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The map label for this gene is iolB [H]

Identifier: 209548582

GI number: 209548582

Start: 998082

End: 998879

Strand: Reverse

Name: iolB [H]

Synonym: Rleg2_0979

Alternate gene names: 209548582

Gene position: 998879-998082 (Counterclockwise)

Preceding gene: 209548583

Following gene: 209548581

Centisome position: 22.01

GC content: 62.66

Gene sequence:

>798_bases
ATGCCAAACCTCAAGGTGAAACCATCGGGCACGCATGGCCGTGTCACGCATGTCACCCCTGAGAATGCCGGCTGGACCTA
TGTCGGCTTCGATCTGCACCGGCTAGAGCCGGGCGAGACGGTTTCGGGAGAGACCGGAGATCGGGAAATCTGCCTCGTCT
GGGTTACCGGCAAGGGCAAGGCATCGGCCGGAACCAAGGATTTCGGCACGCTCGGCGGCCGCATGAACCCGTTCGAGGGC
GCGCCGCATGCGCTCTACATTCCGATGGAATCGACATGGTCGGTGACGGCGGAGACCGATCTGGAGCTCGCCGTCTGCTC
GGCGCCCGGCGGCGGCACCTATCAGGCGAAAGAAATCCCGCCCGGCACGCATCCGCAGGTGACGCGCGGCAAGGGTACGA
ATGTGCGCTACGTCAACAATATCATGCCGGAGGACGACAGCTCGGCGCATTCGCTGCTCGTCGTCGAGGTGATCACGCCG
GGCGGCCACACCTCCTCCTATCCGCCGCACAAACACGACCAGGACGACCTGCCGAACGAGAGCTTTCTGGAAGAGACCTA
CTATCATCGCCTCAACCCGCCGCAGGGCTTCGGTTTCCAGCGCGTCTACACCGATGATCGCTCGCTCGACGAAGCGATGG
CGATCGAGGATGGTGACGTGACGCTGGTGCCGAAGGGCTACCATCCTTGCGCGGCAACGCACGGCTACGATCTCTACTAC
CTCAACGTCATGGCCGGGCCGAAGCGGATCTGGAAATTCCACAATGCCGTCGAGCACGAATGGCTGATCAAGGCGTGA

Upstream 100 bases:

>100_bases
TCGAGCCACGGGTCTCGACCCGTCCTTCGGCCCCCTCCGGGATAAGGTGGCGGCAGCCGGATGAGGGGGCAACGCCCACC
AACATACGAGGAGAGTACCA

Downstream 100 bases:

>100_bases
GGCCTGCCTCAAATCGCTAAATAATCTGACAGCGCCGAGCCGCCGCTGATGGTTCACTGCCTCCATCCAACAAGGATGGA
GGATCATCATGCATAGCTCG

Product: myo-inositol catabolism IolB domain-containing protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPNLKVKPSGTHGRVTHVTPENAGWTYVGFDLHRLEPGETVSGETGDREICLVWVTGKGKASAGTKDFGTLGGRMNPFEG
APHALYIPMESTWSVTAETDLELAVCSAPGGGTYQAKEIPPGTHPQVTRGKGTNVRYVNNIMPEDDSSAHSLLVVEVITP
GGHTSSYPPHKHDQDDLPNESFLEETYYHRLNPPQGFGFQRVYTDDRSLDEAMAIEDGDVTLVPKGYHPCAATHGYDLYY
LNVMAGPKRIWKFHNAVEHEWLIKA

Sequences:

>Translated_265_residues
MPNLKVKPSGTHGRVTHVTPENAGWTYVGFDLHRLEPGETVSGETGDREICLVWVTGKGKASAGTKDFGTLGGRMNPFEG
APHALYIPMESTWSVTAETDLELAVCSAPGGGTYQAKEIPPGTHPQVTRGKGTNVRYVNNIMPEDDSSAHSLLVVEVITP
GGHTSSYPPHKHDQDDLPNESFLEETYYHRLNPPQGFGFQRVYTDDRSLDEAMAIEDGDVTLVPKGYHPCAATHGYDLYY
LNVMAGPKRIWKFHNAVEHEWLIKA
>Mature_264_residues
PNLKVKPSGTHGRVTHVTPENAGWTYVGFDLHRLEPGETVSGETGDREICLVWVTGKGKASAGTKDFGTLGGRMNPFEGA
PHALYIPMESTWSVTAETDLELAVCSAPGGGTYQAKEIPPGTHPQVTRGKGTNVRYVNNIMPEDDSSAHSLLVVEVITPG
GHTSSYPPHKHDQDDLPNESFLEETYYHRLNPPQGFGFQRVYTDDRSLDEAMAIEDGDVTLVPKGYHPCAATHGYDLYYL
NVMAGPKRIWKFHNAVEHEWLIKA

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29142; Mature: 29011

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLKVKPSGTHGRVTHVTPENAGWTYVGFDLHRLEPGETVSGETGDREICLVWVTGKGK
CCCCEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
ASAGTKDFGTLGGRMNPFEGAPHALYIPMESTWSVTAETDLELAVCSAPGGGTYQAKEIP
CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCEEECCCC
PGTHPQVTRGKGTNVRYVNNIMPEDDSSAHSLLVVEVITPGGHTSSYPPHKHDQDDLPNE
CCCCCCEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCH
SFLEETYYHRLNPPQGFGFQRVYTDDRSLDEAMAIEDGDVTLVPKGYHPCAATHGYDLYY
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHEEECCCCEEEEECCCCCCCCCCCCEEEE
LNVMAGPKRIWKFHNAVEHEWLIKA
EEEECCHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
PNLKVKPSGTHGRVTHVTPENAGWTYVGFDLHRLEPGETVSGETGDREICLVWVTGKGK
CCCEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
ASAGTKDFGTLGGRMNPFEGAPHALYIPMESTWSVTAETDLELAVCSAPGGGTYQAKEIP
CCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCEEECCCC
PGTHPQVTRGKGTNVRYVNNIMPEDDSSAHSLLVVEVITPGGHTSSYPPHKHDQDDLPNE
CCCCCCEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCH
SFLEETYYHRLNPPQGFGFQRVYTDDRSLDEAMAIEDGDVTLVPKGYHPCAATHGYDLYY
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHEEECCCCEEEEECCCCCCCCCCCCEEEE
LNVMAGPKRIWKFHNAVEHEWLIKA
EEEECCHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA