| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548179
Identifier: 209548179
GI number: 209548179
Start: 596546
End: 597970
Strand: Direct
Name: 209548179
Synonym: Rleg2_0573
Alternate gene names: NA
Gene position: 596546-597970 (Clockwise)
Preceding gene: 209548177
Following gene: 209548180
Centisome position: 13.15
GC content: 62.74
Gene sequence:
>1425_bases ATGCCTGAAGCTTCTTTCTTCACCGACATGTTGCAAAGCATTACCGATCACGGACGCCAGCTTCTGTTTTCCGGCTCGCG CAACACCCAGGCCGCAGCCAAAGCCGATCTGCAGACTCTCTGCGAGATGCTGTTGTCGAGCCGGGGTGAAGCATCCGGCA TGGCCCTTGCGGCCGAGATACTCGATCGCTGGGGCGGGCTCGAAAGCGCGGGCGCGCAGCAATTCTTCCATATGCTTCAC GAAACGTTCGGGCCCGACACGGTGCGGCTCGACCAGGCGATGGAAAATTACCGCACTGACAAAAGCTCTGCCGCCGTCAT CGCGCTCCATCAGGCCGCCGAGCCGCGGCGGCAGGAGCTCCTGCGCCGCTTGAATCACGCGCCGAACGGCACCGCCAGGC TGGTCCGTATGCGTCAGCAGCTGCTTGCTTCCAAGGACCGGTCCGAAGCCTATCACGCGCTCGATGCCGATTTCACGCAT CTGTTCGGCTCCTGGTTCAATCGTGGCTTTCTGACGCTGCGGCCGATCGACTGGTCGACGCCGGCAAACATCCTCGAAAA GATCATCAAATACGAGGCCGTGCATGAGATCGCCAGCTGGGAGGAGTTGCGCCGCCGGCTGGCGCCGGCCGACCGTCGAT GCTTTGCCTTTTTCCATCCCCGATTGGCCGAAGAACCGCTGGTGTTCGTCGAGGTGGCGCTCACCCGATCCGTGCCCAAT GCGATCGCAGATGTCCTCGACGAGGGGAGGGAGCAGATCAATGCCGATGAGGCGACGACGGCTGTCTTCTACTCGATCTC CAACTGCCAGGATGGCCTGCGCGGAATCTCGTTCGGCAATTTCTTGATCAAGCAGGTCGTGGAAGACCTGCGCCGGGACC TACCGGGCCTGAAGAATTTCGTCACGCTGTCGCCTGTCCCGGGCTTTGCCCGCTGGCTTGCCAAGGCGCGCGATCCGGCC GGCGCCCGGTCCTTGTCCAAAGCGGCCCTGGAAACGCTGAACCTGCTGGACGACCCGAACTGGCCCGACGAGGAGAAGAG CAGGACCGAATTGGAGCGCGTGTTGCTGCCGCTTGCGGCGCGCTACTTCCTGACCGAACGAACGCCTGAGGGCCGCCCGG TCGATCCCGTCGCCCGCTTCCATCTCGGCAACGGCGCTCGGCTCGAAAGAGTGAATTTTCTCGGCGACCGATCGCAGAAG GCAGTCCAGCAGGCCCACGGCCTGATGGTCAACTACCTCTATAAGCTCGACGACATCGTGGCCAATCACGAGGCCTTAGC GCAGCGCGGCGAAGTGATCGCCTCGCCAGCCGTCAAAAGCCTGCTCAACCAGAACGACGAAGGCCGTCGCGGCGGCAACG GCCAGCAAGGCTCTCGGGCCTTCGCGCAGATCATGAACTCAACGCTTGGAGGAGGGCGAAAGTGA
Upstream 100 bases:
>100_bases AAGAATGACAATCTACATACTACAGACGAAGCCCTTTGATGGGAAGCAGGGTCCAAGGCGGCGCACAATGCGGCCGGCCT TCAAGAGAGGGGAGAATGGC
Downstream 100 bases:
>100_bases GCAACCATCTTTTCGACGCGATGCGGGCCGCTGCGCCCGGCAACGCACCGTTCATGCGGATCGGCGCCGCTCAGACATGG ACCTATGGCGACGCTTTTGC
Product: Malonyl-CoA decarboxylase
Products: NA
Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MPEASFFTDMLQSITDHGRQLLFSGSRNTQAAAKADLQTLCEMLLSSRGEASGMALAAEILDRWGGLESAGAQQFFHMLH ETFGPDTVRLDQAMENYRTDKSSAAVIALHQAAEPRRQELLRRLNHAPNGTARLVRMRQQLLASKDRSEAYHALDADFTH LFGSWFNRGFLTLRPIDWSTPANILEKIIKYEAVHEIASWEELRRRLAPADRRCFAFFHPRLAEEPLVFVEVALTRSVPN AIADVLDEGREQINADEATTAVFYSISNCQDGLRGISFGNFLIKQVVEDLRRDLPGLKNFVTLSPVPGFARWLAKARDPA GARSLSKAALETLNLLDDPNWPDEEKSRTELERVLLPLAARYFLTERTPEGRPVDPVARFHLGNGARLERVNFLGDRSQK AVQQAHGLMVNYLYKLDDIVANHEALAQRGEVIASPAVKSLLNQNDEGRRGGNGQQGSRAFAQIMNSTLGGGRK
Sequences:
>Translated_474_residues MPEASFFTDMLQSITDHGRQLLFSGSRNTQAAAKADLQTLCEMLLSSRGEASGMALAAEILDRWGGLESAGAQQFFHMLH ETFGPDTVRLDQAMENYRTDKSSAAVIALHQAAEPRRQELLRRLNHAPNGTARLVRMRQQLLASKDRSEAYHALDADFTH LFGSWFNRGFLTLRPIDWSTPANILEKIIKYEAVHEIASWEELRRRLAPADRRCFAFFHPRLAEEPLVFVEVALTRSVPN AIADVLDEGREQINADEATTAVFYSISNCQDGLRGISFGNFLIKQVVEDLRRDLPGLKNFVTLSPVPGFARWLAKARDPA GARSLSKAALETLNLLDDPNWPDEEKSRTELERVLLPLAARYFLTERTPEGRPVDPVARFHLGNGARLERVNFLGDRSQK AVQQAHGLMVNYLYKLDDIVANHEALAQRGEVIASPAVKSLLNQNDEGRRGGNGQQGSRAFAQIMNSTLGGGRK >Mature_473_residues PEASFFTDMLQSITDHGRQLLFSGSRNTQAAAKADLQTLCEMLLSSRGEASGMALAAEILDRWGGLESAGAQQFFHMLHE TFGPDTVRLDQAMENYRTDKSSAAVIALHQAAEPRRQELLRRLNHAPNGTARLVRMRQQLLASKDRSEAYHALDADFTHL FGSWFNRGFLTLRPIDWSTPANILEKIIKYEAVHEIASWEELRRRLAPADRRCFAFFHPRLAEEPLVFVEVALTRSVPNA IADVLDEGREQINADEATTAVFYSISNCQDGLRGISFGNFLIKQVVEDLRRDLPGLKNFVTLSPVPGFARWLAKARDPAG ARSLSKAALETLNLLDDPNWPDEEKSRTELERVLLPLAARYFLTERTPEGRPVDPVARFHLGNGARLERVNFLGDRSQKA VQQAHGLMVNYLYKLDDIVANHEALAQRGEVIASPAVKSLLNQNDEGRRGGNGQQGSRAFAQIMNSTLGGGRK
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI110349750, Length=421, Percent_Identity=31.5914489311164, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71985309, Length=391, Percent_Identity=29.4117647058824, Blast_Score=187, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52896; Mature: 52764
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEASFFTDMLQSITDHGRQLLFSGSRNTQAAAKADLQTLCEMLLSSRGEASGMALAAEI CCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDRWGGLESAGAQQFFHMLHETFGPDTVRLDQAMENYRTDKSSAAVIALHQAAEPRRQEL HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHCCHHHHHH LRRLNHAPNGTARLVRMRQQLLASKDRSEAYHALDADFTHLFGSWFNRGFLTLRPIDWST HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC PANILEKIIKYEAVHEIASWEELRRRLAPADRRCFAFFHPRLAEEPLVFVEVALTRSVPN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEHHHHHHHHHCHH AIADVLDEGREQINADEATTAVFYSISNCQDGLRGISFGNFLIKQVVEDLRRDLPGLKNF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCC VTLSPVPGFARWLAKARDPAGARSLSKAALETLNLLDDPNWPDEEKSRTELERVLLPLAA EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH RYFLTERTPEGRPVDPVARFHLGNGARLERVNFLGDRSQKAVQQAHGLMVNYLYKLDDIV HHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ANHEALAQRGEVIASPAVKSLLNQNDEGRRGGNGQQGSRAFAQIMNSTLGGGRK HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PEASFFTDMLQSITDHGRQLLFSGSRNTQAAAKADLQTLCEMLLSSRGEASGMALAAEI CCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LDRWGGLESAGAQQFFHMLHETFGPDTVRLDQAMENYRTDKSSAAVIALHQAAEPRRQEL HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEEHHHHCCHHHHHH LRRLNHAPNGTARLVRMRQQLLASKDRSEAYHALDADFTHLFGSWFNRGFLTLRPIDWST HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC PANILEKIIKYEAVHEIASWEELRRRLAPADRRCFAFFHPRLAEEPLVFVEVALTRSVPN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEHHHHHHHHHCHH AIADVLDEGREQINADEATTAVFYSISNCQDGLRGISFGNFLIKQVVEDLRRDLPGLKNF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCC VTLSPVPGFARWLAKARDPAGARSLSKAALETLNLLDDPNWPDEEKSRTELERVLLPLAA EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH RYFLTERTPEGRPVDPVARFHLGNGARLERVNFLGDRSQKAVQQAHGLMVNYLYKLDDIV HHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ANHEALAQRGEVIASPAVKSLLNQNDEGRRGGNGQQGSRAFAQIMNSTLGGGRK HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA