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The map label for this gene is ygeX [H]

Identifier: 209548236

GI number: 209548236

Start: 652674

End: 653885

Strand: Reverse

Name: ygeX [H]

Synonym: Rleg2_0630

Alternate gene names: 209548236

Gene position: 653885-652674 (Counterclockwise)

Preceding gene: 209548238

Following gene: 209548235

Centisome position: 14.41

GC content: 65.68

Gene sequence:

>1212_bases
ATGTTTCTGCTGAACACCAATGCCGACTACCGCCAGCCCCTCGACCCGCGGGACGCCGAAATCCTCGGGATAGAGGCGGC
AGACGCGGTCGAGCGCCACCTGACATTCCGGGAAAACCATGCGGAAACGCCGCTCGTGGCCTTGCCGGCGCTGGCGGCCG
AACTCGGTGTCGGCTCGATCCATGTGAAAGACGAGGGCCACCGGCTCGGCCTCGGAAGCTTCAAGGCGCTTGGCGGTGCC
TATGCCGTGATCCGGCTGGTCCTCGAGGAAGCGGCAAGGAGGCTCGGCCGTGCCGTCGATGTCTCCGAATTGCATTCTTT
CAATGTCCGAGAGGTGGCCGAGACGATGACCGTCGCCTGCGCCACCGACGGCAATCATGGCCGGTCGGTTGCACAGGGTG
CGCAGCTTGTGGGAGCCCGGGCGGCGATTTTCGTGCATGCCGGCGTCAGCGACGAACGCGTCGCCGCCATCGCCCGCTTC
GGCGCCGAGATGATCCGTGTGGACGGGACCTATGACGATTCCGTTCGCGAGGCGGCCCGCATTGCCGAGGAGAAAGGCTG
GACCATCGTCTCGGACACGTCATGGCCGGGTTATGAGCGCATTCCCGGGCTGGTGATGCAGGGCTACACCGCCCTTGTCC
GGGAGGCGCTGAGGGCAATGCCGCAGCCGCCCACCCATGTCTTCATTCAGGCTGGCGTCGGGGGGATCGCCGCCACTGTC
GCAGGGCATATGGCGATCGCGTTCGGCGACAACCGTCCGACCTTCACGGTCGTCGACCCCGCCCGCGCCGCCTGCCTGTT
TGAAACGGCGCGGGCCGGACATCCGGTGACCGTTGCCCATGGCGAGCCGACCGTGATGGCGATGCTCGAATGTTACGAAC
CTTCGCTTGTCGCCTGGCGTATCCTCTCGCGTGTCGCAGACGCATTCATGACTGTGGAGGAAGACGAGGCGATCGCGGTG
ATGAGGCGGCTTGCCGATCCGGCTGGAAACGACCCGGCGATCGTCGTCGGCGAAAGCGGCGGGGTCGGGCTTGCCGGGCT
GATCCGCGCCGTCGGCAATCCCGAGATCCAGCAGGCATTGTCTCTCGATCGGCATTCCCGCATCTTCCTGGTCAACACCG
AAGGCGCGACCGACCCCGGCAAATATGAAGAGATCGTCGGGCTGTCGCCGGCCGCGGTCGCCCGAAAAGACAGGACTGGA
GCTTCAGCATGA

Upstream 100 bases:

>100_bases
GGCTCCAACGAAACAAAATTGCAAAACTAGGGCCGAAATACAGCGCCTTTTTCACTTCGCCTGCAATATGTTTTAGCCGA
ACAATTGAAACGAGGCGCTC

Downstream 100 bases:

>100_bases
GCCATCGTTCGATCGATCCTGCGCGTCTGCTCGGACGCATCGCCGAGCTCGGCGCGATCGGCCGCGATGCCGAGGGAAGG
CTTGTCCGCTTGGCGGCGTC

Product: diaminopropionate ammonia-lyase

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MFLLNTNADYRQPLDPRDAEILGIEAADAVERHLTFRENHAETPLVALPALAAELGVGSIHVKDEGHRLGLGSFKALGGA
YAVIRLVLEEAARRLGRAVDVSELHSFNVREVAETMTVACATDGNHGRSVAQGAQLVGARAAIFVHAGVSDERVAAIARF
GAEMIRVDGTYDDSVREAARIAEEKGWTIVSDTSWPGYERIPGLVMQGYTALVREALRAMPQPPTHVFIQAGVGGIAATV
AGHMAIAFGDNRPTFTVVDPARAACLFETARAGHPVTVAHGEPTVMAMLECYEPSLVAWRILSRVADAFMTVEEDEAIAV
MRRLADPAGNDPAIVVGESGGVGLAGLIRAVGNPEIQQALSLDRHSRIFLVNTEGATDPGKYEEIVGLSPAAVARKDRTG
ASA

Sequences:

>Translated_403_residues
MFLLNTNADYRQPLDPRDAEILGIEAADAVERHLTFRENHAETPLVALPALAAELGVGSIHVKDEGHRLGLGSFKALGGA
YAVIRLVLEEAARRLGRAVDVSELHSFNVREVAETMTVACATDGNHGRSVAQGAQLVGARAAIFVHAGVSDERVAAIARF
GAEMIRVDGTYDDSVREAARIAEEKGWTIVSDTSWPGYERIPGLVMQGYTALVREALRAMPQPPTHVFIQAGVGGIAATV
AGHMAIAFGDNRPTFTVVDPARAACLFETARAGHPVTVAHGEPTVMAMLECYEPSLVAWRILSRVADAFMTVEEDEAIAV
MRRLADPAGNDPAIVVGESGGVGLAGLIRAVGNPEIQQALSLDRHSRIFLVNTEGATDPGKYEEIVGLSPAAVARKDRTG
ASA
>Mature_403_residues
MFLLNTNADYRQPLDPRDAEILGIEAADAVERHLTFRENHAETPLVALPALAAELGVGSIHVKDEGHRLGLGSFKALGGA
YAVIRLVLEEAARRLGRAVDVSELHSFNVREVAETMTVACATDGNHGRSVAQGAQLVGARAAIFVHAGVSDERVAAIARF
GAEMIRVDGTYDDSVREAARIAEEKGWTIVSDTSWPGYERIPGLVMQGYTALVREALRAMPQPPTHVFIQAGVGGIAATV
AGHMAIAFGDNRPTFTVVDPARAACLFETARAGHPVTVAHGEPTVMAMLECYEPSLVAWRILSRVADAFMTVEEDEAIAV
MRRLADPAGNDPAIVVGESGGVGLAGLIRAVGNPEIQQALSLDRHSRIFLVNTEGATDPGKYEEIVGLSPAAVARKDRTG
ASA

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=359, Percent_Identity=40.9470752089136, Blast_Score=261, Evalue=8e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 42749; Mature: 42749

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLNTNADYRQPLDPRDAEILGIEAADAVERHLTFRENHAETPLVALPALAAELGVGSI
CEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEE
HVKDEGHRLGLGSFKALGGAYAVIRLVLEEAARRLGRAVDVSELHSFNVREVAETMTVAC
EEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHEEEE
ATDGNHGRSVAQGAQLVGARAAIFVHAGVSDERVAAIARFGAEMIRVDGTYDDSVREAAR
ECCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHH
IAEEKGWTIVSDTSWPGYERIPGLVMQGYTALVREALRAMPQPPTHVFIQAGVGGIAATV
HHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
AGHMAIAFGDNRPTFTVVDPARAACLFETARAGHPVTVAHGEPTVMAMLECYEPSLVAWR
HHCEEEEECCCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHH
ILSRVADAFMTVEEDEAIAVMRRLADPAGNDPAIVVGESGGVGLAGLIRAVGNPEIQQAL
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHH
SLDRHSRIFLVNTEGATDPGKYEEIVGLSPAAVARKDRTGASA
CCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MFLLNTNADYRQPLDPRDAEILGIEAADAVERHLTFRENHAETPLVALPALAAELGVGSI
CEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEE
HVKDEGHRLGLGSFKALGGAYAVIRLVLEEAARRLGRAVDVSELHSFNVREVAETMTVAC
EEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHEEEE
ATDGNHGRSVAQGAQLVGARAAIFVHAGVSDERVAAIARFGAEMIRVDGTYDDSVREAAR
ECCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHH
IAEEKGWTIVSDTSWPGYERIPGLVMQGYTALVREALRAMPQPPTHVFIQAGVGGIAATV
HHHHCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH
AGHMAIAFGDNRPTFTVVDPARAACLFETARAGHPVTVAHGEPTVMAMLECYEPSLVAWR
HHCEEEEECCCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCHHHHHH
ILSRVADAFMTVEEDEAIAVMRRLADPAGNDPAIVVGESGGVGLAGLIRAVGNPEIQQAL
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHH
SLDRHSRIFLVNTEGATDPGKYEEIVGLSPAAVARKDRTGASA
CCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]