| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548225
Identifier: 209548225
GI number: 209548225
Start: 642325
End: 642810
Strand: Direct
Name: 209548225
Synonym: Rleg2_0619
Alternate gene names: NA
Gene position: 642325-642810 (Clockwise)
Preceding gene: 209548224
Following gene: 209548226
Centisome position: 14.15
GC content: 64.61
Gene sequence:
>486_bases ATGACCATCGCGATCGGCGACAAGCTTCCTGCCGCCACTTTCAAGGAAAAGACCGCCGACGGCCCGGTCGAAATCACCAC CGAGCAGCTGTTCTCTGGCAAGCGCGTCGTGCTGTTTGCCGTGCCCGGCGCCTTCACGCCCACCTGCTCGCTGAACCACC TGCCGGGTTATCTCGAAAACCGCGACACCATCCTCGGCAAGGGCGTCGACGACATCGCTGTCATCGCCGTGAATGACTGG CACGTGATGGGCGCCTGGGCGCAATCCTCCGGCGGCCTGGGCAAGATCCACTTCCTCGCCGATTGGGACGCCGCTTTCAC CAAGGCCGTCGGCCTCGACGCCGACCTCTCCGGCGGCGGCCTCGGTCTGCGCTCCAAGCGCTATTCGATGCTGGTGGAAG ACGGCGTGGTCAAAGCCCTCAACGTCGAGGAAAGCCCTGGCCAGGCCACGGTTTCTGGTGCTGCGGCGATGCTGGAACTG CTCTGA
Upstream 100 bases:
>100_bases TTTGACTGACCGGCTCTTATAGTCGCGGCAGAGCCCCTGCGGCGCCCCCCGCCCAGCCGGAATCCCAAAACCCAAAAAAC CGGAACTCAAGGAGAAGATC
Downstream 100 bases:
>100_bases GTTTTCATTCCGAGAGATGAAGGGGCGGCCATTCGGTCGCCCTTTTCAATTGTTGTTGCGCCGCTCGTTATGTTGGGAAG CGCCCTCCTTCCTTTCAGGC
Product: redoxin
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTIAIGDKLPAATFKEKTADGPVEITTEQLFSGKRVVLFAVPGAFTPTCSLNHLPGYLENRDTILGKGVDDIAVIAVNDW HVMGAWAQSSGGLGKIHFLADWDAAFTKAVGLDADLSGGGLGLRSKRYSMLVEDGVVKALNVEESPGQATVSGAAAMLEL L
Sequences:
>Translated_161_residues MTIAIGDKLPAATFKEKTADGPVEITTEQLFSGKRVVLFAVPGAFTPTCSLNHLPGYLENRDTILGKGVDDIAVIAVNDW HVMGAWAQSSGGLGKIHFLADWDAAFTKAVGLDADLSGGGLGLRSKRYSMLVEDGVVKALNVEESPGQATVSGAAAMLEL L >Mature_160_residues TIAIGDKLPAATFKEKTADGPVEITTEQLFSGKRVVLFAVPGAFTPTCSLNHLPGYLENRDTILGKGVDDIAVIAVNDWH VMGAWAQSSGGLGKIHFLADWDAAFTKAVGLDADLSGGGLGLRSKRYSMLVEDGVVKALNVEESPGQATVSGAAAMLELL
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=143, Percent_Identity=44.7552447552448, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6323138, Length=178, Percent_Identity=32.5842696629214, Blast_Score=81, Evalue=9e-17, Organism=Drosophila melanogaster, GI78706776, Length=143, Percent_Identity=48.2517482517483, Blast_Score=127, Evalue=3e-30, Organism=Drosophila melanogaster, GI78709078, Length=143, Percent_Identity=48.2517482517483, Blast_Score=127, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR011906 - InterPro: IPR014025 - InterPro: IPR013740 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin; PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16843; Mature: 16712
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAIGDKLPAATFKEKTADGPVEITTEQLFSGKRVVLFAVPGAFTPTCSLNHLPGYLEN CEEEECCCCCCCCCCCCCCCCCEEEEHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCC RDTILGKGVDDIAVIAVNDWHVMGAWAQSSGGLGKIHFLADWDAAFTKAVGLDADLSGGG CCEEEECCCCCEEEEEECCEEEEEEEECCCCCEEEEEEEEECCHHHHHHHCCCCCCCCCC LGLRSKRYSMLVEDGVVKALNVEESPGQATVSGAAAMLELL CCCCCCHHEEEECCCEEEEEECCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure TIAIGDKLPAATFKEKTADGPVEITTEQLFSGKRVVLFAVPGAFTPTCSLNHLPGYLEN EEEECCCCCCCCCCCCCCCCCEEEEHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCC RDTILGKGVDDIAVIAVNDWHVMGAWAQSSGGLGKIHFLADWDAAFTKAVGLDADLSGGG CCEEEECCCCCEEEEEECCEEEEEEEECCCCCEEEEEEEEECCHHHHHHHCCCCCCCCCC LGLRSKRYSMLVEDGVVKALNVEESPGQATVSGAAAMLELL CCCCCCHHEEEECCCEEEEEECCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]