| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209548307
Identifier: 209548307
GI number: 209548307
Start: 726436
End: 727320
Strand: Direct
Name: 209548307
Synonym: Rleg2_0702
Alternate gene names: NA
Gene position: 726436-727320 (Clockwise)
Preceding gene: 209548306
Following gene: 209548312
Centisome position: 16.01
GC content: 66.21
Gene sequence:
>885_bases ATGAACATGCGCGCCACGCCTGCCGCCCTGATGCCGGCGATCCATCCGGTCAGCCTGCGGGTCGACACCTATCTGATCAA TCTCGATCGGGCGCCGTTGCGCCGGTTTCGGATGGAGCGCCTGCTGGTGGGCATCGGCCTTGCCTTCGAGCGGGTGGCGG CGGTGGATGGGGCAGGGCTCAGCCTGCCGCATCCGGATTTCGACGAAGCCGCCTATCTGAGCCGGCATGGCCGCCGGCCG AACCCTTTCGAGATCGGCTGCTTTTTCAGCCATGTCGAATGCGCCAGGCGCTTCCTCTCCGGCAATGCCGAATTTGCGCT CATTCTCGAAGACGACCTCGATTTCGACGAGGACCTCGCTGACGTGATCGAGGCCGCCCTGCAGCACCAGACGCGCTGGG ACATTCTGCGTCTTTCCACCGTCAATACCGGGCGCAAGCATAGGGTGGAGGCGCTCACCGCATCGCGCTCGCTCGCCATT GCGCTGACCCGCGAGAAGGGCTCCGGCGCCTATCTGATCAACCGCAAGGCGGCCGGCTGGATTGCCGGTTCAATGCTGCC GATGCGGCTGCCCTATGATCTCGCCTTCGACCTGGAGTTCGATGAGGGCTTGAGCGCCTGCTTCGTCGATCCGCTGCCGG TCAGCCAGAGGGCGGATGCCTGCTCCCAGATCCAGGCAGGGCTTTCGGCCTACCGGCTTGGCCGCCGCCGGCCGTGGAGC GTTCTGCCCTATCGCGCGGCGGCCGAAATACGCCGCTTTGCCGCCCGCTTCGGCCGCCTCGTGGCGTGGAGGGTGAGCGG TCAAGACCGCTCACCCGGGATGAAAGGTCAGGACCGCTCACCCGGGAGCAGCGGAAAGCCGATCGAGACGATGAGGCCGG GCTGA
Upstream 100 bases:
>100_bases AGACACCCGCACCTTACGAAAATGTATAGCCCCGGCGAGGTGCCGGTGAGATTTCGGGCGCAGGCTTGGTGCAGTCATTG CCAAGTCGAAGGCCAGTTTC
Downstream 100 bases:
>100_bases TTGTCTCCCATGGTGATCTCAGCCGCATGCAGCTCGGCGATCGCCTTGACGAGGCTGAGCCCGAGCCCGCTTCCTGATGT CGTGCGGCTTTTGTCCAGCC
Product: glycosyl transferase family 25
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNMRATPAALMPAIHPVSLRVDTYLINLDRAPLRRFRMERLLVGIGLAFERVAAVDGAGLSLPHPDFDEAAYLSRHGRRP NPFEIGCFFSHVECARRFLSGNAEFALILEDDLDFDEDLADVIEAALQHQTRWDILRLSTVNTGRKHRVEALTASRSLAI ALTREKGSGAYLINRKAAGWIAGSMLPMRLPYDLAFDLEFDEGLSACFVDPLPVSQRADACSQIQAGLSAYRLGRRRPWS VLPYRAAAEIRRFAARFGRLVAWRVSGQDRSPGMKGQDRSPGSSGKPIETMRPG
Sequences:
>Translated_294_residues MNMRATPAALMPAIHPVSLRVDTYLINLDRAPLRRFRMERLLVGIGLAFERVAAVDGAGLSLPHPDFDEAAYLSRHGRRP NPFEIGCFFSHVECARRFLSGNAEFALILEDDLDFDEDLADVIEAALQHQTRWDILRLSTVNTGRKHRVEALTASRSLAI ALTREKGSGAYLINRKAAGWIAGSMLPMRLPYDLAFDLEFDEGLSACFVDPLPVSQRADACSQIQAGLSAYRLGRRRPWS VLPYRAAAEIRRFAARFGRLVAWRVSGQDRSPGMKGQDRSPGSSGKPIETMRPG >Mature_294_residues MNMRATPAALMPAIHPVSLRVDTYLINLDRAPLRRFRMERLLVGIGLAFERVAAVDGAGLSLPHPDFDEAAYLSRHGRRP NPFEIGCFFSHVECARRFLSGNAEFALILEDDLDFDEDLADVIEAALQHQTRWDILRLSTVNTGRKHRVEALTASRSLAI ALTREKGSGAYLINRKAAGWIAGSMLPMRLPYDLAFDLEFDEGLSACFVDPLPVSQRADACSQIQAGLSAYRLGRRRPWS VLPYRAAAEIRRFAARFGRLVAWRVSGQDRSPGMKGQDRSPGSSGKPIETMRPG
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32677; Mature: 32677
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMRATPAALMPAIHPVSLRVDTYLINLDRAPLRRFRMERLLVGIGLAFERVAAVDGAGL CCCCCCCHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLPHPDFDEAAYLSRHGRRPNPFEIGCFFSHVECARRFLSGNAEFALILEDDLDFDEDLA CCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH DVIEAALQHQTRWDILRLSTVNTGRKHRVEALTASRSLAIALTREKGSGAYLINRKAAGW HHHHHHHHCCCHHCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCC IAGSMLPMRLPYDLAFDLEFDEGLSACFVDPLPVSQRADACSQIQAGLSAYRLGRRRPWS CCCCCCCEECCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VLPYRAAAEIRRFAARFGRLVAWRVSGQDRSPGMKGQDRSPGSSGKPIETMRPG CCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNMRATPAALMPAIHPVSLRVDTYLINLDRAPLRRFRMERLLVGIGLAFERVAAVDGAGL CCCCCCCHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SLPHPDFDEAAYLSRHGRRPNPFEIGCFFSHVECARRFLSGNAEFALILEDDLDFDEDLA CCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH DVIEAALQHQTRWDILRLSTVNTGRKHRVEALTASRSLAIALTREKGSGAYLINRKAAGW HHHHHHHHCCCHHCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCCCC IAGSMLPMRLPYDLAFDLEFDEGLSACFVDPLPVSQRADACSQIQAGLSAYRLGRRRPWS CCCCCCCEECCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VLPYRAAAEIRRFAARFGRLVAWRVSGQDRSPGMKGQDRSPGSSGKPIETMRPG CCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA