEGFPKG
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33461; Mature: 33461
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKLGMSPIAWWNDDLPELSDDVSLEECLRQSRGAGFTGMEQGRRFPSNPEEMLPILRA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHH ADVTLCGGWFSGTLVNEELTANKDRIAPMIELFKAVNAPCIVYGEVGRSIQGDRSKPLAT CCEEEECCCCCCEEECCHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC KPRLADDEMKAYARRVTEFGEWCAEQGMPLSYHHHMAAVVETEPELDAFMRSSGEGIPLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCHHHHHHHHCCCCCCEEE LDAGHLAFAGGDVLRAIDHHHARINHVHVKDIRKSVVDGLDRSRQSFLDAVALGAFTVPG EECCCEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC DGSLDFGAIVLRLADHGYEGWFVVEAEQDPRKAPPQKMAEIGHAELIRVMTAAGYTVETE CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHCCCEEECC GFPKG CCCCC >Mature Secondary Structure MKAKLGMSPIAWWNDDLPELSDDVSLEECLRQSRGAGFTGMEQGRRFPSNPEEMLPILRA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHH ADVTLCGGWFSGTLVNEELTANKDRIAPMIELFKAVNAPCIVYGEVGRSIQGDRSKPLAT CCEEEECCCCCCEEECCHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC KPRLADDEMKAYARRVTEFGEWCAEQGMPLSYHHHMAAVVETEPELDAFMRSSGEGIPLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCHHHHHHHHCCCCCCEEE LDAGHLAFAGGDVLRAIDHHHARINHVHVKDIRKSVVDGLDRSRQSFLDAVALGAFTVPG EECCCEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC DGSLDFGAIVLRLADHGYEGWFVVEAEQDPRKAPPQKMAEIGHAELIRVMTAAGYTVETE CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHCCCEEECC GFPKG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]