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The map label for this gene is insD1 [C]

Identifier: 209548279

GI number: 209548279

Start: 701645

End: 702574

Strand: Direct

Name: insD1 [C]

Synonym: Rleg2_0674

Alternate gene names: 209548279

Gene position: 701645-702574 (Clockwise)

Preceding gene: 209548278

Following gene: 209548282

Centisome position: 15.46

GC content: 62.15

Gene sequence:

>930_bases
ATGGTAGGGCCTGCCGCCAAGCGTGAAGGCGTCACGCATCTGAAGGCCGTGATGGGTCTTTCGGAGCGGCGGGCCTGCCA
GATCATATCCGCCGACCGCAAGACGATCCGCTACCAGGCGAACCGACCGCCGGAGACGGAGTTGCGAGCAAAGCTGCGTG
ACCTCGCCAACGAGCGGCGGCGTTTCGGCTACCGGCGACTGTTCGTCCTGCTTCGGCGGGAGGGAGAACCGTCCGGGGTC
AATCGCATCTATCGCCTTTATCGCGACGAGGGTCTCTCTGTCCGCAAGCGCAAAGCCAGACGCCGTGCTGTCGGCACCCG
TGCTCCGATTCTGGTCGAAGCGAAGGCCAATGCCCGATGGTCGCTGGACTTCGTGCACGACCAGTTTGCCTGCGGCAGAC
GCTTCCGCGTGCTCAACATTGTCGATGATGTGACGCGCGAATGCCTGGCAGCAATCCCGGACACCTCGATCTCCGGCCGC
CGCGTCGCACGGGAGCTGACGGCGCTGATCGAACGACGCGGCAAGCCCGGAATGATCGTCTCCGACAACGGCACGGAGTT
CACCTCGAATGCCATCCTTGCCTGGTCGAAGGATCACAAGGTCGAGTGGCACTACATCGCGCCGGGAAAGCCGATGCAGA
ACGGCTATGTCGAGAGCTTCAACGGCCGGATGCGCGACGAACTGCTCAACGAAAGCCTCTTCTTTGGCCTCGATCATGCC
CGAAGTGCCATTGCCGAATGGGCTGAGGATTATAACAATTTCCGGCCGCACTCATCGCTCGGATATCAGACCCCGGCAAG
CTATGCCGGGACCATCGCCGCAACCGGCTCCAACGCTGCGCAAGATGAAAGCTTCGCGTTTCCGCCGGTTGCTCACACCG
CGCCACTTGGCGTATTCAAAACCGCCGGGGCTCTAATCGCAGCTGGATGA

Upstream 100 bases:

>100_bases
AACGGCTGAAGGCGCTTGAGGACGAGAACGCGAGACTGAAGAAGCTGCTCGCCGAGCAACTGCTGGATGCGGCCGCGCTC
CGCGAGCTTCTCGCAAAAAA

Downstream 100 bases:

>100_bases
AAGTTCAGTGGCAGGTCACTACCTCTTGAACTTAAACGGGATTACCATTCAGAAATCTGGTCGGCGTGCTCTGAACAGCT
TGATCGTTTATATACGCGCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MVGPAAKREGVTHLKAVMGLSERRACQIISADRKTIRYQANRPPETELRAKLRDLANERRRFGYRRLFVLLRREGEPSGV
NRIYRLYRDEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGR
RVARELTALIERRGKPGMIVSDNGTEFTSNAILAWSKDHKVEWHYIAPGKPMQNGYVESFNGRMRDELLNESLFFGLDHA
RSAIAEWAEDYNNFRPHSSLGYQTPASYAGTIAATGSNAAQDESFAFPPVAHTAPLGVFKTAGALIAAG

Sequences:

>Translated_309_residues
MVGPAAKREGVTHLKAVMGLSERRACQIISADRKTIRYQANRPPETELRAKLRDLANERRRFGYRRLFVLLRREGEPSGV
NRIYRLYRDEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGR
RVARELTALIERRGKPGMIVSDNGTEFTSNAILAWSKDHKVEWHYIAPGKPMQNGYVESFNGRMRDELLNESLFFGLDHA
RSAIAEWAEDYNNFRPHSSLGYQTPASYAGTIAATGSNAAQDESFAFPPVAHTAPLGVFKTAGALIAAG
>Mature_309_residues
MVGPAAKREGVTHLKAVMGLSERRACQIISADRKTIRYQANRPPETELRAKLRDLANERRRFGYRRLFVLLRREGEPSGV
NRIYRLYRDEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGR
RVARELTALIERRGKPGMIVSDNGTEFTSNAILAWSKDHKVEWHYIAPGKPMQNGYVESFNGRMRDELLNESLFFGLDHA
RSAIAEWAEDYNNFRPHSSLGYQTPASYAGTIAATGSNAAQDESFAFPPVAHTAPLGVFKTAGALIAAG

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1789424, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1789224, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788305, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1787669, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786558, Length=250, Percent_Identity=29.2, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34614; Mature: 34614

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGPAAKREGVTHLKAVMGLSERRACQIISADRKTIRYQANRPPETELRAKLRDLANERR
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
RFGYRRLFVLLRREGEPSGVNRIYRLYRDEGLSVRKRKARRRAVGTRAPILVEAKANARW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
SLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGRRVARELTALIERRGKPGMIV
EEHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
SDNGTEFTSNAILAWSKDHKVEWHYIAPGKPMQNGYVESFNGRMRDELLNESLFFGLDHA
CCCCCEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
RSAIAEWAEDYNNFRPHSSLGYQTPASYAGTIAATGSNAAQDESFAFPPVAHTAPLGVFK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
TAGALIAAG
HCCEEEECC
>Mature Secondary Structure
MVGPAAKREGVTHLKAVMGLSERRACQIISADRKTIRYQANRPPETELRAKLRDLANERR
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
RFGYRRLFVLLRREGEPSGVNRIYRLYRDEGLSVRKRKARRRAVGTRAPILVEAKANARW
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
SLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGRRVARELTALIERRGKPGMIV
EEHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
SDNGTEFTSNAILAWSKDHKVEWHYIAPGKPMQNGYVESFNGRMRDELLNESLFFGLDHA
CCCCCEECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
RSAIAEWAEDYNNFRPHSSLGYQTPASYAGTIAATGSNAAQDESFAFPPVAHTAPLGVFK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
TAGALIAAG
HCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]