| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is yjgH [C]
Identifier: 209548322
GI number: 209548322
Start: 741411
End: 741899
Strand: Direct
Name: yjgH [C]
Synonym: Rleg2_0717
Alternate gene names: 209548322
Gene position: 741411-741899 (Clockwise)
Preceding gene: 209548316
Following gene: 209548324
Centisome position: 16.34
GC content: 61.55
Gene sequence:
>489_bases ATGTCACGCGCAATCAAGCATCTGCTCATTGGAGGGCTCATCATCATGACCATTGGAATTCCGGCTGCGGCGACGGCCAA CGAGACCGATCTGAAGCTCACCATCGTCAATCCGAAAAACCTCTACGACCCCTCGCCGAACGGCTACAGCACGGCGGTGA TCGTGCCGAGGCAAGGCCGGCTGGCCTATATTTCCGGGCAGGGCGGCCAGGACAGCACCGGCGCCCTGTCACCCGATTTC GCCGTCCAGGTGAAGCAGGCCTATGCCAATTTGCACACCGCCCTCGACGCGCTCGGCGCCAGGCCCGATCAGGTCGCCAA GCTGACCGTCTTCGTGGTCGATCACGACATGGCGAAGCTTCAAGTGTTGACGGAAAACGTCAAGGCGATGTTCGGCGCAG CCCTGCCGGCGCAGACTTTGATCCCGGTTCCCAAGCTGGCCATCGACCCCATGCTCTTCGAGGTCGAAGCCGTCGTCGTC TTGGACTAG
Upstream 100 bases:
>100_bases GCAAATTTATCGTACGCTGTACGAGTCAATCGTACCGGCGGTAAATCAACTGCCGGCCGCGGCGAGGTGGCCCGCAGTTC TCAACGCTCAAGAGAAAATC
Downstream 100 bases:
>100_bases GCATACTGAAGCTCGACAGCCTTCGCCTGCGCGGCGGTTGACCAGGGATGGTCAATCCGCCTTCAGTTGCTCGGGAAGCT GTCCATAAGCCGTCAGAATG
Product: endoribonuclease L-PSP
Products: NA
Alternate protein names: Translational Inhibitor Protein; Ribonuclease; Endoribonuclease Family Protein; Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; Endoribonuclease L-PSP Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Superfamily; Exported Endoribonuclease Family Protein
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSRAIKHLLIGGLIIMTIGIPAAATANETDLKLTIVNPKNLYDPSPNGYSTAVIVPRQGRLAYISGQGGQDSTGALSPDF AVQVKQAYANLHTALDALGARPDQVAKLTVFVVDHDMAKLQVLTENVKAMFGAALPAQTLIPVPKLAIDPMLFEVEAVVV LD
Sequences:
>Translated_162_residues MSRAIKHLLIGGLIIMTIGIPAAATANETDLKLTIVNPKNLYDPSPNGYSTAVIVPRQGRLAYISGQGGQDSTGALSPDF AVQVKQAYANLHTALDALGARPDQVAKLTVFVVDHDMAKLQVLTENVKAMFGAALPAQTLIPVPKLAIDPMLFEVEAVVV LD >Mature_161_residues SRAIKHLLIGGLIIMTIGIPAAATANETDLKLTIVNPKNLYDPSPNGYSTAVIVPRQGRLAYISGQGGQDSTGALSPDFA VQVKQAYANLHTALDALGARPDQVAKLTVFVVDHDMAKLQVLTENVKAMFGAALPAQTLIPVPKLAIDPMLFEVEAVVVL D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17128; Mature: 16997
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAIKHLLIGGLIIMTIGIPAAATANETDLKLTIVNPKNLYDPSPNGYSTAVIVPRQGR CCHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC LAYISGQGGQDSTGALSPDFAVQVKQAYANLHTALDALGARPDQVAKLTVFVVDHDMAKL EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHH QVLTENVKAMFGAALPAQTLIPVPKLAIDPMLFEVEAVVVLD HHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEEEEEEEEC >Mature Secondary Structure SRAIKHLLIGGLIIMTIGIPAAATANETDLKLTIVNPKNLYDPSPNGYSTAVIVPRQGR CHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC LAYISGQGGQDSTGALSPDFAVQVKQAYANLHTALDALGARPDQVAKLTVFVVDHDMAKL EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCHHHH QVLTENVKAMFGAALPAQTLIPVPKLAIDPMLFEVEAVVVLD HHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA