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The map label for this gene is betI [H]

Identifier: 209548382

GI number: 209548382

Start: 797242

End: 797877

Strand: Reverse

Name: betI [H]

Synonym: Rleg2_0778

Alternate gene names: 209548382

Gene position: 797877-797242 (Counterclockwise)

Preceding gene: 209548386

Following gene: 209548381

Centisome position: 17.58

GC content: 64.47

Gene sequence:

>636_bases
TTGCCGAAAGTCGGAATGGAGCCGGTGCGCCGCAAGGCGCTCGTCGATGCGGCGCTGCGGGTGATCGGCGATCACGGCTC
GCTTGCCGTCACCATGTCCGACATCGCCCGCCAGGCCGGCGTGTCGCCGGCCCTTGCCCATCACTATTTCGGCAGCAAGG
AACAGTTGCTGATCGAGACGATCCGCTCGCTTCTGAGGCAATTGCGCAGCGATACGGTGGCGGCGCTGAAGGCGGCGCAG
ACGCCGCGTGCCCGGCTTTCGGCGGTTATCCGTGTCAACTTCCATGCCGACCAGTTCGCGCCCGAGACGATCGCCGCCTG
GCTTGCCTTTTACGCCGAAGCGCAACGCTCGGAGGAGACGCGCCGCTTCCTGGTGATCTACGCCCGCCGGCTGCGCTCCA
ACCTGCTTGCCGCTCTCAAGGCGCTGCTGCCCGCCGACGCCGCAGAACGCATCGCCGAGGGCGCTGCGGCGATGATCGAC
GGGCTTTACATCAGGCAAAGTCTGAAATCGGCGCCGATCGGCATCGAAGCCTCGATCGCGCTGACGGAGGATTATCTGAA
TGCGCTTCTGGTCAGCGCCTCCCCTTTCAAGGGAGGTGGGACAACCACATCGAACACCCAAGGACAAATGACATGA

Upstream 100 bases:

>100_bases
CTCGGGAAAAGATGCGATCGGCGCGAGATCGCGAAAGATTTTTGTTGATTGATCAGTCAATCAAAAATACTCTGGTCGAA
ATTTCAAGGGAGTTGGCGCT

Downstream 100 bases:

>100_bases
AAGCCCAGCCGAAAGCCTCGCACTTCATCGACGGCGAATATGTCGAGGATACCGACGGCACCGTCATCGAGAGCCTCTAT
CCTGCCACCGGCGAGGTGAT

Product: BetI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPKVGMEPVRRKALVDAALRVIGDHGSLAVTMSDIARQAGVSPALAHHYFGSKEQLLIETIRSLLRQLRSDTVAALKAAQ
TPRARLSAVIRVNFHADQFAPETIAAWLAFYAEAQRSEETRRFLVIYARRLRSNLLAALKALLPADAAERIAEGAAAMID
GLYIRQSLKSAPIGIEASIALTEDYLNALLVSASPFKGGGTTTSNTQGQMT

Sequences:

>Translated_211_residues
MPKVGMEPVRRKALVDAALRVIGDHGSLAVTMSDIARQAGVSPALAHHYFGSKEQLLIETIRSLLRQLRSDTVAALKAAQ
TPRARLSAVIRVNFHADQFAPETIAAWLAFYAEAQRSEETRRFLVIYARRLRSNLLAALKALLPADAAERIAEGAAAMID
GLYIRQSLKSAPIGIEASIALTEDYLNALLVSASPFKGGGTTTSNTQGQMT
>Mature_210_residues
PKVGMEPVRRKALVDAALRVIGDHGSLAVTMSDIARQAGVSPALAHHYFGSKEQLLIETIRSLLRQLRSDTVAALKAAQT
PRARLSAVIRVNFHADQFAPETIAAWLAFYAEAQRSEETRRFLVIYARRLRSNLLAALKALLPADAAERIAEGAAAMIDG
LYIRQSLKSAPIGIEASIALTEDYLNALLVSASPFKGGGTTTSNTQGQMT

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=192, Percent_Identity=36.4583333333333, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22769; Mature: 22637

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVGMEPVRRKALVDAALRVIGDHGSLAVTMSDIARQAGVSPALAHHYFGSKEQLLIET
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
IRSLLRQLRSDTVAALKAAQTPRARLSAVIRVNFHADQFAPETIAAWLAFYAEAQRSEET
HHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEEECCCHHCCHHHHHHHHHHHHHHHHHHHH
RRFLVIYARRLRSNLLAALKALLPADAAERIAEGAAAMIDGLYIRQSLKSAPIGIEASIA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
LTEDYLNALLVSASPFKGGGTTTSNTQGQMT
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKVGMEPVRRKALVDAALRVIGDHGSLAVTMSDIARQAGVSPALAHHYFGSKEQLLIET
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHCCCCHHHHHHH
IRSLLRQLRSDTVAALKAAQTPRARLSAVIRVNFHADQFAPETIAAWLAFYAEAQRSEET
HHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEEECCCHHCCHHHHHHHHHHHHHHHHHHHH
RRFLVIYARRLRSNLLAALKALLPADAAERIAEGAAAMIDGLYIRQSLKSAPIGIEASIA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHH
LTEDYLNALLVSASPFKGGGTTTSNTQGQMT
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9736747; 11481430 [H]