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The map label for this gene is ydiS [C]

Identifier: 209548545

GI number: 209548545

Start: 964648

End: 966312

Strand: Direct

Name: ydiS [C]

Synonym: Rleg2_0942

Alternate gene names: 209548545

Gene position: 964648-966312 (Clockwise)

Preceding gene: 209548543

Following gene: 209548546

Centisome position: 21.26

GC content: 61.68

Gene sequence:

>1665_bases
ATGACCGAGACGACTGAGTTGCCCGAACGCGAGAGCATGGAATTCGATGTGGTGATCGTCGGTGCAGGTCCGGCCGGTCT
TTCCGCGGCGATCCGGCTGAAGCAGGTCAATCCGGAGCTTTCGGTCGTTGTGCTGGAGAAGGGCTCGGAAGTCGGCGCCC
ACATTCTCTCCGGTGCCGTCGTCGATCCGATCGGCATCGATCGACTGCTGCCCGGCTGGCGCCAGGAAGCCGACCATCCC
TTCAAGACCGAGGTCAAATCAGACCACTTCCTGCTGCTTGGTCCCGCCGGCTCGATCCGCCTGCCGAATTTTTTGATGCC
GCCGCTGATGAACAATCACGGCAACTACATCGTCTCGCTCGGCCTCGTCTGTCGCTGGCTGGCTACTAAGGCTGAGGAGC
TCGGCGTCGAGATCTATCCGGGCTTTGCTGCCACCGAAGTGCTCTATGATGACAAGGGTGCGGTGATCGGCGTCGCCACC
GGCGATATGGGCATCGAGAAGAACGGCGAGCCCGGCCCGAACTATACCCGCGGCATGGAACTGCTCGGCAAATATGTGCT
GATCGGCGAGGGCGTGCGCGGCTCGCTCGCCAAGCAGCTGATCGCCAAATTCGATCTGCAGAAGGACCGCGAACCGCAAA
AGTTCGGCATCGGCATCAAGGAGCTCTGGCAGGTCAAGCCGGAAAACCATCGGCAGGGCCTGGTTCAGCACTCCTTCGGC
TGGCCGCTAGGGATGAAGACCGGCGGCGGTTCCTTCCTCTATCACCTGGAAGACAATCTGGTCGCCGTCGGCTTCGTCGT
CCATCTGAACTACAAGAACCCCTATCTCTATCCCTTCGAGGAGTTCCAGCGCTTCAAGACCCATCCCGCCATTCGAGGCA
CCTTCGAGGGCGGCAAGCGGCTCTCCTATGGCGCCCGCGCCATCACCGAGGGCGGCTACCAGTCGGTGCCGAAGCTCTCC
TTCCCGGGCGGGGCGCTGATCGGCTGTTCGGCCGGTCTGGTCAACGTTCCCCGCATCAAGGGCAGCCACAATGCGGTGCT
GTCGGGCATGCTGGCGGCCGAGAAGATCGCGGCGGCAATTACAGTCGGCCGCAGCCATGACGAGGTCACCGAGATCGAGA
ACGAATGGCGCCAGGGCGACATCGGCAAGGATCTGAAGCGGGTGAGAAACGTCAAGCCGCTGTGGTCGAAGTTCGGCACC
GCGCTCGGCGTGGCGCTCGGCGGTCTCGACATGTGGACCAACACCTTGTTCGGCTTTTCCTTCTTCGGCACGCTTGGTCA
CGGCAAGACCGATGCGCAGTCGCTGGAGCCGGCATCCCAGCACAAGCCGATCGCCTATCCGAAACCGGATGGCGTTTTGA
CCTTCGACCGTCTGTCCTCAGTGTTCCTGTCGAACACCAATCACGAGGAGGATCAGCCGGTGCATCTGCAGGTCAAGGAC
ATGGGCCTGCAGAAGCGATCCGAACATGACATCTATGCCGGCCCGTCGACGCGTTACTGTCCGGCCGGCGTCTATGAATG
GGTGGAGAAGGACGGGCAGGACACCTTCGTCATCAACGCCCAGAACTGCGTCCACTGCAAGACCTGCGACATCAAGGATC
CCAACCAGAATATCAACTGGGTGCCGCCGCAGGGTGGCGAGGGGCCGGTCTATCCGAATATGTGA

Upstream 100 bases:

>100_bases
AAGATTGGCTGTCGTATCCCGGCTCGACAACGCTTTCTCGTTTTGACAAGAAAGTGCTTATGAGGATGACGGCCGTGTGC
CGCCAAGCGGAGACGAGTGA

Downstream 100 bases:

>100_bases
GGCGGATTATCCCCACCGCCGACAATTTTTACGTGCTGACGCCTTCGTGATCACTTGCTGCGGGCTGCCGTTAGCCGTTC
GTTAACCATAATTTCCTTAG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTETTELPERESMEFDVVIVGAGPAGLSAAIRLKQVNPELSVVVLEKGSEVGAHILSGAVVDPIGIDRLLPGWRQEADHP
FKTEVKSDHFLLLGPAGSIRLPNFLMPPLMNNHGNYIVSLGLVCRWLATKAEELGVEIYPGFAATEVLYDDKGAVIGVAT
GDMGIEKNGEPGPNYTRGMELLGKYVLIGEGVRGSLAKQLIAKFDLQKDREPQKFGIGIKELWQVKPENHRQGLVQHSFG
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQSVPKLS
FPGGALIGCSAGLVNVPRIKGSHNAVLSGMLAAEKIAAAITVGRSHDEVTEIENEWRQGDIGKDLKRVRNVKPLWSKFGT
ALGVALGGLDMWTNTLFGFSFFGTLGHGKTDAQSLEPASQHKPIAYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
MGLQKRSEHDIYAGPSTRYCPAGVYEWVEKDGQDTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM

Sequences:

>Translated_554_residues
MTETTELPERESMEFDVVIVGAGPAGLSAAIRLKQVNPELSVVVLEKGSEVGAHILSGAVVDPIGIDRLLPGWRQEADHP
FKTEVKSDHFLLLGPAGSIRLPNFLMPPLMNNHGNYIVSLGLVCRWLATKAEELGVEIYPGFAATEVLYDDKGAVIGVAT
GDMGIEKNGEPGPNYTRGMELLGKYVLIGEGVRGSLAKQLIAKFDLQKDREPQKFGIGIKELWQVKPENHRQGLVQHSFG
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQSVPKLS
FPGGALIGCSAGLVNVPRIKGSHNAVLSGMLAAEKIAAAITVGRSHDEVTEIENEWRQGDIGKDLKRVRNVKPLWSKFGT
ALGVALGGLDMWTNTLFGFSFFGTLGHGKTDAQSLEPASQHKPIAYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
MGLQKRSEHDIYAGPSTRYCPAGVYEWVEKDGQDTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM
>Mature_553_residues
TETTELPERESMEFDVVIVGAGPAGLSAAIRLKQVNPELSVVVLEKGSEVGAHILSGAVVDPIGIDRLLPGWRQEADHPF
KTEVKSDHFLLLGPAGSIRLPNFLMPPLMNNHGNYIVSLGLVCRWLATKAEELGVEIYPGFAATEVLYDDKGAVIGVATG
DMGIEKNGEPGPNYTRGMELLGKYVLIGEGVRGSLAKQLIAKFDLQKDREPQKFGIGIKELWQVKPENHRQGLVQHSFGW
PLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKRLSYGARAITEGGYQSVPKLSF
PGGALIGCSAGLVNVPRIKGSHNAVLSGMLAAEKIAAAITVGRSHDEVTEIENEWRQGDIGKDLKRVRNVKPLWSKFGTA
LGVALGGLDMWTNTLFGFSFFGTLGHGKTDAQSLEPASQHKPIAYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKDM
GLQKRSEHDIYAGPSTRYCPAGVYEWVEKDGQDTFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=561, Percent_Identity=51.8716577540107, Blast_Score=547, Evalue=1e-156,
Organism=Escherichia coli, GI1787991, Length=397, Percent_Identity=25.4408060453401, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1786227, Length=329, Percent_Identity=26.7477203647416, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87082155, Length=295, Percent_Identity=27.1186440677966, Blast_Score=79, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=566, Percent_Identity=50.1766784452297, Blast_Score=530, Evalue=1e-151,
Organism=Saccharomyces cerevisiae, GI6324932, Length=570, Percent_Identity=44.9122807017544, Blast_Score=468, Evalue=1e-132,
Organism=Drosophila melanogaster, GI24652256, Length=564, Percent_Identity=54.6099290780142, Blast_Score=569, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60580; Mature: 60449

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTELPERESMEFDVVIVGAGPAGLSAAIRLKQVNPELSVVVLEKGSEVGAHILSGAV
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCE
VDPIGIDRLLPGWRQEADHPFKTEVKSDHFLLLGPAGSIRLPNFLMPPLMNNHGNYIVSL
ECCCCHHHHCCCHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEH
GLVCRWLATKAEELGVEIYPGFAATEVLYDDKGAVIGVATGDMGIEKNGEPGPNYTRGME
HHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LLGKYVLIGEGVRGSLAKQLIAKFDLQKDREPQKFGIGIKELWQVKPENHRQGLVQHSFG
HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCHHHCCHHHHCCC
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCE
LSYGARAITEGGYQSVPKLSFPGGALIGCSAGLVNVPRIKGSHNAVLSGMLAAEKIAAAI
ECCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHE
TVGRSHDEVTEIENEWRQGDIGKDLKRVRNVKPLWSKFGTALGVALGGLDMWTNTLFGFS
EECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FFGTLGHGKTDAQSLEPASQHKPIAYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
HHHHCCCCCCCHHHCCCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEC
MGLQKRSEHDIYAGPSTRYCPAGVYEWVEKDGQDTFVINAQNCVHCKTCDIKDPNQNINW
CCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCE
VPPQGGEGPVYPNM
ECCCCCCCCCCCCC
>Mature Secondary Structure 
TETTELPERESMEFDVVIVGAGPAGLSAAIRLKQVNPELSVVVLEKGSEVGAHILSGAV
CCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCE
VDPIGIDRLLPGWRQEADHPFKTEVKSDHFLLLGPAGSIRLPNFLMPPLMNNHGNYIVSL
ECCCCHHHHCCCHHHHCCCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEH
GLVCRWLATKAEELGVEIYPGFAATEVLYDDKGAVIGVATGDMGIEKNGEPGPNYTRGME
HHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
LLGKYVLIGEGVRGSLAKQLIAKFDLQKDREPQKFGIGIKELWQVKPENHRQGLVQHSFG
HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCHHHCCHHHHCCC
WPLGMKTGGGSFLYHLEDNLVAVGFVVHLNYKNPYLYPFEEFQRFKTHPAIRGTFEGGKR
CCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCE
LSYGARAITEGGYQSVPKLSFPGGALIGCSAGLVNVPRIKGSHNAVLSGMLAAEKIAAAI
ECCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHE
TVGRSHDEVTEIENEWRQGDIGKDLKRVRNVKPLWSKFGTALGVALGGLDMWTNTLFGFS
EECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
FFGTLGHGKTDAQSLEPASQHKPIAYPKPDGVLTFDRLSSVFLSNTNHEEDQPVHLQVKD
HHHHCCCCCCCHHHCCCHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEC
MGLQKRSEHDIYAGPSTRYCPAGVYEWVEKDGQDTFVINAQNCVHCKTCDIKDPNQNINW
CCCCCCCCCCEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCE
VPPQGGEGPVYPNM
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]